Protein–RNA interactions for Protein: P43243

MATR3, Matrin-3, humanhuman

Known RBP eCLIP

Length 847 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3P43243 CHCHD3-202ENST00000423635 1310 ntTSL 1 (best)18.12■□□□□ 0.491e-6■■■■□ 20.4
MATR3P43243 CHCHD3-206ENST00000496427 721 ntTSL 57.53□□□□□ -1.28e-7■■■■□ 20.4
MATR3P43243 SFSWAP-203ENST00000535236 5593 ntTSL 1 (best)21.43■■□□□ 1.023e-6■■■■□ 20.4
MATR3P43243 SFSWAP-207ENST00000538548 2636 ntTSL 520.7■□□□□ 0.93e-6■■■■□ 20.4
MATR3P43243 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.193e-6■■■■□ 20.4
MATR3P43243 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.133e-6■■■■□ 20.4
MATR3P43243 SFSWAP-202ENST00000535202 567 ntTSL 29.35□□□□□ -0.913e-6■■■■□ 20.4
MATR3P43243 SAMD4B-212ENST00000602243 672 ntTSL 326.89■■□□□ 1.92e-7■■■■□ 20.4
MATR3P43243 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC25.39■■□□□ 1.662e-7■■■■□ 20.4
MATR3P43243 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.142e-7■■■■□ 20.4
MATR3P43243 ATXN10-211ENST00000498009 873 ntTSL 524.51■■□□□ 1.511e-6■■■■□ 20.4
MATR3P43243 ATXN10-212ENST00000640901 1185 ntTSL 5 BASIC13□□□□□ -0.331e-6■■■■□ 20.4
MATR3P43243 AKAP1-213ENST00000574683 588 ntTSL 217.43■□□□□ 0.381e-6■■■■□ 20.4
MATR3P43243 CDC7-205ENST00000497611 729 ntTSL 315.15■□□□□ 0.021e-8■■■■□ 20.4
MATR3P43243 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.161e-8■■■■□ 20.4
MATR3P43243 CDC7-202ENST00000426137 701 ntTSL 56.38□□□□□ -1.391e-8■■■■□ 20.4
MATR3P43243 RALGAPA1-206ENST00000554259 3354 ntTSL 52.6□□□□□ -1.991e-6■■■■□ 20.4
MATR3P43243 PHF3-207ENST00000505138 612 ntTSL 34.39□□□□□ -1.712e-6■■■■□ 20.4
MATR3P43243 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.79■■■□□ 2.042e-10■■■■□ 20.4
MATR3P43243 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.42e-10■■■■□ 20.4
MATR3P43243 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.028e-7■■■■□ 20.4
MATR3P43243 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.952e-10■■■■□ 20.4
MATR3P43243 PHLDB3-208ENST00000600660 696 ntTSL 320.58■□□□□ 0.892e-10■■■■□ 20.4
MATR3P43243 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.79■□□□□ 0.762e-10■■■■□ 20.4
MATR3P43243 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.588e-7■■■■□ 20.4
MATR3P43243 PSMD6-206ENST00000476464 2052 ntTSL 218.06■□□□□ 0.488e-7■■■■□ 20.4
MATR3P43243 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.071e-7■■■■□ 20.4
MATR3P43243 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC14.09□□□□□ -0.158e-7■■■■□ 20.4
MATR3P43243 PLAGL2-201ENST00000246229 5705 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.252e-10■■■■□ 20.4
MATR3P43243 PSMD6-204ENST00000467853 4583 ntTSL 1 (best)7.02□□□□□ -1.298e-7■■■■□ 20.4
MATR3P43243 CCNYL1-206ENST00000452312 709 ntTSL 55.56□□□□□ -1.522e-10■■■■□ 20.4
MATR3P43243 PSMD6-208ENST00000480205 657 ntTSL 35.37□□□□□ -1.558e-7■■■■□ 20.4
MATR3P43243 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.25□□□□□ -1.578e-7■■■■□ 20.4
MATR3P43243 PRIM2-205ENST00000490313 410 ntTSL 36.25□□□□□ -1.411e-6■■■■□ 20.4
MATR3P43243 ATXN1-206ENST00000483591 892 ntTSL 1 (best)8.79□□□□□ -14e-7■■■■□ 20.4
MATR3P43243 GPAM-203ENST00000480130 514 ntTSL 26.73□□□□□ -1.338e-7■■■■□ 20.4
MATR3P43243 GPAM-204ENST00000498541 351 ntTSL 34.58□□□□□ -1.688e-7■■■■□ 20.4
MATR3P43243 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.89■□□□□ 0.611e-6■■■■□ 20.4
MATR3P43243 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC18.12■□□□□ 0.491e-6■■■■□ 20.4
MATR3P43243 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.31e-6■■■■□ 20.4
MATR3P43243 MBNL1-212ENST00000464596 989 ntTSL 59.53□□□□□ -0.881e-6■■■■□ 20.4
MATR3P43243 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC7.8□□□□□ -1.161e-6■■■■□ 20.4
MATR3P43243 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.221e-6■■■■□ 20.4
MATR3P43243 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.16□□□□□ -1.261e-6■■■■□ 20.4
MATR3P43243 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC7.16□□□□□ -1.261e-6■■■■□ 20.4
MATR3P43243 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.23□□□□□ -1.411e-6■■■■□ 20.4
MATR3P43243 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC5.36□□□□□ -1.551e-6■■■■□ 20.4
MATR3P43243 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.77□□□□□ -1.651e-6■■■■□ 20.4
MATR3P43243 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.21□□□□□ -1.741e-6■■■■□ 20.4
MATR3P43243 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.05□□□□□ -1.761e-6■■■■□ 20.4
MATR3P43243 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.04□□□□□ -1.761e-6■■■■□ 20.4
MATR3P43243 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.04□□□□□ -1.761e-6■■■■□ 20.4
MATR3P43243 NUMB-219ENST00000555987 557 ntTSL 422.73■■□□□ 1.231e-7■■■■□ 20.4
MATR3P43243 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.11e-7■■■■□ 20.4
MATR3P43243 NUMB-215ENST00000555307 1039 ntTSL 515.2■□□□□ 0.021e-7■■■■□ 20.4
MATR3P43243 NUMB-209ENST00000554315 1740 ntTSL 1 (best)15.09■□□□□ 0.011e-7■■■■□ 20.4
MATR3P43243 NUMB-212ENST00000554546 3607 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.41e-7■■■■□ 20.4
MATR3P43243 NUMB-202ENST00000356296 3453 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.531e-7■■■■□ 20.4
MATR3P43243 NUMB-205ENST00000544991 2757 ntTSL 5 BASIC9.26□□□□□ -0.931e-7■■■■□ 20.4
MATR3P43243 NUMB-210ENST00000554394 954 ntTSL 39.22□□□□□ -0.931e-7■■■■□ 20.4
MATR3P43243 NUMB-214ENST00000555238 3588 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.061e-7■■■■□ 20.4
MATR3P43243 NUMB-211ENST00000554521 1406 ntTSL 1 (best) BASIC8.19□□□□□ -1.11e-7■■■■□ 20.4
MATR3P43243 NUMB-231ENST00000559312 1439 ntTSL 1 (best) BASIC8.15□□□□□ -1.11e-7■■■■□ 20.4
MATR3P43243 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.71□□□□□ -1.181e-7■■■■□ 20.4
MATR3P43243 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.71□□□□□ -1.181e-7■■■■□ 20.4
MATR3P43243 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.181e-7■■■■□ 20.4
MATR3P43243 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.191e-7■■■■□ 20.4
MATR3P43243 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.211e-7■■■■□ 20.4
MATR3P43243 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.43□□□□□ -1.221e-7■■■■□ 20.4
MATR3P43243 NUMB-218ENST00000555859 906 ntTSL 26.46□□□□□ -1.381e-7■■■■□ 20.4
MATR3P43243 NUMB-220ENST00000556112 568 ntTSL 44.67□□□□□ -1.661e-7■■■■□ 20.4
MATR3P43243 NDUFA10-210ENST00000471378 582 ntTSL 310.78□□□□□ -0.682e-6■■■■□ 20.4
MATR3P43243 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.634e-6■■■■□ 20.3
MATR3P43243 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.84□□□□□ -1.474e-6■■■■□ 20.3
MATR3P43243 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.151e-44■■■■□ 20.3
MATR3P43243 GLMN-202ENST00000463560 734 ntTSL 52.57□□□□□ -21e-6■■■■□ 20.3
MATR3P43243 SEC23B-205ENST00000422877 834 ntTSL 315.13■□□□□ 0.014e-6■■■■□ 20.3
MATR3P43243 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.074e-6■■■■□ 20.3
MATR3P43243 SEC23B-204ENST00000377475 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.34e-6■■■■□ 20.3
MATR3P43243 SEC23B-202ENST00000336714 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.394e-6■■■■□ 20.3
MATR3P43243 SEC23B-203ENST00000377465 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.574e-6■■■■□ 20.3
MATR3P43243 MBNL2-206ENST00000469707 2574 ntTSL 1 (best)8.79□□□□□ -16e-7■■■■□ 20.3
MATR3P43243 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.55□□□□□ -1.26e-7■■■■□ 20.3
MATR3P43243 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.236e-7■■■■□ 20.3
MATR3P43243 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.73□□□□□ -1.336e-7■■■■□ 20.3
MATR3P43243 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.14□□□□□ -1.436e-7■■■■□ 20.3
MATR3P43243 NUBPL-208ENST00000550649 557 ntTSL 520.74■□□□□ 0.912e-6■■■■□ 20.3
MATR3P43243 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.222e-6■■■■□ 20.3
MATR3P43243 NUBPL-203ENST00000547839 2001 ntTSL 29.05□□□□□ -0.962e-6■■■■□ 20.3
MATR3P43243 TPTEP1-201ENST00000383140 971 ntTSL 1 (best)8.74□□□□□ -1.017e-7■■■■□ 20.3
MATR3P43243 ENPP3-205ENST00000427707 1536 ntTSL 1 (best)8.78□□□□□ -11e-6■■■■□ 20.3
MATR3P43243 ENPP3-206ENST00000470930 550 ntTSL 56.67□□□□□ -1.341e-6■■■■□ 20.3
MATR3P43243 SRP54-AS1-202ENST00000555015 561 ntTSL 314.09□□□□□ -0.152e-6■■■■□ 20.3
MATR3P43243 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.48□□□□□ -1.692e-6■■■■□ 20.3
MATR3P43243 LINC-PINT-207ENST00000443623 453 ntTSL 33.27□□□□□ -1.896e-7■■■■□ 20.3
MATR3P43243 BCL2L11-211ENST00000433098 1197 ntTSL 529.75■■■□□ 2.353e-6■■■■□ 20.3
MATR3P43243 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC29.32■■■□□ 2.283e-6■■■■□ 20.3
MATR3P43243 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.87■■■□□ 2.213e-6■■■■□ 20.3
MATR3P43243 CTBP2-206ENST00000460976 603 ntTSL 528.83■■■□□ 2.216e-6■■■■□ 20.3
MATR3P43243 RNF114-205ENST00000623732 569 ntTSL 526.65■■□□□ 1.861e-6■■■■□ 20.3
Retrieved 100 of 16,209 protein–RNA pairs in 82 ms