RNA–Protein interactions for RNA: ENST00000505138.1

PHF3-207, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-207ENST00000505138 AEBP2Q6ZN18 517 aaPredicted RBP18.54■□□□□ 0.56
PHF3-207ENST00000505138 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
PHF3-207ENST00000505138 SENP3Q9H4L4 574 aaPredicted RBP16.13■□□□□ 0.17
PHF3-207ENST00000505138 PHF23Q9BUL5 403 aaPredicted RBP15.74■□□□□ 0.11
PHF3-207ENST00000505138 FOXD1Q16676 465 aa14.92□□□□□ -0.02
PHF3-207ENST00000505138 POTEDQ86YR6 584 aa14.62□□□□□ -0.07
PHF3-207ENST00000505138 MSH5O43196 834 aa14.36□□□□□ -0.11
PHF3-207ENST00000505138 PIAS4Q8N2W9 510 aaPredicted RBP13.89□□□□□ -0.19
PHF3-207ENST00000505138 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
PHF3-207ENST00000505138 PPP6R1Q9UPN7 881 aa13.5□□□□□ -0.25
PHF3-207ENST00000505138 ADRA2BP18089 450 aa13.45□□□□□ -0.26
PHF3-207ENST00000505138 DMRT2Q9Y5R5 561 aa12.67□□□□□ -0.38
PHF3-207ENST00000505138 SCAF1Q9H7N4 1312 aaKnown RBP12.62□□□□□ -0.39
PHF3-207ENST00000505138 CACNB1Q02641 598 aaPredicted RBP12.49□□□□□ -0.41
PHF3-207ENST00000505138 MAPK8IP2Q13387 824 aaPredicted RBP12.44□□□□□ -0.42
PHF3-207ENST00000505138 RNF39Q9H2S5 420 aa12.1□□□□□ -0.47
PHF3-207ENST00000505138 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
PHF3-207ENST00000505138 KCNA4P22459 653 aa12.05□□□□□ -0.48
PHF3-207ENST00000505138 HOXD11P31277 338 aaPredicted RBP12.04□□□□□ -0.48
PHF3-207ENST00000505138 C1QBPQ07021 282 aaKnown RBP12.01□□□□□ -0.49
PHF3-207ENST00000505138 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
PHF3-207ENST00000505138 DNAJC5BQ9UF47 199 aa11.9□□□□□ -0.5
PHF3-207ENST00000505138 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
PHF3-207ENST00000505138 RNF216Q9NWF9 866 aaPredicted RBP11.85□□□□□ -0.51
PHF3-207ENST00000505138 CNKSR2Q8WXI2 1034 aa11.83□□□□□ -0.52
PHF3-207ENST00000505138 NCBP3Q53F19 620 aaKnown RBP11.64□□□□□ -0.55
PHF3-207ENST00000505138 SLC4A1APQ9BWU0 796 aaKnown RBP11.6□□□□□ -0.55
PHF3-207ENST00000505138 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
PHF3-207ENST00000505138 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.44□□□□□ -0.58
PHF3-207ENST00000505138 POTEHQ6S545 545 aa11.41□□□□□ -0.58
PHF3-207ENST00000505138 NPM3O75607 178 aaKnown RBP11.32□□□□□ -0.6
PHF3-207ENST00000505138 DSG3P32926 999 aa11.14□□□□□ -0.63
PHF3-207ENST00000505138 CAPN15O75808 1086 aa11.1□□□□□ -0.63
PHF3-207ENST00000505138 ZBTB22O15209 634 aa11.08□□□□□ -0.64
PHF3-207ENST00000505138 U3KPZ7 1027 aaPredicted RBP11.07□□□□□ -0.64
PHF3-207ENST00000505138 APLP2Q06481 763 aa11.03□□□□□ -0.64
PHF3-207ENST00000505138 SPINK5Q9NQ38 1064 aaPredicted RBP10.99□□□□□ -0.65
PHF3-207ENST00000505138 FOXD4L1Q9NU39 408 aa10.91□□□□□ -0.66
PHF3-207ENST00000505138 ZNF219Q9P2Y4 722 aaPredicted RBP10.9□□□□□ -0.66
PHF3-207ENST00000505138 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
PHF3-207ENST00000505138 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
PHF3-207ENST00000505138 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
PHF3-207ENST00000505138 TRHP20396 242 aaPredicted RBP10.77□□□□□ -0.69
PHF3-207ENST00000505138 SAMD1Q6SPF0 538 aaPredicted RBP10.71□□□□□ -0.69
PHF3-207ENST00000505138 ABCB7O75027 752 aa10.69□□□□□ -0.7
PHF3-207ENST00000505138 SLC4A2P04920 1241 aa10.65□□□□□ -0.7
PHF3-207ENST00000505138 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
PHF3-207ENST00000505138 CHRDL2Q6WN34 429 aa10.63□□□□□ -0.71
PHF3-207ENST00000505138 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
PHF3-207ENST00000505138 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
PHF3-207ENST00000505138 NISCHQ9Y2I1 1504 aa10.59□□□□□ -0.71
PHF3-207ENST00000505138 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
PHF3-207ENST00000505138 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
PHF3-207ENST00000505138 SP7Q8TDD2 431 aaPredicted RBP10.5□□□□□ -0.73
PHF3-207ENST00000505138 AKT1S1Q96B36 256 aa10.41□□□□□ -0.74
PHF3-207ENST00000505138 POLA2Q14181 598 aa10.4□□□□□ -0.74
PHF3-207ENST00000505138 FKBP8Q14318 412 aa10.4□□□□□ -0.74
PHF3-207ENST00000505138 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
PHF3-207ENST00000505138 PIP4P2Q8N4L2 257 aa10.22□□□□□ -0.77
PHF3-207ENST00000505138 REM2Q8IYK8 340 aaPredicted RBP10.21□□□□□ -0.77
PHF3-207ENST00000505138 HAX1O00165 279 aa10.2□□□□□ -0.78
PHF3-207ENST00000505138 FXR2P51116 673 aaKnown RBP eCLIP10.15□□□□□ -0.786e-7■□□□□ 9.8
PHF3-207ENST00000505138 ATF5Q9Y2D1 282 aaPredicted RBP10.1□□□□□ -0.79
PHF3-207ENST00000505138 PITPNM1O00562 1244 aa10.07□□□□□ -0.8
PHF3-207ENST00000505138 OSCARQ8IYS5 282 aa10.04□□□□□ -0.8
PHF3-207ENST00000505138 FBLN2P98095 1184 aa9.94□□□□□ -0.82
PHF3-207ENST00000505138 SPDYE2BA6NHP3 402 aa9.93□□□□□ -0.82
PHF3-207ENST00000505138 SPDYE6P0CI01 402 aa9.93□□□□□ -0.82
PHF3-207ENST00000505138 SPDYE2Q495Y8 402 aa9.93□□□□□ -0.82
PHF3-207ENST00000505138 FBXO3Q9UK99 471 aa9.92□□□□□ -0.82
PHF3-207ENST00000505138 EVX2Q03828 476 aa9.87□□□□□ -0.83
PHF3-207ENST00000505138 SPDYE1Q8NFV5 336 aaPredicted RBP9.86□□□□□ -0.83
PHF3-207ENST00000505138 PRKAR2AP13861 404 aaKnown RBP9.84□□□□□ -0.83
PHF3-207ENST00000505138 C19orf67A6NJJ6 358 aa9.83□□□□□ -0.84
PHF3-207ENST00000505138 LHX8Q68G74 356 aa9.83□□□□□ -0.84
PHF3-207ENST00000505138 SPDYE4A6NLX3 237 aa9.81□□□□□ -0.84
PHF3-207ENST00000505138 PLCB2Q00722 1185 aa9.79□□□□□ -0.84
PHF3-207ENST00000505138 CLCN6P51797 869 aa9.77□□□□□ -0.85
PHF3-207ENST00000505138 GABBR2O75899 941 aa9.76□□□□□ -0.85
PHF3-207ENST00000505138 PROM2Q8N271 834 aa9.76□□□□□ -0.85
PHF3-207ENST00000505138 CLEC11AQ9Y240 323 aa9.74□□□□□ -0.85
PHF3-207ENST00000505138 VASPP50552 380 aaPredicted RBP9.71□□□□□ -0.86
PHF3-207ENST00000505138 MKRN4PQ13434 485 aaPredicted RBP9.7□□□□□ -0.86
PHF3-207ENST00000505138 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
PHF3-207ENST00000505138 ZNF692Q9BU19 519 aaPredicted RBP9.66□□□□□ -0.86
PHF3-207ENST00000505138 IFNLR1Q8IU57 520 aaPredicted RBP9.65□□□□□ -0.86
PHF3-207ENST00000505138 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
PHF3-207ENST00000505138 PRR29P0C7W0 189 aa9.6□□□□□ -0.87
PHF3-207ENST00000505138 PKD2Q13563 968 aa9.58□□□□□ -0.88
PHF3-207ENST00000505138 DCAF8L2P0C7V8 631 aa9.57□□□□□ -0.88
PHF3-207ENST00000505138 VSIG10Q8N0Z9 540 aa9.57□□□□□ -0.88
PHF3-207ENST00000505138 BCANQ96GW7 911 aa9.56□□□□□ -0.88
PHF3-207ENST00000505138 CCDC180Q9P1Z9 1646 aa9.56□□□□□ -0.88
PHF3-207ENST00000505138 PLSCR2Q9NRY7 297 aa9.52□□□□□ -0.89
PHF3-207ENST00000505138 CD44P16070 742 aaKnown RBP9.51□□□□□ -0.89
PHF3-207ENST00000505138 CHADLQ6NUI6 762 aa9.51□□□□□ -0.89
PHF3-207ENST00000505138 DCBLD2Q96PD2 775 aa9.49□□□□□ -0.89
PHF3-207ENST00000505138 PABPN1Q86U42 306 aaKnown RBP eCLIP9.48□□□□□ -0.89
PHF3-207ENST00000505138 POTEIP0CG38 1075 aa9.46□□□□□ -0.9
PHF3-207ENST00000505138 BBXQ8WY36 941 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms