RNA–Protein interactions for RNA: ENST00000555859.5

NUMB-218, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 2

Gene NUMB, Length 906 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-218ENST00000555859 AEBP2Q6ZN18 517 aaPredicted RBP27.37■■□□□ 1.97
NUMB-218ENST00000555859 CHIC1Q5VXU3 224 aa26.34■■□□□ 1.81
NUMB-218ENST00000555859 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
NUMB-218ENST00000555859 SENP3Q9H4L4 574 aaPredicted RBP23.17■■□□□ 1.3
NUMB-218ENST00000555859 FOXD1Q16676 465 aa21.62■■□□□ 1.05
NUMB-218ENST00000555859 PLPPR3Q6T4P5 718 aa21.19■□□□□ 0.98
NUMB-218ENST00000555859 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
NUMB-218ENST00000555859 ADRA2BP18089 450 aa20.51■□□□□ 0.87
NUMB-218ENST00000555859 PIAS4Q8N2W9 510 aaPredicted RBP20.25■□□□□ 0.83
NUMB-218ENST00000555859 MSH5O43196 834 aa19.98■□□□□ 0.79
NUMB-218ENST00000555859 POTEDQ86YR6 584 aa18.86■□□□□ 0.61
NUMB-218ENST00000555859 MAPK8IP2Q13387 824 aaPredicted RBP18.73■□□□□ 0.59
NUMB-218ENST00000555859 PPP4R3CPQ6ZMV5 832 aa18.67■□□□□ 0.58
NUMB-218ENST00000555859 SCAF1Q9H7N4 1312 aaKnown RBP18.65■□□□□ 0.58
NUMB-218ENST00000555859 DMRT2Q9Y5R5 561 aa18.48■□□□□ 0.55
NUMB-218ENST00000555859 CNKSR2Q8WXI2 1034 aa18.19■□□□□ 0.5
NUMB-218ENST00000555859 NCBP3Q53F19 620 aaKnown RBP18■□□□□ 0.47
NUMB-218ENST00000555859 HOXD11P31277 338 aaPredicted RBP17.97■□□□□ 0.47
NUMB-218ENST00000555859 RNF216Q9NWF9 866 aaPredicted RBP17.92■□□□□ 0.46
NUMB-218ENST00000555859 KCNA4P22459 653 aa17.87■□□□□ 0.45
NUMB-218ENST00000555859 NPM3O75607 178 aaKnown RBP17.83■□□□□ 0.44
NUMB-218ENST00000555859 DCAF8L1A6NGE4 600 aa17.64■□□□□ 0.41
NUMB-218ENST00000555859 DNAJC5BQ9UF47 199 aa17.36■□□□□ 0.37
NUMB-218ENST00000555859 RNF39Q9H2S5 420 aa17.15■□□□□ 0.34
NUMB-218ENST00000555859 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.325e-7■□□□□ 8.8
NUMB-218ENST00000555859 SLC4A2P04920 1241 aa16.95■□□□□ 0.3
NUMB-218ENST00000555859 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
NUMB-218ENST00000555859 CACNB1Q02641 598 aaPredicted RBP16.9■□□□□ 0.3
NUMB-218ENST00000555859 C1QBPQ07021 282 aaKnown RBP16.88■□□□□ 0.29
NUMB-218ENST00000555859 U3KPZ7 1027 aaPredicted RBP16.82■□□□□ 0.28
NUMB-218ENST00000555859 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
NUMB-218ENST00000555859 ZBTB22O15209 634 aa16.49■□□□□ 0.23
NUMB-218ENST00000555859 SPINK5Q9NQ38 1064 aaPredicted RBP16.46■□□□□ 0.23
NUMB-218ENST00000555859 MYCNP04198 464 aaPredicted RBP16.43■□□□□ 0.22
NUMB-218ENST00000555859 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.38■□□□□ 0.21
NUMB-218ENST00000555859 HNRNPUL2Q1KMD3 747 aaKnown RBP16.38■□□□□ 0.21
NUMB-218ENST00000555859 CAPN15O75808 1086 aa16.34■□□□□ 0.21
NUMB-218ENST00000555859 SAMD1Q6SPF0 538 aaPredicted RBP16.33■□□□□ 0.2
NUMB-218ENST00000555859 APLP2Q06481 763 aa16.26■□□□□ 0.19
NUMB-218ENST00000555859 DSG3P32926 999 aa16.21■□□□□ 0.19
NUMB-218ENST00000555859 TRHP20396 242 aaPredicted RBP16.19■□□□□ 0.18
NUMB-218ENST00000555859 ZNF219Q9P2Y4 722 aaPredicted RBP16.15■□□□□ 0.18
NUMB-218ENST00000555859 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
NUMB-218ENST00000555859 CSRNP3Q8WYN3 585 aa16.08■□□□□ 0.16
NUMB-218ENST00000555859 EHMT2Q96KQ7 1210 aa16.05■□□□□ 0.16
NUMB-218ENST00000555859 ABCB7O75027 752 aa16.04■□□□□ 0.16
NUMB-218ENST00000555859 ATXN8OSP0DMR3 200 aa15.95■□□□□ 0.14
NUMB-218ENST00000555859 POLA2Q14181 598 aa15.87■□□□□ 0.13
NUMB-218ENST00000555859 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
NUMB-218ENST00000555859 MKRN4PQ13434 485 aaPredicted RBP15.39■□□□□ 0.05
NUMB-218ENST00000555859 OSCARQ8IYS5 282 aa15.36■□□□□ 0.05
NUMB-218ENST00000555859 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
NUMB-218ENST00000555859 FBLN2P98095 1184 aa15.32■□□□□ 0.04
NUMB-218ENST00000555859 AKT1S1Q96B36 256 aa15.14■□□□□ 0.01
NUMB-218ENST00000555859 SPDYE2BA6NHP3 402 aa15.12■□□□□ 0.01
NUMB-218ENST00000555859 SPDYE6P0CI01 402 aa15.12■□□□□ 0.01
NUMB-218ENST00000555859 SPDYE2Q495Y8 402 aa15.12■□□□□ 0.01
NUMB-218ENST00000555859 REM2Q8IYK8 340 aaPredicted RBP15.03■□□□□ -0
NUMB-218ENST00000555859 ZNF692Q9BU19 519 aaPredicted RBP15□□□□□ -0.01
NUMB-218ENST00000555859 SSUH2Q9Y2M2 353 aa15□□□□□ -0.01
NUMB-218ENST00000555859 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
NUMB-218ENST00000555859 PITPNM1O00562 1244 aa14.86□□□□□ -0.03
NUMB-218ENST00000555859 POTEHQ6S545 545 aa14.84□□□□□ -0.03
NUMB-218ENST00000555859 PABPN1Q86U42 306 aaKnown RBP eCLIP14.81□□□□□ -0.04
NUMB-218ENST00000555859 SPDYE4A6NLX3 237 aa14.8□□□□□ -0.04
NUMB-218ENST00000555859 SPDYE1Q8NFV5 336 aaPredicted RBP14.73□□□□□ -0.05
NUMB-218ENST00000555859 CLEC11AQ9Y240 323 aa14.69□□□□□ -0.06
NUMB-218ENST00000555859 PIP4P2Q8N4L2 257 aa14.67□□□□□ -0.06
NUMB-218ENST00000555859 FXR2P51116 673 aaKnown RBP eCLIP14.66□□□□□ -0.06
NUMB-218ENST00000555859 PROM2Q8N271 834 aa14.57□□□□□ -0.08
NUMB-218ENST00000555859 FKBP8Q14318 412 aa14.51□□□□□ -0.09
NUMB-218ENST00000555859 PRR29P0C7W0 189 aa14.5□□□□□ -0.09
NUMB-218ENST00000555859 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
NUMB-218ENST00000555859 STAG3Q9UJ98 1225 aa14.45□□□□□ -0.1
NUMB-218ENST00000555859 CHADLQ6NUI6 762 aa14.43□□□□□ -0.1
NUMB-218ENST00000555859 CREBZFQ9NS37 354 aa14.31□□□□□ -0.12
NUMB-218ENST00000555859 HAX1O00165 279 aa14.25□□□□□ -0.13
NUMB-218ENST00000555859 FARP1Q9Y4F1 1045 aaPredicted RBP14.23□□□□□ -0.13
NUMB-218ENST00000555859 NISCHQ9Y2I1 1504 aa14.23□□□□□ -0.13
NUMB-218ENST00000555859 EVX2Q03828 476 aa14.21□□□□□ -0.13
NUMB-218ENST00000555859 C19orf67A6NJJ6 358 aa14.17□□□□□ -0.14
NUMB-218ENST00000555859 MNX1P50219 401 aaPredicted RBP14.15□□□□□ -0.14
NUMB-218ENST00000555859 SP7Q8TDD2 431 aaPredicted RBP14.1□□□□□ -0.15
NUMB-218ENST00000555859 MIER1Q8N108 512 aa14.06□□□□□ -0.16
NUMB-218ENST00000555859 CD44P16070 742 aaKnown RBP14.03□□□□□ -0.16
NUMB-218ENST00000555859 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
NUMB-218ENST00000555859 NPM1P06748 294 aaKnown RBP eCLIP13.98□□□□□ -0.17
NUMB-218ENST00000555859 PLCD3Q8N3E9 789 aa13.98□□□□□ -0.17
NUMB-218ENST00000555859 PLEKHG5O94827 1062 aa13.92□□□□□ -0.18
NUMB-218ENST00000555859 VASPP50552 380 aaPredicted RBP13.9□□□□□ -0.18
NUMB-218ENST00000555859 ZRANB1Q9UGI0 708 aa13.89□□□□□ -0.19
NUMB-218ENST00000555859 GABBR2O75899 941 aa13.85□□□□□ -0.19
NUMB-218ENST00000555859 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
NUMB-218ENST00000555859 RASEFQ8IZ41 740 aa13.81□□□□□ -0.2
NUMB-218ENST00000555859 PAK3O75914 559 aaPredicted RBP13.8□□□□□ -0.2
NUMB-218ENST00000555859 NUBP1P53384 320 aa13.8□□□□□ -0.2
NUMB-218ENST00000555859 ZBTB47Q9UFB7 747 aaPredicted RBP13.8□□□□□ -0.2
NUMB-218ENST00000555859 TSPYL2Q9H2G4 693 aaPredicted RBP13.79□□□□□ -0.2
NUMB-218ENST00000555859 PHF12Q96QT6 1004 aa13.77□□□□□ -0.21
NUMB-218ENST00000555859 IFNLR1Q8IU57 520 aaPredicted RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms