RNA–Protein interactions for RNA: ENST00000537784.5

CACNA2D4-206, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 1 (best)

Gene CACNA2D4, Length 2,876 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-206ENST00000537784 NISCHQ9Y2I1 1504 aa24■■□□□ 1.43
CACNA2D4-206ENST00000537784 SHROOM4Q9ULL8 1493 aa20.42■□□□□ 0.86
CACNA2D4-206ENST00000537784 CCDC180Q9P1Z9 1646 aa20.41■□□□□ 0.86
CACNA2D4-206ENST00000537784 ZCCHC6Q5VYS8 1495 aaKnown RBP20.31■□□□□ 0.84
CACNA2D4-206ENST00000537784 SUPT5HO00267 1087 aaKnown RBP20.2■□□□□ 0.83
CACNA2D4-206ENST00000537784 HRCP23327 699 aa20.19■□□□□ 0.82
CACNA2D4-206ENST00000537784 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
CACNA2D4-206ENST00000537784 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
CACNA2D4-206ENST00000537784 DCAF8L2P0C7V8 631 aa19.85■□□□□ 0.77
CACNA2D4-206ENST00000537784 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
CACNA2D4-206ENST00000537784 DCAF1Q9Y4B6 1507 aa19.7■□□□□ 0.74
CACNA2D4-206ENST00000537784 PPARGC1BQ86YN6 1023 aaKnown RBP19.67■□□□□ 0.74
CACNA2D4-206ENST00000537784 LOC105371045A0A1W2PR82 267 aa19.34■□□□□ 0.69
CACNA2D4-206ENST00000537784 TRIM26Q12899 539 aaPredicted RBP19.32■□□□□ 0.68
CACNA2D4-206ENST00000537784 PELP1Q8IZL8 1130 aaKnown RBP19.23■□□□□ 0.67
CACNA2D4-206ENST00000537784 ABCC9O60706 1549 aa19.16■□□□□ 0.66
CACNA2D4-206ENST00000537784 SCRIBQ14160 1630 aa19.14■□□□□ 0.65
CACNA2D4-206ENST00000537784 ZEB1P37275 1124 aaPredicted RBP19.12■□□□□ 0.65
CACNA2D4-206ENST00000537784 RSF1Q96T23 1441 aaPredicted RBP18.98■□□□□ 0.63
CACNA2D4-206ENST00000537784 SCAF1Q9H7N4 1312 aaKnown RBP18.93■□□□□ 0.62
CACNA2D4-206ENST00000537784 NACADO15069 1562 aa18.87■□□□□ 0.61
CACNA2D4-206ENST00000537784 RB1CC1Q8TDY2 1594 aa18.79■□□□□ 0.6
CACNA2D4-206ENST00000537784 TRIM41Q8WV44 630 aa18.78■□□□□ 0.6
CACNA2D4-206ENST00000537784 MYT1Q01538 1121 aa18.75■□□□□ 0.59
CACNA2D4-206ENST00000537784 CECR2Q9BXF3 1484 aa18.73■□□□□ 0.59
CACNA2D4-206ENST00000537784 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
CACNA2D4-206ENST00000537784 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.58
CACNA2D4-206ENST00000537784 ACIN1Q9UKV3 1341 aaKnown RBP18.56■□□□□ 0.56
CACNA2D4-206ENST00000537784 WIZO95785 1651 aa18.56■□□□□ 0.56
CACNA2D4-206ENST00000537784 NEUROD1Q13562 356 aa18.48■□□□□ 0.55
CACNA2D4-206ENST00000537784 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
CACNA2D4-206ENST00000537784 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
CACNA2D4-206ENST00000537784 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.43■□□□□ 0.54
CACNA2D4-206ENST00000537784 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
CACNA2D4-206ENST00000537784 CENPBP07199 599 aaPredicted RBP18.35■□□□□ 0.53
CACNA2D4-206ENST00000537784 DIEXFQ68CQ4 756 aaKnown RBP18.35■□□□□ 0.53
CACNA2D4-206ENST00000537784 GTF3C3Q9Y5Q9 886 aa18.35■□□□□ 0.53
CACNA2D4-206ENST00000537784 EIF4G1Q04637 1599 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-206ENST00000537784 UNC13AQ9UPW8 1703 aa18.32■□□□□ 0.52
CACNA2D4-206ENST00000537784 SMARCA4P51532 1647 aa18.29■□□□□ 0.52
CACNA2D4-206ENST00000537784 TOP2AP11388 1531 aaKnown RBP18.26■□□□□ 0.51
CACNA2D4-206ENST00000537784 WRNQ14191 1432 aaPredicted RBP eCLIP18.24■□□□□ 0.51
CACNA2D4-206ENST00000537784 CCDC88BA6NC98 1476 aa18.19■□□□□ 0.5
CACNA2D4-206ENST00000537784 SMARCA2P51531 1590 aa18.17■□□□□ 0.5
CACNA2D4-206ENST00000537784 ABCC8Q09428 1581 aa18.14■□□□□ 0.49
CACNA2D4-206ENST00000537784 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
CACNA2D4-206ENST00000537784 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
CACNA2D4-206ENST00000537784 PABPN1Q86U42 306 aaKnown RBP eCLIP18.09■□□□□ 0.49
CACNA2D4-206ENST00000537784 ZNF316A6NFI3 1004 aaPredicted RBP18.09■□□□□ 0.49
CACNA2D4-206ENST00000537784 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
CACNA2D4-206ENST00000537784 TTBK1Q5TCY1 1321 aaPredicted RBP18.02■□□□□ 0.47
CACNA2D4-206ENST00000537784 SOGA1O94964 1423 aa17.96■□□□□ 0.47
CACNA2D4-206ENST00000537784 PEG3Q9GZU2 1588 aa17.95■□□□□ 0.46
CACNA2D4-206ENST00000537784 EEA1Q15075 1411 aa17.93■□□□□ 0.46
CACNA2D4-206ENST00000537784 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
CACNA2D4-206ENST00000537784 MIER1Q8N108 512 aa17.89■□□□□ 0.46
CACNA2D4-206ENST00000537784 RUSC2Q8N2Y8 1516 aa17.88■□□□□ 0.45
CACNA2D4-206ENST00000537784 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
CACNA2D4-206ENST00000537784 GOLGA3Q08378 1498 aa17.84■□□□□ 0.45
CACNA2D4-206ENST00000537784 ATAD2BQ9ULI0 1458 aa17.83■□□□□ 0.44
CACNA2D4-206ENST00000537784 UBTFP17480 764 aaKnown RBP17.81■□□□□ 0.44
CACNA2D4-206ENST00000537784 BAZ1BQ9UIG0 1483 aaKnown RBP17.77■□□□□ 0.43
CACNA2D4-206ENST00000537784 SYNJ1O43426 1573 aa17.76■□□□□ 0.43
CACNA2D4-206ENST00000537784 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
CACNA2D4-206ENST00000537784 KIF21BO75037 1637 aa17.71■□□□□ 0.43
CACNA2D4-206ENST00000537784 CEP164Q9UPV0 1460 aa17.68■□□□□ 0.42
CACNA2D4-206ENST00000537784 CLSPNQ9HAW4 1339 aa17.65■□□□□ 0.42
CACNA2D4-206ENST00000537784 VPS8Q8N3P4 1428 aa17.65■□□□□ 0.42
CACNA2D4-206ENST00000537784 CLIP1P30622 1438 aa17.64■□□□□ 0.41
CACNA2D4-206ENST00000537784 SUPT16HQ9Y5B9 1047 aaKnown RBP17.56■□□□□ 0.4
CACNA2D4-206ENST00000537784 TOP2BQ02880 1626 aa17.53■□□□□ 0.4
CACNA2D4-206ENST00000537784 RAPGEF2Q9Y4G8 1499 aa17.53■□□□□ 0.4
CACNA2D4-206ENST00000537784 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-206ENST00000537784 APLP2Q06481 763 aa17.51■□□□□ 0.39
CACNA2D4-206ENST00000537784 HMGXB3Q12766 1538 aa17.48■□□□□ 0.39
CACNA2D4-206ENST00000537784 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
CACNA2D4-206ENST00000537784 PRKCSHP14314 528 aaPredicted RBP17.47■□□□□ 0.39
CACNA2D4-206ENST00000537784 BIVM-ERCC5R4GMW8 1640 aa17.47■□□□□ 0.39
CACNA2D4-206ENST00000537784 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
CACNA2D4-206ENST00000537784 TSHZ2Q9NRE2 1034 aa17.43■□□□□ 0.38
CACNA2D4-206ENST00000537784 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
CACNA2D4-206ENST00000537784 CUX1P39880 1505 aa17.38■□□□□ 0.37
CACNA2D4-206ENST00000537784 PRXQ9BXM0 1461 aa17.36■□□□□ 0.37
CACNA2D4-206ENST00000537784 ANP32EQ9BTT0 268 aa17.36■□□□□ 0.37
CACNA2D4-206ENST00000537784 ARAP1Q96P48 1450 aa17.34■□□□□ 0.37
CACNA2D4-206ENST00000537784 CUX2O14529 1486 aa17.34■□□□□ 0.37
CACNA2D4-206ENST00000537784 ERICH3Q5RHP9 1530 aa17.34■□□□□ 0.37
CACNA2D4-206ENST00000537784 CFTRP13569 1480 aa17.33■□□□□ 0.37
CACNA2D4-206ENST00000537784 RRBP1Q9P2E9 1410 aaKnown RBP17.33■□□□□ 0.36
CACNA2D4-206ENST00000537784 KANK4Q5T7N3 995 aaPredicted RBP17.27■□□□□ 0.36
CACNA2D4-206ENST00000537784 KIF27Q86VH2 1401 aa17.26■□□□□ 0.35
CACNA2D4-206ENST00000537784 KCNH8Q96L42 1107 aa17.21■□□□□ 0.35
CACNA2D4-206ENST00000537784 CCNB3Q8WWL7 1395 aa17.19■□□□□ 0.34
CACNA2D4-206ENST00000537784 MAPKBP1O60336 1514 aa17.18■□□□□ 0.34
CACNA2D4-206ENST00000537784 PRDM2Q13029 1718 aa17.18■□□□□ 0.34
CACNA2D4-206ENST00000537784 CADPSQ9ULU8 1353 aa17.14■□□□□ 0.33
CACNA2D4-206ENST00000537784 ARHGAP35Q9NRY4 1499 aa17.12■□□□□ 0.33
CACNA2D4-206ENST00000537784 BCANQ96GW7 911 aa17.12■□□□□ 0.33
CACNA2D4-206ENST00000537784 RAB3GAP2Q9H2M9 1393 aa17.11■□□□□ 0.33
CACNA2D4-206ENST00000537784 FKBP8Q14318 412 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms