RNA–Protein interactions for RNA: ENST00000556355.5

SRP54-AS1-203, Transcript of SRP54 antisense RNA 1 (head to head), humanhuman

TSL 5 BASIC

Gene SRP54-AS1, Length 603 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-AS1-203ENST00000556355 AEBP2Q6ZN18 517 aaPredicted RBP24.51■■□□□ 1.51
SRP54-AS1-203ENST00000556355 CHIC1Q5VXU3 224 aa23.57■■□□□ 1.36
SRP54-AS1-203ENST00000556355 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
SRP54-AS1-203ENST00000556355 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
SRP54-AS1-203ENST00000556355 FOXD1Q16676 465 aa19.41■□□□□ 0.7
SRP54-AS1-203ENST00000556355 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
SRP54-AS1-203ENST00000556355 PPP6R1Q9UPN7 881 aa18.4■□□□□ 0.54
SRP54-AS1-203ENST00000556355 ADRA2BP18089 450 aa18.37■□□□□ 0.53
SRP54-AS1-203ENST00000556355 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
SRP54-AS1-203ENST00000556355 MSH5O43196 834 aa18.04■□□□□ 0.48
SRP54-AS1-203ENST00000556355 POTEDQ86YR6 584 aa17.25■□□□□ 0.35
SRP54-AS1-203ENST00000556355 SCAF1Q9H7N4 1312 aaKnown RBP16.8■□□□□ 0.28
SRP54-AS1-203ENST00000556355 MAPK8IP2Q13387 824 aaPredicted RBP16.79■□□□□ 0.28
SRP54-AS1-203ENST00000556355 PPP4R3CPQ6ZMV5 832 aa16.69■□□□□ 0.26
SRP54-AS1-203ENST00000556355 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
SRP54-AS1-203ENST00000556355 CNKSR2Q8WXI2 1034 aa16.3■□□□□ 0.2
SRP54-AS1-203ENST00000556355 NCBP3Q53F19 620 aaKnown RBP16.14■□□□□ 0.17
SRP54-AS1-203ENST00000556355 HOXD11P31277 338 aaPredicted RBP16.09■□□□□ 0.17
SRP54-AS1-203ENST00000556355 RNF216Q9NWF9 866 aaPredicted RBP16.06■□□□□ 0.16
SRP54-AS1-203ENST00000556355 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
SRP54-AS1-203ENST00000556355 NPM3O75607 178 aaKnown RBP15.9■□□□□ 0.14
SRP54-AS1-203ENST00000556355 KCNA4P22459 653 aa15.88■□□□□ 0.13
SRP54-AS1-203ENST00000556355 DNAJC5BQ9UF47 199 aa15.44■□□□□ 0.06
SRP54-AS1-203ENST00000556355 RNF39Q9H2S5 420 aa15.42■□□□□ 0.06
SRP54-AS1-203ENST00000556355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.38■□□□□ 0.056e-9■■□□□ 12.6
SRP54-AS1-203ENST00000556355 CACNB1Q02641 598 aaPredicted RBP15.33■□□□□ 0.04
SRP54-AS1-203ENST00000556355 C1QBPQ07021 282 aaKnown RBP15.22■□□□□ 0.03
SRP54-AS1-203ENST00000556355 SLC4A2P04920 1241 aa15.1■□□□□ 0.01
SRP54-AS1-203ENST00000556355 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
SRP54-AS1-203ENST00000556355 U3KPZ7 1027 aaPredicted RBP15.06■□□□□ 0
SRP54-AS1-203ENST00000556355 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
SRP54-AS1-203ENST00000556355 CAPN15O75808 1086 aa14.75□□□□□ -0.05
SRP54-AS1-203ENST00000556355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.74□□□□□ -0.05
SRP54-AS1-203ENST00000556355 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
SRP54-AS1-203ENST00000556355 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
SRP54-AS1-203ENST00000556355 MYCNP04198 464 aaPredicted RBP14.7□□□□□ -0.06
SRP54-AS1-203ENST00000556355 APLP2Q06481 763 aa14.68□□□□□ -0.06
SRP54-AS1-203ENST00000556355 SAMD1Q6SPF0 538 aaPredicted RBP14.67□□□□□ -0.06
SRP54-AS1-203ENST00000556355 ZBTB22O15209 634 aa14.6□□□□□ -0.07
SRP54-AS1-203ENST00000556355 TRHP20396 242 aaPredicted RBP14.6□□□□□ -0.07
SRP54-AS1-203ENST00000556355 DSG3P32926 999 aa14.55□□□□□ -0.08
SRP54-AS1-203ENST00000556355 ZNF219Q9P2Y4 722 aaPredicted RBP14.54□□□□□ -0.08
SRP54-AS1-203ENST00000556355 ABCB7O75027 752 aa14.44□□□□□ -0.1
SRP54-AS1-203ENST00000556355 ATF5Q9Y2D1 282 aaPredicted RBP14.35□□□□□ -0.11
SRP54-AS1-203ENST00000556355 POLA2Q14181 598 aa14.27□□□□□ -0.13
SRP54-AS1-203ENST00000556355 EHMT2Q96KQ7 1210 aa14.24□□□□□ -0.13
SRP54-AS1-203ENST00000556355 ATXN8OSP0DMR3 200 aa14.21□□□□□ -0.13
SRP54-AS1-203ENST00000556355 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
SRP54-AS1-203ENST00000556355 ZBTB12Q9Y330 459 aaPredicted RBP13.96□□□□□ -0.17
SRP54-AS1-203ENST00000556355 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
SRP54-AS1-203ENST00000556355 FBLN2P98095 1184 aa13.78□□□□□ -0.2
SRP54-AS1-203ENST00000556355 OSCARQ8IYS5 282 aa13.78□□□□□ -0.2
SRP54-AS1-203ENST00000556355 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
SRP54-AS1-203ENST00000556355 AKT1S1Q96B36 256 aa13.62□□□□□ -0.23
SRP54-AS1-203ENST00000556355 SPDYE2BA6NHP3 402 aa13.56□□□□□ -0.24
SRP54-AS1-203ENST00000556355 SPDYE6P0CI01 402 aa13.56□□□□□ -0.24
SRP54-AS1-203ENST00000556355 SPDYE2Q495Y8 402 aa13.56□□□□□ -0.24
SRP54-AS1-203ENST00000556355 REM2Q8IYK8 340 aaPredicted RBP13.51□□□□□ -0.25
SRP54-AS1-203ENST00000556355 POTEHQ6S545 545 aa13.49□□□□□ -0.25
SRP54-AS1-203ENST00000556355 ZNF692Q9BU19 519 aaPredicted RBP13.48□□□□□ -0.25
SRP54-AS1-203ENST00000556355 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
SRP54-AS1-203ENST00000556355 SSUH2Q9Y2M2 353 aa13.4□□□□□ -0.26
SRP54-AS1-203ENST00000556355 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
SRP54-AS1-203ENST00000556355 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
SRP54-AS1-203ENST00000556355 SPDYE1Q8NFV5 336 aaPredicted RBP13.26□□□□□ -0.29
SRP54-AS1-203ENST00000556355 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
SRP54-AS1-203ENST00000556355 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
SRP54-AS1-203ENST00000556355 PIP4P2Q8N4L2 257 aa13.21□□□□□ -0.29
SRP54-AS1-203ENST00000556355 FXR2P51116 673 aaKnown RBP eCLIP13.16□□□□□ -0.3
SRP54-AS1-203ENST00000556355 PRR29P0C7W0 189 aa13.07□□□□□ -0.32
SRP54-AS1-203ENST00000556355 PRKAR2AP13861 404 aaKnown RBP13.03□□□□□ -0.32
SRP54-AS1-203ENST00000556355 STAG3Q9UJ98 1225 aa12.97□□□□□ -0.33
SRP54-AS1-203ENST00000556355 CHADLQ6NUI6 762 aa12.96□□□□□ -0.33
SRP54-AS1-203ENST00000556355 HAX1O00165 279 aa12.92□□□□□ -0.34
SRP54-AS1-203ENST00000556355 FKBP8Q14318 412 aa12.89□□□□□ -0.35
SRP54-AS1-203ENST00000556355 PROM2Q8N271 834 aa12.89□□□□□ -0.35
SRP54-AS1-203ENST00000556355 CREBZFQ9NS37 354 aa12.79□□□□□ -0.36
SRP54-AS1-203ENST00000556355 FARP1Q9Y4F1 1045 aaPredicted RBP12.79□□□□□ -0.36
SRP54-AS1-203ENST00000556355 SP7Q8TDD2 431 aaPredicted RBP12.77□□□□□ -0.37
SRP54-AS1-203ENST00000556355 EVX2Q03828 476 aa12.76□□□□□ -0.37
SRP54-AS1-203ENST00000556355 C19orf67A6NJJ6 358 aa12.73□□□□□ -0.37
SRP54-AS1-203ENST00000556355 CD44P16070 742 aaKnown RBP12.63□□□□□ -0.39
SRP54-AS1-203ENST00000556355 MIER1Q8N108 512 aa12.61□□□□□ -0.39
SRP54-AS1-203ENST00000556355 MNX1P50219 401 aaPredicted RBP12.59□□□□□ -0.39
SRP54-AS1-203ENST00000556355 NPM1P06748 294 aaKnown RBP eCLIP12.58□□□□□ -0.4
SRP54-AS1-203ENST00000556355 PLEKHG5O94827 1062 aa12.56□□□□□ -0.4
SRP54-AS1-203ENST00000556355 PLCD3Q8N3E9 789 aa12.55□□□□□ -0.4
SRP54-AS1-203ENST00000556355 FBXO3Q9UK99 471 aa12.52□□□□□ -0.41
SRP54-AS1-203ENST00000556355 ZRANB1Q9UGI0 708 aa12.51□□□□□ -0.41
SRP54-AS1-203ENST00000556355 GABBR2O75899 941 aa12.49□□□□□ -0.41
SRP54-AS1-203ENST00000556355 PAK3O75914 559 aaPredicted RBP12.48□□□□□ -0.41
SRP54-AS1-203ENST00000556355 ZNF579Q8NAF0 562 aaKnown RBP12.42□□□□□ -0.42
SRP54-AS1-203ENST00000556355 ZBTB47Q9UFB7 747 aaPredicted RBP12.4□□□□□ -0.42
SRP54-AS1-203ENST00000556355 TSPYL2Q9H2G4 693 aaPredicted RBP12.39□□□□□ -0.43
SRP54-AS1-203ENST00000556355 CLCN6P51797 869 aa12.36□□□□□ -0.43
SRP54-AS1-203ENST00000556355 PHF12Q96QT6 1004 aa12.36□□□□□ -0.43
SRP54-AS1-203ENST00000556355 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
SRP54-AS1-203ENST00000556355 RASEFQ8IZ41 740 aa12.33□□□□□ -0.44
SRP54-AS1-203ENST00000556355 GALR2O43603 387 aaPredicted RBP12.28□□□□□ -0.44
SRP54-AS1-203ENST00000556355 NUBP1P53384 320 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms