RNA–Protein interactions for RNA: ENST00000560335.5

NUMB-232, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best) BASIC

Gene NUMB, Length 1,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-232ENST00000560335 NISCHQ9Y2I1 1504 aa15.3■□□□□ 0.04
NUMB-232ENST00000560335 CCDC180Q9P1Z9 1646 aa13.47□□□□□ -0.25
NUMB-232ENST00000560335 ABCC9O60706 1549 aa13.12□□□□□ -0.31
NUMB-232ENST00000560335 AEBP2Q6ZN18 517 aaPredicted RBP12.97□□□□□ -0.33
NUMB-232ENST00000560335 ZCCHC6Q5VYS8 1495 aaKnown RBP12.83□□□□□ -0.36
NUMB-232ENST00000560335 DCAF8L2P0C7V8 631 aa12.73□□□□□ -0.37
NUMB-232ENST00000560335 NACADO15069 1562 aa12.62□□□□□ -0.39
NUMB-232ENST00000560335 RB1CC1Q8TDY2 1594 aa12.62□□□□□ -0.39
NUMB-232ENST00000560335 DCAF1Q9Y4B6 1507 aa12.61□□□□□ -0.39
NUMB-232ENST00000560335 MYO15BQ96JP2 1530 aa12.56□□□□□ -0.4
NUMB-232ENST00000560335 SHROOM4Q9ULL8 1493 aa12.44□□□□□ -0.42
NUMB-232ENST00000560335 UNC13AQ9UPW8 1703 aa12.44□□□□□ -0.42
NUMB-232ENST00000560335 SCRIBQ14160 1630 aa12.37□□□□□ -0.43
NUMB-232ENST00000560335 PABPN1Q86U42 306 aaKnown RBP eCLIP12.3□□□□□ -0.44
NUMB-232ENST00000560335 BICRAQ9NZM4 1560 aa12.3□□□□□ -0.44
NUMB-232ENST00000560335 SUPT5HO00267 1087 aaKnown RBP12.2□□□□□ -0.46
NUMB-232ENST00000560335 CHIC1Q5VXU3 224 aa12.13□□□□□ -0.47
NUMB-232ENST00000560335 DNAJC5BQ9UF47 199 aa11.99□□□□□ -0.49
NUMB-232ENST00000560335 CECR2Q9BXF3 1484 aa11.96□□□□□ -0.5
NUMB-232ENST00000560335 EIF4G1Q04637 1599 aaKnown RBP11.93□□□□□ -0.5
NUMB-232ENST00000560335 CC2D2AQ9P2K1 1620 aa11.87□□□□□ -0.51
NUMB-232ENST00000560335 MROH2BQ7Z745 1585 aa11.86□□□□□ -0.51
NUMB-232ENST00000560335 RSF1Q96T23 1441 aaPredicted RBP11.86□□□□□ -0.51
NUMB-232ENST00000560335 SMARCA4P51532 1647 aa11.81□□□□□ -0.52
NUMB-232ENST00000560335 BAZ1AQ9NRL2 1556 aaPredicted RBP11.8□□□□□ -0.52
NUMB-232ENST00000560335 WIZO95785 1651 aa11.76□□□□□ -0.53
NUMB-232ENST00000560335 ATAD2BQ9ULI0 1458 aa11.71□□□□□ -0.54
NUMB-232ENST00000560335 PEG3Q9GZU2 1588 aa11.67□□□□□ -0.54
NUMB-232ENST00000560335 NCAPD3P42695 1498 aa11.67□□□□□ -0.54
NUMB-232ENST00000560335 SMARCA2P51531 1590 aa11.66□□□□□ -0.54
NUMB-232ENST00000560335 HMGXB3Q12766 1538 aa11.61□□□□□ -0.55
NUMB-232ENST00000560335 BAZ1BQ9UIG0 1483 aaKnown RBP11.6□□□□□ -0.55
NUMB-232ENST00000560335 TOP2AP11388 1531 aaKnown RBP11.58□□□□□ -0.56
NUMB-232ENST00000560335 TRIM41Q8WV44 630 aa11.54□□□□□ -0.56
NUMB-232ENST00000560335 CCDC88BA6NC98 1476 aa11.48□□□□□ -0.57
NUMB-232ENST00000560335 POTEDQ86YR6 584 aa11.43□□□□□ -0.58
NUMB-232ENST00000560335 NESP48681 1621 aa11.42□□□□□ -0.58
NUMB-232ENST00000560335 LOC105371045A0A1W2PR82 267 aa11.4□□□□□ -0.58
NUMB-232ENST00000560335 HRCP23327 699 aa11.4□□□□□ -0.58
NUMB-232ENST00000560335 TRIM26Q12899 539 aaPredicted RBP11.35□□□□□ -0.59
NUMB-232ENST00000560335 PCGF6Q9BYE7 350 aa11.34□□□□□ -0.59
NUMB-232ENST00000560335 CADPSQ9ULU8 1353 aa11.33□□□□□ -0.59
NUMB-232ENST00000560335 EEA1Q15075 1411 aa11.33□□□□□ -0.6
NUMB-232ENST00000560335 LAMC3Q9Y6N6 1575 aa11.32□□□□□ -0.6
NUMB-232ENST00000560335 CFTRP13569 1480 aa11.3□□□□□ -0.6
NUMB-232ENST00000560335 KIF21AQ7Z4S6 1674 aa11.28□□□□□ -0.6
NUMB-232ENST00000560335 ERCC6Q03468 1493 aa11.25□□□□□ -0.61
NUMB-232ENST00000560335 SENP3Q9H4L4 574 aaPredicted RBP11.24□□□□□ -0.61
NUMB-232ENST00000560335 PRDM2Q13029 1718 aa11.24□□□□□ -0.61
NUMB-232ENST00000560335 PDS5BQ9NTI5 1447 aa11.23□□□□□ -0.61
NUMB-232ENST00000560335 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
NUMB-232ENST00000560335 FANCD2Q9BXW9 1451 aa11.22□□□□□ -0.61
NUMB-232ENST00000560335 ZEB1P37275 1124 aaPredicted RBP11.2□□□□□ -0.62
NUMB-232ENST00000560335 FAM9AQ8IZU1 332 aaPredicted RBP11.2□□□□□ -0.62
NUMB-232ENST00000560335 THOC2Q8NI27 1593 aaKnown RBP11.18□□□□□ -0.62
NUMB-232ENST00000560335 WRNQ14191 1432 aaPredicted RBP eCLIP11.18□□□□□ -0.62
NUMB-232ENST00000560335 CEP164Q9UPV0 1460 aa11.17□□□□□ -0.62
NUMB-232ENST00000560335 TNIKQ9UKE5 1360 aa11.15□□□□□ -0.62
NUMB-232ENST00000560335 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
NUMB-232ENST00000560335 MRC2Q9UBG0 1479 aa11.13□□□□□ -0.63
NUMB-232ENST00000560335 URB2Q14146 1524 aaKnown RBP11.12□□□□□ -0.63
NUMB-232ENST00000560335 CSRNP3Q8WYN3 585 aa11.11□□□□□ -0.63
NUMB-232ENST00000560335 GOLGA3Q08378 1498 aa11.11□□□□□ -0.63
NUMB-232ENST00000560335 WDR62O43379 1518 aa11.1□□□□□ -0.63
NUMB-232ENST00000560335 CUX1P39880 1505 aa11.09□□□□□ -0.63
NUMB-232ENST00000560335 SOGA1O94964 1423 aa11.08□□□□□ -0.64
NUMB-232ENST00000560335 KIF21BO75037 1637 aa11.08□□□□□ -0.64
NUMB-232ENST00000560335 CEP162Q5TB80 1403 aa11.07□□□□□ -0.64
NUMB-232ENST00000560335 CUX2O14529 1486 aa11.06□□□□□ -0.64
NUMB-232ENST00000560335 TOPBP1Q92547 1522 aa11.05□□□□□ -0.64
NUMB-232ENST00000560335 TOP2BQ02880 1626 aa11.05□□□□□ -0.64
NUMB-232ENST00000560335 BIVM-ERCC5R4GMW8 1640 aa11.05□□□□□ -0.64
NUMB-232ENST00000560335 DNMBPQ6XZF7 1577 aa11.04□□□□□ -0.64
NUMB-232ENST00000560335 DNAJC5Q9H3Z4 198 aa11□□□□□ -0.65
NUMB-232ENST00000560335 POLA1P09884 1462 aaPredicted RBP10.98□□□□□ -0.65
NUMB-232ENST00000560335 FGD5Q6ZNL6 1462 aa10.98□□□□□ -0.65
NUMB-232ENST00000560335 UBTFP17480 764 aaKnown RBP10.97□□□□□ -0.65
NUMB-232ENST00000560335 ERICH3Q5RHP9 1530 aa10.96□□□□□ -0.65
NUMB-232ENST00000560335 RUSC2Q8N2Y8 1516 aa10.96□□□□□ -0.65
NUMB-232ENST00000560335 RAD54L2Q9Y4B4 1467 aa10.96□□□□□ -0.66
NUMB-232ENST00000560335 TARBP1Q13395 1621 aaKnown RBP10.95□□□□□ -0.66
NUMB-232ENST00000560335 ZNF608Q9ULD9 1512 aaPredicted RBP10.94□□□□□ -0.66
NUMB-232ENST00000560335 EHMT2Q96KQ7 1210 aa10.94□□□□□ -0.66
NUMB-232ENST00000560335 PHF23Q9BUL5 403 aaPredicted RBP10.92□□□□□ -0.66
NUMB-232ENST00000560335 IFT140Q96RY7 1462 aa10.92□□□□□ -0.66
NUMB-232ENST00000560335 CLIP1P30622 1438 aa10.91□□□□□ -0.66
NUMB-232ENST00000560335 PRXQ9BXM0 1461 aa10.9□□□□□ -0.67
NUMB-232ENST00000560335 KIF27Q86VH2 1401 aa10.89□□□□□ -0.67
NUMB-232ENST00000560335 VPS8Q8N3P4 1428 aa10.89□□□□□ -0.67
NUMB-232ENST00000560335 AQRO60306 1485 aaKnown RBP eCLIP10.89□□□□□ -0.671e-6■■■□□ 18.1
NUMB-232ENST00000560335 PPARGC1BQ86YN6 1023 aaKnown RBP10.89□□□□□ -0.67
NUMB-232ENST00000560335 WDR97A6NE52 1622 aa10.89□□□□□ -0.67
NUMB-232ENST00000560335 TDRD9Q8NDG6 1382 aaKnown RBP10.88□□□□□ -0.67
NUMB-232ENST00000560335 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
NUMB-232ENST00000560335 RAPGEF2Q9Y4G8 1499 aa10.86□□□□□ -0.67
NUMB-232ENST00000560335 ABCA10Q8WWZ4 1543 aa10.85□□□□□ -0.67
NUMB-232ENST00000560335 APLP2Q06481 763 aa10.82□□□□□ -0.68
NUMB-232ENST00000560335 ABCA5Q8WWZ7 1642 aa10.81□□□□□ -0.68
NUMB-232ENST00000560335 CCER1Q8TC90 406 aaPredicted RBP10.8□□□□□ -0.68
NUMB-232ENST00000560335 GAPVD1Q14C86 1478 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms