RNA–Protein interactions for RNA: ENST00000483926.5

SYTL1-204, Transcript of synaptotagmin like 1, humanhuman

TSL 2

Gene SYTL1, Length 2,525 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYTL1-204ENST00000483926 NISCHQ9Y2I1 1504 aa38.37■■■■□ 3.73
SYTL1-204ENST00000483926 CCDC180Q9P1Z9 1646 aa32.74■■■□□ 2.83
SYTL1-204ENST00000483926 ZCCHC6Q5VYS8 1495 aaKnown RBP32.46■■■□□ 2.79
SYTL1-204ENST00000483926 SHROOM4Q9ULL8 1493 aa32.43■■■□□ 2.78
SYTL1-204ENST00000483926 SUPT5HO00267 1087 aaKnown RBP31.77■■■□□ 2.68
SYTL1-204ENST00000483926 DCAF8L2P0C7V8 631 aa31.6■■■□□ 2.65
SYTL1-204ENST00000483926 DCAF1Q9Y4B6 1507 aa31.59■■■□□ 2.65
SYTL1-204ENST00000483926 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.54
SYTL1-204ENST00000483926 ABCC9O60706 1549 aa30.81■■■□□ 2.52
SYTL1-204ENST00000483926 MYO15BQ96JP2 1530 aa30.77■■■□□ 2.52
SYTL1-204ENST00000483926 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
SYTL1-204ENST00000483926 RSF1Q96T23 1441 aaPredicted RBP30.3■■■□□ 2.44
SYTL1-204ENST00000483926 NACADO15069 1562 aa30.27■■■□□ 2.44
SYTL1-204ENST00000483926 RB1CC1Q8TDY2 1594 aa29.98■■■□□ 2.39
SYTL1-204ENST00000483926 HRCP23327 699 aa29.98■■■□□ 2.39
SYTL1-204ENST00000483926 LOC105371045A0A1W2PR82 267 aa29.94■■■□□ 2.38
SYTL1-204ENST00000483926 CECR2Q9BXF3 1484 aa29.86■■■□□ 2.37
SYTL1-204ENST00000483926 PCGF6Q9BYE7 350 aa29.8■■■□□ 2.36
SYTL1-204ENST00000483926 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
SYTL1-204ENST00000483926 TRIM41Q8WV44 630 aa29.68■■■□□ 2.34
SYTL1-204ENST00000483926 WIZO95785 1651 aa29.6■■■□□ 2.33
SYTL1-204ENST00000483926 BAZ1AQ9NRL2 1556 aaPredicted RBP29.49■■■□□ 2.31
SYTL1-204ENST00000483926 UNC13AQ9UPW8 1703 aa29.44■■■□□ 2.3
SYTL1-204ENST00000483926 PPARGC1BQ86YN6 1023 aaKnown RBP29.37■■■□□ 2.29
SYTL1-204ENST00000483926 TRIM26Q12899 539 aaPredicted RBP29.36■■■□□ 2.29
SYTL1-204ENST00000483926 FAM9AQ8IZU1 332 aaPredicted RBP29.32■■■□□ 2.28
SYTL1-204ENST00000483926 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
SYTL1-204ENST00000483926 SMARCA4P51532 1647 aa29.24■■■□□ 2.27
SYTL1-204ENST00000483926 TOP2AP11388 1531 aaKnown RBP29.2■■■□□ 2.27
SYTL1-204ENST00000483926 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.253e-6■■□□□ 12.4
SYTL1-204ENST00000483926 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
SYTL1-204ENST00000483926 CCDC88BA6NC98 1476 aa29.03■■■□□ 2.24
SYTL1-204ENST00000483926 SMARCA2P51531 1590 aa29.02■■■□□ 2.24
SYTL1-204ENST00000483926 EHMT2Q96KQ7 1210 aa28.98■■■□□ 2.23
SYTL1-204ENST00000483926 PELP1Q8IZL8 1130 aaKnown RBP28.93■■■□□ 2.22
SYTL1-204ENST00000483926 ABCC8Q09428 1581 aa28.88■■■□□ 2.21
SYTL1-204ENST00000483926 PEG3Q9GZU2 1588 aa28.76■■■□□ 2.19
SYTL1-204ENST00000483926 ZEB1P37275 1124 aaPredicted RBP28.71■■■□□ 2.19
SYTL1-204ENST00000483926 SOGA1O94964 1423 aa28.59■■■□□ 2.17
SYTL1-204ENST00000483926 EEA1Q15075 1411 aa28.55■■■□□ 2.16
SYTL1-204ENST00000483926 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
SYTL1-204ENST00000483926 WRNQ14191 1432 aaPredicted RBP eCLIP28.46■■■□□ 2.15
SYTL1-204ENST00000483926 TNIKQ9UKE5 1360 aa28.45■■■□□ 2.15
SYTL1-204ENST00000483926 CSRNP3Q8WYN3 585 aa28.45■■■□□ 2.15
SYTL1-204ENST00000483926 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.14
SYTL1-204ENST00000483926 CEP162Q5TB80 1403 aa28.45■■■□□ 2.14
SYTL1-204ENST00000483926 BAZ1BQ9UIG0 1483 aaKnown RBP28.4■■■□□ 2.14
SYTL1-204ENST00000483926 SCAF1Q9H7N4 1312 aaKnown RBP28.39■■■□□ 2.13
SYTL1-204ENST00000483926 SYNJ1O43426 1573 aa28.32■■■□□ 2.12
SYTL1-204ENST00000483926 GOLGA3Q08378 1498 aa28.3■■■□□ 2.12
SYTL1-204ENST00000483926 UBTFP17480 764 aaKnown RBP28.26■■■□□ 2.11
SYTL1-204ENST00000483926 CEP164Q9UPV0 1460 aa28.16■■■□□ 2.1
SYTL1-204ENST00000483926 KIF21BO75037 1637 aa28.15■■■□□ 2.1
SYTL1-204ENST00000483926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.12■■■□□ 2.09
SYTL1-204ENST00000483926 CCER1Q8TC90 406 aaPredicted RBP28.06■■■□□ 2.08
SYTL1-204ENST00000483926 TTBK1Q5TCY1 1321 aaPredicted RBP28.04■■■□□ 2.08
SYTL1-204ENST00000483926 TOP2BQ02880 1626 aa28.03■■■□□ 2.08
SYTL1-204ENST00000483926 HMGXB3Q12766 1538 aa28.01■■■□□ 2.07
SYTL1-204ENST00000483926 NCAPD3P42695 1498 aa28■■■□□ 2.07
SYTL1-204ENST00000483926 BIVM-ERCC5R4GMW8 1640 aa27.94■■■□□ 2.06
SYTL1-204ENST00000483926 CLIP1P30622 1438 aa27.94■■■□□ 2.06
SYTL1-204ENST00000483926 RAPGEF2Q9Y4G8 1499 aa27.92■■■□□ 2.06
SYTL1-204ENST00000483926 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
SYTL1-204ENST00000483926 CC2D2AQ9P2K1 1620 aa27.82■■■□□ 2.04
SYTL1-204ENST00000483926 MYT1Q01538 1121 aa27.79■■■□□ 2.04
SYTL1-204ENST00000483926 CFTRP13569 1480 aa27.74■■■□□ 2.03
SYTL1-204ENST00000483926 CUX1P39880 1505 aa27.74■■■□□ 2.03
SYTL1-204ENST00000483926 ERICH3Q5RHP9 1530 aa27.73■■■□□ 2.03
SYTL1-204ENST00000483926 PRXQ9BXM0 1461 aa27.73■■■□□ 2.03
SYTL1-204ENST00000483926 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
SYTL1-204ENST00000483926 APLP2Q06481 763 aa27.63■■■□□ 2.01
SYTL1-204ENST00000483926 NEUROD1Q13562 356 aa27.6■■■□□ 2.01
SYTL1-204ENST00000483926 KIF27Q86VH2 1401 aa27.6■■■□□ 2.01
SYTL1-204ENST00000483926 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
SYTL1-204ENST00000483926 PRDM2Q13029 1718 aa27.54■■■□□ 2
SYTL1-204ENST00000483926 HNRNPUL2Q1KMD3 747 aaKnown RBP27.53■■■□□ 2
SYTL1-204ENST00000483926 ARAP1Q96P48 1450 aa27.52■■■□□ 2
SYTL1-204ENST00000483926 DIEXFQ68CQ4 756 aaKnown RBP27.47■■□□□ 1.99
SYTL1-204ENST00000483926 GTF3C3Q9Y5Q9 886 aa27.46■■□□□ 1.99
SYTL1-204ENST00000483926 CADPSQ9ULU8 1353 aa27.42■■□□□ 1.98
SYTL1-204ENST00000483926 DNAJC5BQ9UF47 199 aa27.34■■□□□ 1.97
SYTL1-204ENST00000483926 ZNF316A6NFI3 1004 aaPredicted RBP27.33■■□□□ 1.97
SYTL1-204ENST00000483926 CENPBP07199 599 aaPredicted RBP27.33■■□□□ 1.97
SYTL1-204ENST00000483926 CUX2O14529 1486 aa27.32■■□□□ 1.96
SYTL1-204ENST00000483926 IGF1RP08069 1367 aa27.3■■□□□ 1.96
SYTL1-204ENST00000483926 ARHGAP35Q9NRY4 1499 aa27.3■■□□□ 1.96
SYTL1-204ENST00000483926 KANK4Q5T7N3 995 aaPredicted RBP27.29■■□□□ 1.96
SYTL1-204ENST00000483926 FGD5Q6ZNL6 1462 aa27.25■■□□□ 1.95
SYTL1-204ENST00000483926 RRBP1Q9P2E9 1410 aaKnown RBP27.2■■□□□ 1.94
SYTL1-204ENST00000483926 CARMIL1Q5VZK9 1371 aa27.17■■□□□ 1.94
SYTL1-204ENST00000483926 FANCD2Q9BXW9 1451 aa27.14■■□□□ 1.94
SYTL1-204ENST00000483926 CLSPNQ9HAW4 1339 aa27.13■■□□□ 1.93
SYTL1-204ENST00000483926 DHX57Q6P158 1386 aaKnown RBP27.1■■□□□ 1.93
SYTL1-204ENST00000483926 NESP48681 1621 aa27.07■■□□□ 1.92
SYTL1-204ENST00000483926 CCNB3Q8WWL7 1395 aa27.05■■□□□ 1.92
SYTL1-204ENST00000483926 MAP3K1Q13233 1512 aa27.04■■□□□ 1.92
SYTL1-204ENST00000483926 DNMBPQ6XZF7 1577 aa27.04■■□□□ 1.92
SYTL1-204ENST00000483926 TIAM1Q13009 1591 aa27■■□□□ 1.91
SYTL1-204ENST00000483926 ABCA10Q8WWZ4 1543 aa26.98■■□□□ 1.91
SYTL1-204ENST00000483926 TOPBP1Q92547 1522 aa26.97■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms