RNA–Protein interactions for RNA: ENST00000467853.5

PSMD6-204, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best)

Gene PSMD6, Length 4,583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-204ENST00000467853 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
PSMD6-204ENST00000467853 AEBP2Q6ZN18 517 aaPredicted RBP11.65□□□□□ -0.54
PSMD6-204ENST00000467853 CHIC1Q5VXU3 224 aa11.62□□□□□ -0.55
PSMD6-204ENST00000467853 SHROOM4Q9ULL8 1493 aa10.71□□□□□ -0.69
PSMD6-204ENST00000467853 CCDC180Q9P1Z9 1646 aa10.69□□□□□ -0.7
PSMD6-204ENST00000467853 ZCCHC6Q5VYS8 1495 aaKnown RBP10.66□□□□□ -0.7
PSMD6-204ENST00000467853 SUPT5HO00267 1087 aaKnown RBP10.64□□□□□ -0.71
PSMD6-204ENST00000467853 HRCP23327 699 aa10.45□□□□□ -0.74
PSMD6-204ENST00000467853 DCAF1Q9Y4B6 1507 aa10.4□□□□□ -0.74
PSMD6-204ENST00000467853 MYO15BQ96JP2 1530 aa10.33□□□□□ -0.76
PSMD6-204ENST00000467853 DCAF8L2P0C7V8 631 aa10.33□□□□□ -0.76
PSMD6-204ENST00000467853 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
PSMD6-204ENST00000467853 PHF23Q9BUL5 403 aaPredicted RBP10.26□□□□□ -0.77
PSMD6-204ENST00000467853 SENP3Q9H4L4 574 aaPredicted RBP10.16□□□□□ -0.78
PSMD6-204ENST00000467853 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
PSMD6-204ENST00000467853 ZEB1P37275 1124 aaPredicted RBP10.14□□□□□ -0.79
PSMD6-204ENST00000467853 ABCC9O60706 1549 aa10.1□□□□□ -0.79
PSMD6-204ENST00000467853 LOC105371045A0A1W2PR82 267 aa10.06□□□□□ -0.8
PSMD6-204ENST00000467853 PPARGC1BQ86YN6 1023 aaKnown RBP10.04□□□□□ -0.8
PSMD6-204ENST00000467853 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
PSMD6-204ENST00000467853 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
PSMD6-204ENST00000467853 PELP1Q8IZL8 1130 aaKnown RBP9.97□□□□□ -0.81
PSMD6-204ENST00000467853 RB1CC1Q8TDY2 1594 aa9.96□□□□□ -0.81
PSMD6-204ENST00000467853 SCRIBQ14160 1630 aa9.93□□□□□ -0.82
PSMD6-204ENST00000467853 PLPPR3Q6T4P5 718 aa9.89□□□□□ -0.83
PSMD6-204ENST00000467853 NACADO15069 1562 aa9.85□□□□□ -0.83
PSMD6-204ENST00000467853 FAM9AQ8IZU1 332 aaPredicted RBP9.8□□□□□ -0.84
PSMD6-204ENST00000467853 MROH2BQ7Z745 1585 aa9.72□□□□□ -0.85
PSMD6-204ENST00000467853 BAZ1AQ9NRL2 1556 aaPredicted RBP9.71□□□□□ -0.85
PSMD6-204ENST00000467853 CECR2Q9BXF3 1484 aa9.7□□□□□ -0.86
PSMD6-204ENST00000467853 CCER1Q8TC90 406 aaPredicted RBP9.69□□□□□ -0.86
PSMD6-204ENST00000467853 WIZO95785 1651 aa9.67□□□□□ -0.86
PSMD6-204ENST00000467853 CENPBP07199 599 aaPredicted RBP9.66□□□□□ -0.86
PSMD6-204ENST00000467853 SCAF1Q9H7N4 1312 aaKnown RBP9.64□□□□□ -0.87
PSMD6-204ENST00000467853 WRNQ14191 1432 aaPredicted RBP eCLIP9.64□□□□□ -0.87
PSMD6-204ENST00000467853 EEA1Q15075 1411 aa9.64□□□□□ -0.87
PSMD6-204ENST00000467853 EHMT2Q96KQ7 1210 aa9.64□□□□□ -0.87
PSMD6-204ENST00000467853 TOP2AP11388 1531 aaKnown RBP9.62□□□□□ -0.87
PSMD6-204ENST00000467853 EIF4G1Q04637 1599 aaKnown RBP9.62□□□□□ -0.87
PSMD6-204ENST00000467853 MYT1Q01538 1121 aa9.61□□□□□ -0.87
PSMD6-204ENST00000467853 ACIN1Q9UKV3 1341 aaKnown RBP9.61□□□□□ -0.87
PSMD6-204ENST00000467853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.59□□□□□ -0.87
PSMD6-204ENST00000467853 TNIKQ9UKE5 1360 aa9.58□□□□□ -0.88
PSMD6-204ENST00000467853 DIEXFQ68CQ4 756 aaKnown RBP9.58□□□□□ -0.88
PSMD6-204ENST00000467853 ADRA2BP18089 450 aa9.57□□□□□ -0.88
PSMD6-204ENST00000467853 CEP162Q5TB80 1403 aa9.56□□□□□ -0.88
PSMD6-204ENST00000467853 SMARCA4P51532 1647 aa9.54□□□□□ -0.88
PSMD6-204ENST00000467853 CCDC88BA6NC98 1476 aa9.52□□□□□ -0.89
PSMD6-204ENST00000467853 CSRNP3Q8WYN3 585 aa9.52□□□□□ -0.89
PSMD6-204ENST00000467853 SMARCA2P51531 1590 aa9.52□□□□□ -0.89
PSMD6-204ENST00000467853 GOLGA3Q08378 1498 aa9.51□□□□□ -0.89
PSMD6-204ENST00000467853 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
PSMD6-204ENST00000467853 ZNF316A6NFI3 1004 aaPredicted RBP9.49□□□□□ -0.89
PSMD6-204ENST00000467853 ABCC8Q09428 1581 aa9.49□□□□□ -0.89
PSMD6-204ENST00000467853 NEUROD1Q13562 356 aa9.49□□□□□ -0.89
PSMD6-204ENST00000467853 GTF3C3Q9Y5Q9 886 aa9.46□□□□□ -0.9
PSMD6-204ENST00000467853 CEP164Q9UPV0 1460 aa9.44□□□□□ -0.9
PSMD6-204ENST00000467853 SOGA1O94964 1423 aa9.44□□□□□ -0.9
PSMD6-204ENST00000467853 PIAS4Q8N2W9 510 aaPredicted RBP9.44□□□□□ -0.9
PSMD6-204ENST00000467853 APLP2Q06481 763 aa9.44□□□□□ -0.9
PSMD6-204ENST00000467853 KIF21BO75037 1637 aa9.41□□□□□ -0.9
PSMD6-204ENST00000467853 TTBK1Q5TCY1 1321 aaPredicted RBP9.4□□□□□ -0.9
PSMD6-204ENST00000467853 BAZ1BQ9UIG0 1483 aaKnown RBP9.4□□□□□ -0.91
PSMD6-204ENST00000467853 PEG3Q9GZU2 1588 aa9.38□□□□□ -0.91
PSMD6-204ENST00000467853 CLIP1P30622 1438 aa9.37□□□□□ -0.91
PSMD6-204ENST00000467853 CLSPNQ9HAW4 1339 aa9.37□□□□□ -0.91
PSMD6-204ENST00000467853 UNC13AQ9UPW8 1703 aa9.37□□□□□ -0.91
PSMD6-204ENST00000467853 VPS8Q8N3P4 1428 aa9.36□□□□□ -0.91
PSMD6-204ENST00000467853 RUSC2Q8N2Y8 1516 aa9.34□□□□□ -0.91
PSMD6-204ENST00000467853 HNRNPUL2Q1KMD3 747 aaKnown RBP9.32□□□□□ -0.92
PSMD6-204ENST00000467853 FOXD1Q16676 465 aa9.31□□□□□ -0.92
PSMD6-204ENST00000467853 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
PSMD6-204ENST00000467853 SYNJ1O43426 1573 aa9.29□□□□□ -0.92
PSMD6-204ENST00000467853 MIER1Q8N108 512 aa9.27□□□□□ -0.93
PSMD6-204ENST00000467853 DCAF8L1A6NGE4 600 aa9.26□□□□□ -0.93
PSMD6-204ENST00000467853 ERICH3Q5RHP9 1530 aa9.25□□□□□ -0.93
PSMD6-204ENST00000467853 BICRAQ9NZM4 1560 aa9.25□□□□□ -0.93
PSMD6-204ENST00000467853 ATAD2BQ9ULI0 1458 aa9.25□□□□□ -0.93
PSMD6-204ENST00000467853 TOP2BQ02880 1626 aa9.23□□□□□ -0.93
PSMD6-204ENST00000467853 RAPGEF2Q9Y4G8 1499 aa9.23□□□□□ -0.93
PSMD6-204ENST00000467853 PABPN1Q86U42 306 aaKnown RBP eCLIP9.21□□□□□ -0.93
PSMD6-204ENST00000467853 BIVM-ERCC5R4GMW8 1640 aa9.2□□□□□ -0.94
PSMD6-204ENST00000467853 PPP6R1Q9UPN7 881 aa9.19□□□□□ -0.94
PSMD6-204ENST00000467853 DHX57Q6P158 1386 aaKnown RBP9.18□□□□□ -0.94
PSMD6-204ENST00000467853 PRXQ9BXM0 1461 aa9.17□□□□□ -0.94
PSMD6-204ENST00000467853 KIF27Q86VH2 1401 aa9.16□□□□□ -0.94
PSMD6-204ENST00000467853 RRBP1Q9P2E9 1410 aaKnown RBP9.16□□□□□ -0.94
PSMD6-204ENST00000467853 CUX2O14529 1486 aa9.14□□□□□ -0.95
PSMD6-204ENST00000467853 ARAP1Q96P48 1450 aa9.14□□□□□ -0.95
PSMD6-204ENST00000467853 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
PSMD6-204ENST00000467853 CCNB3Q8WWL7 1395 aa9.12□□□□□ -0.95
PSMD6-204ENST00000467853 HMGXB3Q12766 1538 aa9.11□□□□□ -0.95
PSMD6-204ENST00000467853 MAP3K1Q13233 1512 aa9.09□□□□□ -0.95
PSMD6-204ENST00000467853 SUPT16HQ9Y5B9 1047 aaKnown RBP9.08□□□□□ -0.96
PSMD6-204ENST00000467853 NCAPD3P42695 1498 aa9.08□□□□□ -0.96
PSMD6-204ENST00000467853 TIMELESSQ9UNS1 1208 aa9.07□□□□□ -0.96
PSMD6-204ENST00000467853 KANK4Q5T7N3 995 aaPredicted RBP9.07□□□□□ -0.96
PSMD6-204ENST00000467853 CUX1P39880 1505 aa9.05□□□□□ -0.96
PSMD6-204ENST00000467853 ARHGAP35Q9NRY4 1499 aa9.04□□□□□ -0.96
PSMD6-204ENST00000467853 SETD5Q9C0A6 1442 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms