RNA–Protein interactions for RNA: ENST00000600660.1

PHLDB3-208, Transcript of pleckstrin homology like domain family B member 3, humanhuman

TSL 3

Gene PHLDB3, Length 696 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB3-208ENST00000600660 NISCHQ9Y2I1 1504 aa47.86■■■■■ 5.25
PHLDB3-208ENST00000600660 ABCC9O60706 1549 aa43.24■■■■■ 4.51
PHLDB3-208ENST00000600660 CCDC180Q9P1Z9 1646 aa42.97■■■■■ 4.47
PHLDB3-208ENST00000600660 RB1CC1Q8TDY2 1594 aa40.99■■■■■ 4.15
PHLDB3-208ENST00000600660 DNAJC5BQ9UF47 199 aa40.81■■■■■ 4.12
PHLDB3-208ENST00000600660 NACADO15069 1562 aa40.66■■■■■ 4.1
PHLDB3-208ENST00000600660 DCAF8L2P0C7V8 631 aa40.5■■■■■ 4.07
PHLDB3-208ENST00000600660 PABPN1Q86U42 306 aaKnown RBP eCLIP40.27■■■■■ 4.04
PHLDB3-208ENST00000600660 UNC13AQ9UPW8 1703 aa40.16■■■■■ 4.02
PHLDB3-208ENST00000600660 MYO15BQ96JP2 1530 aa40.03■■■■■ 4
PHLDB3-208ENST00000600660 BICRAQ9NZM4 1560 aa39.91■■■■□ 3.98
PHLDB3-208ENST00000600660 ZCCHC6Q5VYS8 1495 aaKnown RBP39.62■■■■□ 3.93
PHLDB3-208ENST00000600660 DCAF1Q9Y4B6 1507 aa39.47■■■■□ 3.91
PHLDB3-208ENST00000600660 SCRIBQ14160 1630 aa39.22■■■■□ 3.87
PHLDB3-208ENST00000600660 SHROOM4Q9ULL8 1493 aa39.18■■■■□ 3.86
PHLDB3-208ENST00000600660 CC2D2AQ9P2K1 1620 aa39.03■■■■□ 3.84
PHLDB3-208ENST00000600660 CECR2Q9BXF3 1484 aa38.93■■■■□ 3.82
PHLDB3-208ENST00000600660 EIF4G1Q04637 1599 aaKnown RBP38.9■■■■□ 3.82
PHLDB3-208ENST00000600660 NCAPD3P42695 1498 aa37.58■■■■□ 3.61
PHLDB3-208ENST00000600660 DNAJC5Q9H3Z4 198 aa37.5■■■■□ 3.59
PHLDB3-208ENST00000600660 ATAD2BQ9ULI0 1458 aa37.47■■■■□ 3.59
PHLDB3-208ENST00000600660 SMARCA4P51532 1647 aa37.38■■■■□ 3.57
PHLDB3-208ENST00000600660 SMARCA2P51531 1590 aa37.29■■■■□ 3.56
PHLDB3-208ENST00000600660 ERCC6Q03468 1493 aa37.27■■■■□ 3.56
PHLDB3-208ENST00000600660 HMGXB3Q12766 1538 aa37.26■■■■□ 3.55
PHLDB3-208ENST00000600660 CUX2O14529 1486 aa37.25■■■■□ 3.55
PHLDB3-208ENST00000600660 NESP48681 1621 aa37.13■■■■□ 3.53
PHLDB3-208ENST00000600660 BAZ1AQ9NRL2 1556 aaPredicted RBP37.12■■■■□ 3.53
PHLDB3-208ENST00000600660 BAZ1BQ9UIG0 1483 aaKnown RBP37.06■■■■□ 3.52
PHLDB3-208ENST00000600660 PEG3Q9GZU2 1588 aa36.99■■■■□ 3.51
PHLDB3-208ENST00000600660 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
PHLDB3-208ENST00000600660 THOC2Q8NI27 1593 aaKnown RBP36.74■■■■□ 3.47
PHLDB3-208ENST00000600660 LAMC3Q9Y6N6 1575 aa36.73■■■■□ 3.47
PHLDB3-208ENST00000600660 KIF21AQ7Z4S6 1674 aa36.61■■■■□ 3.45
PHLDB3-208ENST00000600660 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.44
PHLDB3-208ENST00000600660 WIZO95785 1651 aa36.47■■■■□ 3.43
PHLDB3-208ENST00000600660 CADPSQ9ULU8 1353 aa36.43■■■■□ 3.42
PHLDB3-208ENST00000600660 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
PHLDB3-208ENST00000600660 WDR62O43379 1518 aa36.17■■■■□ 3.38
PHLDB3-208ENST00000600660 RSF1Q96T23 1441 aaPredicted RBP36.08■■■■□ 3.37
PHLDB3-208ENST00000600660 CEP164Q9UPV0 1460 aa36.05■■■■□ 3.36
PHLDB3-208ENST00000600660 FANCD2Q9BXW9 1451 aa36.03■■■■□ 3.36
PHLDB3-208ENST00000600660 CFTRP13569 1480 aa35.99■■■■□ 3.35
PHLDB3-208ENST00000600660 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
PHLDB3-208ENST00000600660 TRIM41Q8WV44 630 aa35.8■■■■□ 3.32
PHLDB3-208ENST00000600660 URB2Q14146 1524 aaKnown RBP35.78■■■■□ 3.32
PHLDB3-208ENST00000600660 CCDC88BA6NC98 1476 aa35.58■■■■□ 3.29
PHLDB3-208ENST00000600660 PRDM2Q13029 1718 aa35.57■■■■□ 3.29
PHLDB3-208ENST00000600660 OSCARQ8IYS5 282 aa35.55■■■■□ 3.28
PHLDB3-208ENST00000600660 ZNF608Q9ULD9 1512 aaPredicted RBP35.39■■■■□ 3.26
PHLDB3-208ENST00000600660 IFT140Q96RY7 1462 aa35.34■■■■□ 3.25
PHLDB3-208ENST00000600660 TOPBP1Q92547 1522 aa35.33■■■■□ 3.25
PHLDB3-208ENST00000600660 DNMBPQ6XZF7 1577 aa35.17■■■■□ 3.22
PHLDB3-208ENST00000600660 ABCC8Q09428 1581 aa35.15■■■■□ 3.22
PHLDB3-208ENST00000600660 RIMBP3CA6NJZ7 1639 aa35.14■■■■□ 3.22
PHLDB3-208ENST00000600660 RIMBP3BA6NNM3 1639 aa35.14■■■■□ 3.22
PHLDB3-208ENST00000600660 RIMBP3Q9UFD9 1639 aa35.14■■■■□ 3.22
PHLDB3-208ENST00000600660 EIF4G3O43432 1585 aaKnown RBP35.13■■■■□ 3.21
PHLDB3-208ENST00000600660 TARBP1Q13395 1621 aaKnown RBP35.05■■■■□ 3.2
PHLDB3-208ENST00000600660 AQRO60306 1485 aaKnown RBP eCLIP35.03■■■■□ 3.22e-9■■■■■ 50.5
PHLDB3-208ENST00000600660 ARHGEF11O15085 1522 aa35.01■■■■□ 3.19
PHLDB3-208ENST00000600660 POLA1P09884 1462 aaPredicted RBP34.97■■■■□ 3.19
PHLDB3-208ENST00000600660 CHD1O14646 1710 aa34.92■■■■□ 3.18
PHLDB3-208ENST00000600660 RAD54L2Q9Y4B4 1467 aa34.89■■■■□ 3.18
PHLDB3-208ENST00000600660 FBLN2P98095 1184 aa34.8■■■■□ 3.16
PHLDB3-208ENST00000600660 TDRD9Q8NDG6 1382 aaKnown RBP34.79■■■■□ 3.16
PHLDB3-208ENST00000600660 SOGA1O94964 1423 aa34.79■■■■□ 3.16
PHLDB3-208ENST00000600660 CYB5RLQ6IPT4 315 aa34.78■■■■□ 3.16
PHLDB3-208ENST00000600660 FGD5Q6ZNL6 1462 aa34.72■■■■□ 3.15
PHLDB3-208ENST00000600660 CUX1P39880 1505 aa34.69■■■■□ 3.14
PHLDB3-208ENST00000600660 ARAP1Q96P48 1450 aa34.67■■■■□ 3.14
PHLDB3-208ENST00000600660 SNAPC4Q5SXM2 1469 aa34.64■■■■□ 3.14
PHLDB3-208ENST00000600660 WDR97A6NE52 1622 aa34.56■■■■□ 3.12
PHLDB3-208ENST00000600660 CLASP1Q7Z460 1538 aa34.5■■■■□ 3.11
PHLDB3-208ENST00000600660 CHMP7Q8WUX9 453 aaPredicted RBP34.49■■■■□ 3.11
PHLDB3-208ENST00000600660 MAGI1Q96QZ7 1491 aaPredicted RBP34.49■■■■□ 3.11
PHLDB3-208ENST00000600660 GRIN2BQ13224 1484 aa34.48■■■■□ 3.11
PHLDB3-208ENST00000600660 TRHP20396 242 aaPredicted RBP34.41■■■■□ 3.1
PHLDB3-208ENST00000600660 SYNJ1O43426 1573 aa34.4■■■■□ 3.1
PHLDB3-208ENST00000600660 SYNJ2O15056 1496 aa34.39■■■■□ 3.1
PHLDB3-208ENST00000600660 SUPT5HO00267 1087 aaKnown RBP34.37■■■■□ 3.09
PHLDB3-208ENST00000600660 GAPVD1Q14C86 1478 aa34.36■■■■□ 3.09
PHLDB3-208ENST00000600660 PBRM1Q86U86 1689 aa34.35■■■■□ 3.09
PHLDB3-208ENST00000600660 ABCA10Q8WWZ4 1543 aa34.3■■■■□ 3.08
PHLDB3-208ENST00000600660 ABCA5Q8WWZ7 1642 aa34.27■■■■□ 3.08
PHLDB3-208ENST00000600660 WRNQ14191 1432 aaPredicted RBP eCLIP34.1■■■■□ 3.05
PHLDB3-208ENST00000600660 GRIN2AQ12879 1464 aa34.07■■■■□ 3.04
PHLDB3-208ENST00000600660 TOP2BQ02880 1626 aa34.04■■■■□ 3.04
PHLDB3-208ENST00000600660 BIVM-ERCC5R4GMW8 1640 aa34.04■■■■□ 3.04
PHLDB3-208ENST00000600660 ERCC6L2Q5T890 1561 aa34.03■■■■□ 3.04
PHLDB3-208ENST00000600660 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
PHLDB3-208ENST00000600660 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
PHLDB3-208ENST00000600660 NUP160Q12769 1436 aa33.96■■■■□ 3.03
PHLDB3-208ENST00000600660 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
PHLDB3-208ENST00000600660 ERICH3Q5RHP9 1530 aa33.84■■■■□ 3.01
PHLDB3-208ENST00000600660 SHROOM2Q13796 1616 aa33.82■■■■□ 3.01
PHLDB3-208ENST00000600660 PRG4Q92954 1404 aaPredicted RBP33.65■■■□□ 2.98
PHLDB3-208ENST00000600660 JPH4Q96JJ6 628 aa33.62■■■□□ 2.97
PHLDB3-208ENST00000600660 RUSC2Q8N2Y8 1516 aa33.55■■■□□ 2.96
PHLDB3-208ENST00000600660 KIF13AQ9H1H9 1805 aa33.49■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms