RNA–Protein interactions for RNA: ENST00000538450.5

CACNA2D4-209, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2 BASIC

Gene CACNA2D4, Length 1,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-209ENST00000538450 NISCHQ9Y2I1 1504 aa30.5■■■□□ 2.47
CACNA2D4-209ENST00000538450 ABCC9O60706 1549 aa27.35■■□□□ 1.97
CACNA2D4-209ENST00000538450 CCDC180Q9P1Z9 1646 aa27.31■■□□□ 1.96
CACNA2D4-209ENST00000538450 RB1CC1Q8TDY2 1594 aa26.09■■□□□ 1.77
CACNA2D4-209ENST00000538450 NACADO15069 1562 aa25.93■■□□□ 1.74
CACNA2D4-209ENST00000538450 DCAF8L2P0C7V8 631 aa25.84■■□□□ 1.73
CACNA2D4-209ENST00000538450 DNAJC5BQ9UF47 199 aa25.64■■□□□ 1.69
CACNA2D4-209ENST00000538450 MYO15BQ96JP2 1530 aa25.62■■□□□ 1.69
CACNA2D4-209ENST00000538450 PABPN1Q86U42 306 aaKnown RBP eCLIP25.51■■□□□ 1.67
CACNA2D4-209ENST00000538450 ZCCHC6Q5VYS8 1495 aaKnown RBP25.26■■□□□ 1.63
CACNA2D4-209ENST00000538450 DCAF1Q9Y4B6 1507 aa25.25■■□□□ 1.63
CACNA2D4-209ENST00000538450 BICRAQ9NZM4 1560 aa25.19■■□□□ 1.62
CACNA2D4-209ENST00000538450 UNC13AQ9UPW8 1703 aa25.19■■□□□ 1.62
CACNA2D4-209ENST00000538450 SHROOM4Q9ULL8 1493 aa25.1■■□□□ 1.61
CACNA2D4-209ENST00000538450 SCRIBQ14160 1630 aa24.85■■□□□ 1.57
CACNA2D4-209ENST00000538450 CECR2Q9BXF3 1484 aa24.7■■□□□ 1.54
CACNA2D4-209ENST00000538450 CC2D2AQ9P2K1 1620 aa24.67■■□□□ 1.54
CACNA2D4-209ENST00000538450 EIF4G1Q04637 1599 aaKnown RBP24.65■■□□□ 1.54
CACNA2D4-209ENST00000538450 NCAPD3P42695 1498 aa23.96■■□□□ 1.43
CACNA2D4-209ENST00000538450 ATAD2BQ9ULI0 1458 aa23.84■■□□□ 1.41
CACNA2D4-209ENST00000538450 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
CACNA2D4-209ENST00000538450 HMGXB3Q12766 1538 aa23.73■■□□□ 1.39
CACNA2D4-209ENST00000538450 SMARCA4P51532 1647 aa23.73■■□□□ 1.39
CACNA2D4-209ENST00000538450 ERCC6Q03468 1493 aa23.72■■□□□ 1.39
CACNA2D4-209ENST00000538450 BAZ1AQ9NRL2 1556 aaPredicted RBP23.71■■□□□ 1.39
CACNA2D4-209ENST00000538450 CUX2O14529 1486 aa23.69■■□□□ 1.38
CACNA2D4-209ENST00000538450 DNAJC5Q9H3Z4 198 aa23.69■■□□□ 1.38
CACNA2D4-209ENST00000538450 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
CACNA2D4-209ENST00000538450 PEG3Q9GZU2 1588 aa23.55■■□□□ 1.36
CACNA2D4-209ENST00000538450 MROH2BQ7Z745 1585 aa23.44■■□□□ 1.34
CACNA2D4-209ENST00000538450 NESP48681 1621 aa23.44■■□□□ 1.34
CACNA2D4-209ENST00000538450 LAMC3Q9Y6N6 1575 aa23.38■■□□□ 1.33
CACNA2D4-209ENST00000538450 PDS5BQ9NTI5 1447 aa23.36■■□□□ 1.33
CACNA2D4-209ENST00000538450 CADPSQ9ULU8 1353 aa23.25■■□□□ 1.31
CACNA2D4-209ENST00000538450 THOC2Q8NI27 1593 aaKnown RBP23.19■■□□□ 1.3
CACNA2D4-209ENST00000538450 WIZO95785 1651 aa23.09■■□□□ 1.29
CACNA2D4-209ENST00000538450 MRC2Q9UBG0 1479 aa23.07■■□□□ 1.28
CACNA2D4-209ENST00000538450 KIF21AQ7Z4S6 1674 aa23.04■■□□□ 1.28
CACNA2D4-209ENST00000538450 RSF1Q96T23 1441 aaPredicted RBP23.02■■□□□ 1.28
CACNA2D4-209ENST00000538450 CEP164Q9UPV0 1460 aa22.98■■□□□ 1.27
CACNA2D4-209ENST00000538450 WDR62O43379 1518 aa22.96■■□□□ 1.27
CACNA2D4-209ENST00000538450 CFTRP13569 1480 aa22.95■■□□□ 1.26
CACNA2D4-209ENST00000538450 FANCD2Q9BXW9 1451 aa22.94■■□□□ 1.26
CACNA2D4-209ENST00000538450 TOP2AP11388 1531 aaKnown RBP22.92■■□□□ 1.26
CACNA2D4-209ENST00000538450 URB2Q14146 1524 aaKnown RBP22.68■■□□□ 1.22
CACNA2D4-209ENST00000538450 OSCARQ8IYS5 282 aa22.67■■□□□ 1.22
CACNA2D4-209ENST00000538450 CCDC88BA6NC98 1476 aa22.66■■□□□ 1.22
CACNA2D4-209ENST00000538450 TRIM41Q8WV44 630 aa22.62■■□□□ 1.21
CACNA2D4-209ENST00000538450 IFT140Q96RY7 1462 aa22.55■■□□□ 1.2
CACNA2D4-209ENST00000538450 ABCC8Q09428 1581 aa22.55■■□□□ 1.2
CACNA2D4-209ENST00000538450 PRDM2Q13029 1718 aa22.48■■□□□ 1.19
CACNA2D4-209ENST00000538450 TOPBP1Q92547 1522 aa22.47■■□□□ 1.19
CACNA2D4-209ENST00000538450 ZNF608Q9ULD9 1512 aaPredicted RBP22.39■■□□□ 1.17
CACNA2D4-209ENST00000538450 DNMBPQ6XZF7 1577 aa22.38■■□□□ 1.17
CACNA2D4-209ENST00000538450 EIF4G3O43432 1585 aaKnown RBP22.25■■□□□ 1.15
CACNA2D4-209ENST00000538450 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
CACNA2D4-209ENST00000538450 AQRO60306 1485 aaKnown RBP eCLIP22.24■■□□□ 1.151e-6■■■■□ 23.9
CACNA2D4-209ENST00000538450 SOGA1O94964 1423 aa22.21■■□□□ 1.15
CACNA2D4-209ENST00000538450 TARBP1Q13395 1621 aaKnown RBP22.19■■□□□ 1.14
CACNA2D4-209ENST00000538450 FBLN2P98095 1184 aa22.19■■□□□ 1.14
CACNA2D4-209ENST00000538450 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
CACNA2D4-209ENST00000538450 RIMBP3CA6NJZ7 1639 aa22.15■■□□□ 1.14
CACNA2D4-209ENST00000538450 RIMBP3BA6NNM3 1639 aa22.15■■□□□ 1.14
CACNA2D4-209ENST00000538450 RIMBP3Q9UFD9 1639 aa22.15■■□□□ 1.14
CACNA2D4-209ENST00000538450 TDRD9Q8NDG6 1382 aaKnown RBP22.13■■□□□ 1.13
CACNA2D4-209ENST00000538450 RAD54L2Q9Y4B4 1467 aa22.12■■□□□ 1.13
CACNA2D4-209ENST00000538450 WDR97A6NE52 1622 aa22.1■■□□□ 1.13
CACNA2D4-209ENST00000538450 SUPT5HO00267 1087 aaKnown RBP22.1■■□□□ 1.13
CACNA2D4-209ENST00000538450 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
CACNA2D4-209ENST00000538450 CYB5RLQ6IPT4 315 aa22.08■■□□□ 1.12
CACNA2D4-209ENST00000538450 CHMP7Q8WUX9 453 aaPredicted RBP22.07■■□□□ 1.12
CACNA2D4-209ENST00000538450 CUX1P39880 1505 aa22.03■■□□□ 1.12
CACNA2D4-209ENST00000538450 GRIN2BQ13224 1484 aa22.02■■□□□ 1.12
CACNA2D4-209ENST00000538450 MAGI1Q96QZ7 1491 aaPredicted RBP22.02■■□□□ 1.12
CACNA2D4-209ENST00000538450 SNAPC4Q5SXM2 1469 aa22.01■■□□□ 1.11
CACNA2D4-209ENST00000538450 CHD1O14646 1710 aa21.98■■□□□ 1.11
CACNA2D4-209ENST00000538450 SYNJ2O15056 1496 aa21.94■■□□□ 1.1
CACNA2D4-209ENST00000538450 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
CACNA2D4-209ENST00000538450 ARAP1Q96P48 1450 aa21.92■■□□□ 1.1
CACNA2D4-209ENST00000538450 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
CACNA2D4-209ENST00000538450 TRHP20396 242 aaPredicted RBP21.89■■□□□ 1.09
CACNA2D4-209ENST00000538450 ABCA10Q8WWZ4 1543 aa21.88■■□□□ 1.09
CACNA2D4-209ENST00000538450 WRNQ14191 1432 aaPredicted RBP eCLIP21.87■■□□□ 1.09
CACNA2D4-209ENST00000538450 CLASP1Q7Z460 1538 aa21.86■■□□□ 1.09
CACNA2D4-209ENST00000538450 ABCA5Q8WWZ7 1642 aa21.75■■□□□ 1.07
CACNA2D4-209ENST00000538450 PBRM1Q86U86 1689 aa21.72■■□□□ 1.07
CACNA2D4-209ENST00000538450 TOP2BQ02880 1626 aa21.7■■□□□ 1.06
CACNA2D4-209ENST00000538450 GRIN2AQ12879 1464 aa21.69■■□□□ 1.06
CACNA2D4-209ENST00000538450 FHAD1B1AJZ9 1412 aa21.68■■□□□ 1.06
CACNA2D4-209ENST00000538450 BIVM-ERCC5R4GMW8 1640 aa21.64■■□□□ 1.06
CACNA2D4-209ENST00000538450 NUP160Q12769 1436 aa21.62■■□□□ 1.05
CACNA2D4-209ENST00000538450 ERICH3Q5RHP9 1530 aa21.62■■□□□ 1.05
CACNA2D4-209ENST00000538450 ADAMTS12P58397 1594 aa21.61■■□□□ 1.05
CACNA2D4-209ENST00000538450 CEP170Q5SW79 1584 aa21.52■■□□□ 1.04
CACNA2D4-209ENST00000538450 JPH4Q96JJ6 628 aa21.48■■□□□ 1.03
CACNA2D4-209ENST00000538450 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
CACNA2D4-209ENST00000538450 SHROOM2Q13796 1616 aa21.44■■□□□ 1.02
CACNA2D4-209ENST00000538450 ERCC6L2Q5T890 1561 aa21.43■■□□□ 1.02
CACNA2D4-209ENST00000538450 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
CACNA2D4-209ENST00000538450 NPM1P06748 294 aaKnown RBP eCLIP21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms