RNA–Protein interactions for RNA: ENST00000543823.1

SYTL1-208, Transcript of synaptotagmin like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYTL1, Length 2,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYTL1-208ENST00000543823 NISCHQ9Y2I1 1504 aa40.8■■■■■ 4.12
SYTL1-208ENST00000543823 CCDC180Q9P1Z9 1646 aa35.16■■■■□ 3.22
SYTL1-208ENST00000543823 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
SYTL1-208ENST00000543823 SHROOM4Q9ULL8 1493 aa33.98■■■■□ 3.03
SYTL1-208ENST00000543823 DCAF8L2P0C7V8 631 aa33.81■■■■□ 3
SYTL1-208ENST00000543823 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
SYTL1-208ENST00000543823 ABCC9O60706 1549 aa33.23■■■□□ 2.91
SYTL1-208ENST00000543823 MYO15BQ96JP2 1530 aa32.9■■■□□ 2.86
SYTL1-208ENST00000543823 SUPT5HO00267 1087 aaKnown RBP32.87■■■□□ 2.85
SYTL1-208ENST00000543823 SCRIBQ14160 1630 aa32.73■■■□□ 2.83
SYTL1-208ENST00000543823 NACADO15069 1562 aa32.67■■■□□ 2.82
SYTL1-208ENST00000543823 RB1CC1Q8TDY2 1594 aa32.31■■■□□ 2.76
SYTL1-208ENST00000543823 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
SYTL1-208ENST00000543823 UNC13AQ9UPW8 1703 aa31.91■■■□□ 2.7
SYTL1-208ENST00000543823 CECR2Q9BXF3 1484 aa31.88■■■□□ 2.69
SYTL1-208ENST00000543823 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
SYTL1-208ENST00000543823 CHIC1Q5VXU3 224 aa31.65■■■□□ 2.66
SYTL1-208ENST00000543823 BICRAQ9NZM4 1560 aa31.56■■■□□ 2.64
SYTL1-208ENST00000543823 PABPN1Q86U42 306 aaKnown RBP eCLIP31.54■■■□□ 2.643e-6■■□□□ 12.4
SYTL1-208ENST00000543823 WIZO95785 1651 aa31.46■■■□□ 2.63
SYTL1-208ENST00000543823 BAZ1AQ9NRL2 1556 aaPredicted RBP31.38■■■□□ 2.61
SYTL1-208ENST00000543823 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
SYTL1-208ENST00000543823 TOP2AP11388 1531 aaKnown RBP30.96■■■□□ 2.55
SYTL1-208ENST00000543823 CCDC88BA6NC98 1476 aa30.78■■■□□ 2.52
SYTL1-208ENST00000543823 SMARCA2P51531 1590 aa30.78■■■□□ 2.52
SYTL1-208ENST00000543823 PEG3Q9GZU2 1588 aa30.76■■■□□ 2.52
SYTL1-208ENST00000543823 EIF4G1Q04637 1599 aaKnown RBP30.74■■■□□ 2.51
SYTL1-208ENST00000543823 LOC105371045A0A1W2PR82 267 aa30.7■■■□□ 2.5
SYTL1-208ENST00000543823 ATAD2BQ9ULI0 1458 aa30.68■■■□□ 2.5
SYTL1-208ENST00000543823 TRIM41Q8WV44 630 aa30.65■■■□□ 2.5
SYTL1-208ENST00000543823 BAZ1BQ9UIG0 1483 aaKnown RBP30.49■■■□□ 2.47
SYTL1-208ENST00000543823 FAM9AQ8IZU1 332 aaPredicted RBP30.41■■■□□ 2.46
SYTL1-208ENST00000543823 ABCC8Q09428 1581 aa30.41■■■□□ 2.46
SYTL1-208ENST00000543823 NCAPD3P42695 1498 aa30.24■■■□□ 2.43
SYTL1-208ENST00000543823 EHMT2Q96KQ7 1210 aa30.2■■■□□ 2.42
SYTL1-208ENST00000543823 HMGXB3Q12766 1538 aa30.18■■■□□ 2.42
SYTL1-208ENST00000543823 CC2D2AQ9P2K1 1620 aa29.98■■■□□ 2.39
SYTL1-208ENST00000543823 PCGF6Q9BYE7 350 aa29.98■■■□□ 2.39
SYTL1-208ENST00000543823 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
SYTL1-208ENST00000543823 SYNJ1O43426 1573 aa29.93■■■□□ 2.38
SYTL1-208ENST00000543823 SOGA1O94964 1423 aa29.92■■■□□ 2.38
SYTL1-208ENST00000543823 RUSC2Q8N2Y8 1516 aa29.86■■■□□ 2.37
SYTL1-208ENST00000543823 CFTRP13569 1480 aa29.74■■■□□ 2.35
SYTL1-208ENST00000543823 TOP2BQ02880 1626 aa29.62■■■□□ 2.33
SYTL1-208ENST00000543823 CSRNP3Q8WYN3 585 aa29.58■■■□□ 2.33
SYTL1-208ENST00000543823 CUX1P39880 1505 aa29.56■■■□□ 2.32
SYTL1-208ENST00000543823 EEA1Q15075 1411 aa29.56■■■□□ 2.32
SYTL1-208ENST00000543823 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
SYTL1-208ENST00000543823 CADPSQ9ULU8 1353 aa29.55■■■□□ 2.32
SYTL1-208ENST00000543823 TRIM26Q12899 539 aaPredicted RBP29.52■■■□□ 2.32
SYTL1-208ENST00000543823 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
SYTL1-208ENST00000543823 HRCP23327 699 aa29.5■■■□□ 2.31
SYTL1-208ENST00000543823 PRDM2Q13029 1718 aa29.49■■■□□ 2.31
SYTL1-208ENST00000543823 NESP48681 1621 aa29.38■■■□□ 2.29
SYTL1-208ENST00000543823 PPARGC1BQ86YN6 1023 aaKnown RBP29.38■■■□□ 2.29
SYTL1-208ENST00000543823 TNIKQ9UKE5 1360 aa29.33■■■□□ 2.29
SYTL1-208ENST00000543823 GOLGA3Q08378 1498 aa29.33■■■□□ 2.29
SYTL1-208ENST00000543823 CEP162Q5TB80 1403 aa29.32■■■□□ 2.28
SYTL1-208ENST00000543823 UBTFP17480 764 aaKnown RBP29.3■■■□□ 2.28
SYTL1-208ENST00000543823 KIF21BO75037 1637 aa29.28■■■□□ 2.28
SYTL1-208ENST00000543823 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.28
SYTL1-208ENST00000543823 CEP164Q9UPV0 1460 aa29.26■■■□□ 2.27
SYTL1-208ENST00000543823 RAPGEF2Q9Y4G8 1499 aa29.24■■■□□ 2.27
SYTL1-208ENST00000543823 FGD5Q6ZNL6 1462 aa29.14■■■□□ 2.25
SYTL1-208ENST00000543823 KIF27Q86VH2 1401 aa29.09■■■□□ 2.25
SYTL1-208ENST00000543823 PRXQ9BXM0 1461 aa29.09■■■□□ 2.25
SYTL1-208ENST00000543823 LAMC3Q9Y6N6 1575 aa29.08■■■□□ 2.25
SYTL1-208ENST00000543823 TTBK1Q5TCY1 1321 aaPredicted RBP29.05■■■□□ 2.24
SYTL1-208ENST00000543823 CUX2O14529 1486 aa29.03■■■□□ 2.24
SYTL1-208ENST00000543823 TOPBP1Q92547 1522 aa29■■■□□ 2.23
SYTL1-208ENST00000543823 DNMBPQ6XZF7 1577 aa29■■■□□ 2.23
SYTL1-208ENST00000543823 ERICH3Q5RHP9 1530 aa28.96■■■□□ 2.23
SYTL1-208ENST00000543823 RAD54L2Q9Y4B4 1467 aa28.96■■■□□ 2.23
SYTL1-208ENST00000543823 RANGAP1P46060 587 aaPredicted RBP28.95■■■□□ 2.22
SYTL1-208ENST00000543823 CLIP1P30622 1438 aa28.95■■■□□ 2.22
SYTL1-208ENST00000543823 URB2Q14146 1524 aaKnown RBP28.95■■■□□ 2.22
SYTL1-208ENST00000543823 POLA1P09884 1462 aaPredicted RBP28.93■■■□□ 2.22
SYTL1-208ENST00000543823 IGF1RP08069 1367 aa28.92■■■□□ 2.22
SYTL1-208ENST00000543823 KIF21AQ7Z4S6 1674 aa28.9■■■□□ 2.22
SYTL1-208ENST00000543823 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
SYTL1-208ENST00000543823 ABCA10Q8WWZ4 1543 aa28.79■■■□□ 2.2
SYTL1-208ENST00000543823 CARMIL1Q5VZK9 1371 aa28.73■■■□□ 2.19
SYTL1-208ENST00000543823 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
SYTL1-208ENST00000543823 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
SYTL1-208ENST00000543823 ARAP1Q96P48 1450 aa28.68■■■□□ 2.18
SYTL1-208ENST00000543823 TDRD9Q8NDG6 1382 aaKnown RBP28.62■■■□□ 2.17
SYTL1-208ENST00000543823 ARHGAP35Q9NRY4 1499 aa28.58■■■□□ 2.17
SYTL1-208ENST00000543823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.55■■■□□ 2.16
SYTL1-208ENST00000543823 ABCA5Q8WWZ7 1642 aa28.55■■■□□ 2.16
SYTL1-208ENST00000543823 TARBP1Q13395 1621 aaKnown RBP28.53■■■□□ 2.16
SYTL1-208ENST00000543823 MRC2Q9UBG0 1479 aa28.52■■■□□ 2.16
SYTL1-208ENST00000543823 ZEB1P37275 1124 aaPredicted RBP28.5■■■□□ 2.15
SYTL1-208ENST00000543823 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
SYTL1-208ENST00000543823 CUL7Q14999 1698 aa28.45■■■□□ 2.15
SYTL1-208ENST00000543823 APLP2Q06481 763 aa28.42■■■□□ 2.14
SYTL1-208ENST00000543823 CCER1Q8TC90 406 aaPredicted RBP28.38■■■□□ 2.13
SYTL1-208ENST00000543823 AQRO60306 1485 aaKnown RBP eCLIP28.36■■■□□ 2.13
SYTL1-208ENST00000543823 WDR62O43379 1518 aa28.36■■■□□ 2.13
SYTL1-208ENST00000543823 KANK4Q5T7N3 995 aaPredicted RBP28.34■■■□□ 2.13
SYTL1-208ENST00000543823 P3H3Q8IVL6 736 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms