RNA–Protein interactions for RNA: ENST00000297185.7

HSPA9-201, Transcript of heat shock protein family A (Hsp70) member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSPA9, Length 3,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPA9-201ENST00000297185 NISCHQ9Y2I1 1504 aa22.28■■□□□ 1.16
HSPA9-201ENST00000297185 CCDC180Q9P1Z9 1646 aa19.13■□□□□ 0.65
HSPA9-201ENST00000297185 ZCCHC6Q5VYS8 1495 aaKnown RBP18.77■□□□□ 0.6
HSPA9-201ENST00000297185 SHROOM4Q9ULL8 1493 aa18.74■□□□□ 0.59
HSPA9-201ENST00000297185 DCAF8L2P0C7V8 631 aa18.64■□□□□ 0.57
HSPA9-201ENST00000297185 DCAF1Q9Y4B6 1507 aa18.3■□□□□ 0.52
HSPA9-201ENST00000297185 SUPT5HO00267 1087 aaKnown RBP18.25■□□□□ 0.51
HSPA9-201ENST00000297185 ABCC9O60706 1549 aa18.01■□□□□ 0.47
HSPA9-201ENST00000297185 MYO15BQ96JP2 1530 aa17.91■□□□□ 0.46
HSPA9-201ENST00000297185 SCRIBQ14160 1630 aa17.84■□□□□ 0.45
HSPA9-201ENST00000297185 NACADO15069 1562 aa17.79■□□□□ 0.44
HSPA9-201ENST00000297185 RB1CC1Q8TDY2 1594 aa17.58■□□□□ 0.4
HSPA9-201ENST00000297185 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
HSPA9-201ENST00000297185 RSF1Q96T23 1441 aaPredicted RBP17.49■□□□□ 0.39
HSPA9-201ENST00000297185 CECR2Q9BXF3 1484 aa17.38■□□□□ 0.37
HSPA9-201ENST00000297185 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
HSPA9-201ENST00000297185 UNC13AQ9UPW8 1703 aa17.2■□□□□ 0.34
HSPA9-201ENST00000297185 BAZ1AQ9NRL2 1556 aaPredicted RBP17.17■□□□□ 0.34
HSPA9-201ENST00000297185 WIZO95785 1651 aa17.16■□□□□ 0.34
HSPA9-201ENST00000297185 PABPN1Q86U42 306 aaKnown RBP eCLIP17.16■□□□□ 0.34
HSPA9-201ENST00000297185 TRIM41Q8WV44 630 aa17.06■□□□□ 0.32
HSPA9-201ENST00000297185 SMARCA4P51532 1647 aa17.04■□□□□ 0.32
HSPA9-201ENST00000297185 BICRAQ9NZM4 1560 aa17.03■□□□□ 0.32
HSPA9-201ENST00000297185 LOC105371045A0A1W2PR82 267 aa17■□□□□ 0.31
HSPA9-201ENST00000297185 TOP2AP11388 1531 aaKnown RBP16.93■□□□□ 0.3
HSPA9-201ENST00000297185 FAM9AQ8IZU1 332 aaPredicted RBP16.88■□□□□ 0.29
HSPA9-201ENST00000297185 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
HSPA9-201ENST00000297185 SMARCA2P51531 1590 aa16.81■□□□□ 0.28
HSPA9-201ENST00000297185 EIF4G1Q04637 1599 aaKnown RBP16.75■□□□□ 0.27
HSPA9-201ENST00000297185 EHMT2Q96KQ7 1210 aa16.72■□□□□ 0.27
HSPA9-201ENST00000297185 PEG3Q9GZU2 1588 aa16.72■□□□□ 0.27
HSPA9-201ENST00000297185 ATAD2BQ9ULI0 1458 aa16.7■□□□□ 0.26
HSPA9-201ENST00000297185 PCGF6Q9BYE7 350 aa16.66■□□□□ 0.26
HSPA9-201ENST00000297185 BAZ1BQ9UIG0 1483 aaKnown RBP16.66■□□□□ 0.26
HSPA9-201ENST00000297185 ABCC8Q09428 1581 aa16.66■□□□□ 0.26
HSPA9-201ENST00000297185 WRNQ14191 1432 aaPredicted RBP eCLIP16.48■□□□□ 0.23
HSPA9-201ENST00000297185 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
HSPA9-201ENST00000297185 NCAPD3P42695 1498 aa16.45■□□□□ 0.22
HSPA9-201ENST00000297185 SOGA1O94964 1423 aa16.44■□□□□ 0.22
HSPA9-201ENST00000297185 HRCP23327 699 aa16.41■□□□□ 0.22
HSPA9-201ENST00000297185 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
HSPA9-201ENST00000297185 CSRNP3Q8WYN3 585 aa16.39■□□□□ 0.21
HSPA9-201ENST00000297185 EEA1Q15075 1411 aa16.38■□□□□ 0.21
HSPA9-201ENST00000297185 RUSC2Q8N2Y8 1516 aa16.36■□□□□ 0.21
HSPA9-201ENST00000297185 SYNJ1O43426 1573 aa16.35■□□□□ 0.21
HSPA9-201ENST00000297185 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
HSPA9-201ENST00000297185 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
HSPA9-201ENST00000297185 TNIKQ9UKE5 1360 aa16.25■□□□□ 0.19
HSPA9-201ENST00000297185 CEP162Q5TB80 1403 aa16.23■□□□□ 0.19
HSPA9-201ENST00000297185 GOLGA3Q08378 1498 aa16.23■□□□□ 0.19
HSPA9-201ENST00000297185 CFTRP13569 1480 aa16.21■□□□□ 0.18
HSPA9-201ENST00000297185 TOP2BQ02880 1626 aa16.2■□□□□ 0.18
HSPA9-201ENST00000297185 CC2D2AQ9P2K1 1620 aa16.2■□□□□ 0.18
HSPA9-201ENST00000297185 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
HSPA9-201ENST00000297185 BIVM-ERCC5R4GMW8 1640 aa16.14■□□□□ 0.18
HSPA9-201ENST00000297185 CUX1P39880 1505 aa16.12■□□□□ 0.17
HSPA9-201ENST00000297185 CADPSQ9ULU8 1353 aa16.12■□□□□ 0.17
HSPA9-201ENST00000297185 KIF21BO75037 1637 aa16.12■□□□□ 0.17
HSPA9-201ENST00000297185 TTBK1Q5TCY1 1321 aaPredicted RBP16.1■□□□□ 0.17
HSPA9-201ENST00000297185 RAPGEF2Q9Y4G8 1499 aa16.07■□□□□ 0.16
HSPA9-201ENST00000297185 RANGAP1P46060 587 aaPredicted RBP16.05■□□□□ 0.16
HSPA9-201ENST00000297185 CLIP1P30622 1438 aa16.03■□□□□ 0.16
HSPA9-201ENST00000297185 PRDM2Q13029 1718 aa16.03■□□□□ 0.16
HSPA9-201ENST00000297185 KIF27Q86VH2 1401 aa16.03■□□□□ 0.16
HSPA9-201ENST00000297185 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
HSPA9-201ENST00000297185 PRXQ9BXM0 1461 aa15.96■□□□□ 0.14
HSPA9-201ENST00000297185 FANCD2Q9BXW9 1451 aa15.95■□□□□ 0.14
HSPA9-201ENST00000297185 ERICH3Q5RHP9 1530 aa15.93■□□□□ 0.14
HSPA9-201ENST00000297185 CUX2O14529 1486 aa15.93■□□□□ 0.14
HSPA9-201ENST00000297185 APLP2Q06481 763 aa15.92■□□□□ 0.14
HSPA9-201ENST00000297185 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
HSPA9-201ENST00000297185 NESP48681 1621 aa15.91■□□□□ 0.14
HSPA9-201ENST00000297185 VPS8Q8N3P4 1428 aa15.9■□□□□ 0.14
HSPA9-201ENST00000297185 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.84■□□□□ 0.13
HSPA9-201ENST00000297185 IGF1RP08069 1367 aa15.84■□□□□ 0.13
HSPA9-201ENST00000297185 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
HSPA9-201ENST00000297185 CCER1Q8TC90 406 aaPredicted RBP15.83■□□□□ 0.12
HSPA9-201ENST00000297185 DNMBPQ6XZF7 1577 aa15.82■□□□□ 0.12
HSPA9-201ENST00000297185 TOPBP1Q92547 1522 aa15.8■□□□□ 0.12
HSPA9-201ENST00000297185 CARMIL1Q5VZK9 1371 aa15.8■□□□□ 0.12
HSPA9-201ENST00000297185 LAMC3Q9Y6N6 1575 aa15.8■□□□□ 0.12
HSPA9-201ENST00000297185 RAD54L2Q9Y4B4 1467 aa15.78■□□□□ 0.12
HSPA9-201ENST00000297185 POLA1P09884 1462 aaPredicted RBP15.76■□□□□ 0.11
HSPA9-201ENST00000297185 ARAP1Q96P48 1450 aa15.76■□□□□ 0.11
HSPA9-201ENST00000297185 PDS5BQ9NTI5 1447 aa15.75■□□□□ 0.11
HSPA9-201ENST00000297185 ABCA10Q8WWZ4 1543 aa15.72■□□□□ 0.11
HSPA9-201ENST00000297185 HNRNPUL2Q1KMD3 747 aaKnown RBP15.72■□□□□ 0.11
HSPA9-201ENST00000297185 URB2Q14146 1524 aaKnown RBP15.71■□□□□ 0.11
HSPA9-201ENST00000297185 ARHGAP35Q9NRY4 1499 aa15.7■□□□□ 0.1
HSPA9-201ENST00000297185 KANK4Q5T7N3 995 aaPredicted RBP15.65■□□□□ 0.1
HSPA9-201ENST00000297185 TDRD9Q8NDG6 1382 aaKnown RBP15.64■□□□□ 0.09
HSPA9-201ENST00000297185 KIF21AQ7Z4S6 1674 aa15.62■□□□□ 0.09
HSPA9-201ENST00000297185 P3H3Q8IVL6 736 aa15.61■□□□□ 0.09
HSPA9-201ENST00000297185 CUL7Q14999 1698 aa15.58■□□□□ 0.08
HSPA9-201ENST00000297185 GAPVD1Q14C86 1478 aa15.57■□□□□ 0.08
HSPA9-201ENST00000297185 ATP1B4Q9UN42 357 aaPredicted RBP15.56■□□□□ 0.08
HSPA9-201ENST00000297185 WDR97A6NE52 1622 aa15.55■□□□□ 0.08
HSPA9-201ENST00000297185 ABCA5Q8WWZ7 1642 aa15.52■□□□□ 0.08
HSPA9-201ENST00000297185 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
HSPA9-201ENST00000297185 MRC2Q9UBG0 1479 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms