RNA–Protein interactions for RNA: ENST00000422877.1

SEC23B-205, Transcript of Sec23 homolog B, coat complex II component, humanhuman

TSL 3

Gene SEC23B, Length 834 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23B-205ENST00000422877 NISCHQ9Y2I1 1504 aa33.74■■■□□ 2.99
SEC23B-205ENST00000422877 CCDC180Q9P1Z9 1646 aa30.14■■■□□ 2.42
SEC23B-205ENST00000422877 ABCC9O60706 1549 aa29.16■■■□□ 2.26
SEC23B-205ENST00000422877 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
SEC23B-205ENST00000422877 NACADO15069 1562 aa28.24■■■□□ 2.11
SEC23B-205ENST00000422877 ZCCHC6Q5VYS8 1495 aaKnown RBP28.15■■■□□ 2.1
SEC23B-205ENST00000422877 MYO15BQ96JP2 1530 aa28.13■■■□□ 2.09
SEC23B-205ENST00000422877 DCAF1Q9Y4B6 1507 aa28.02■■■□□ 2.08
SEC23B-205ENST00000422877 DCAF8L2P0C7V8 631 aa27.9■■■□□ 2.06
SEC23B-205ENST00000422877 UNC13AQ9UPW8 1703 aa27.73■■■□□ 2.03
SEC23B-205ENST00000422877 BICRAQ9NZM4 1560 aa27.36■■□□□ 1.97
SEC23B-205ENST00000422877 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
SEC23B-205ENST00000422877 SHROOM4Q9ULL8 1493 aa27.18■■□□□ 1.94
SEC23B-205ENST00000422877 PABPN1Q86U42 306 aaKnown RBP eCLIP27.16■■□□□ 1.94
SEC23B-205ENST00000422877 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
SEC23B-205ENST00000422877 DNAJC5BQ9UF47 199 aa26.62■■□□□ 1.85
SEC23B-205ENST00000422877 CC2D2AQ9P2K1 1620 aa26.5■■□□□ 1.83
SEC23B-205ENST00000422877 CECR2Q9BXF3 1484 aa26.23■■□□□ 1.79
SEC23B-205ENST00000422877 SMARCA4P51532 1647 aa26.22■■□□□ 1.79
SEC23B-205ENST00000422877 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
SEC23B-205ENST00000422877 SMARCA2P51531 1590 aa26.03■■□□□ 1.76
SEC23B-205ENST00000422877 PEG3Q9GZU2 1588 aa26.01■■□□□ 1.75
SEC23B-205ENST00000422877 NCAPD3P42695 1498 aa25.98■■□□□ 1.75
SEC23B-205ENST00000422877 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
SEC23B-205ENST00000422877 MROH2BQ7Z745 1585 aa25.96■■□□□ 1.75
SEC23B-205ENST00000422877 HMGXB3Q12766 1538 aa25.94■■□□□ 1.74
SEC23B-205ENST00000422877 BAZ1BQ9UIG0 1483 aaKnown RBP25.78■■□□□ 1.72
SEC23B-205ENST00000422877 WIZO95785 1651 aa25.74■■□□□ 1.71
SEC23B-205ENST00000422877 RSF1Q96T23 1441 aaPredicted RBP25.66■■□□□ 1.7
SEC23B-205ENST00000422877 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
SEC23B-205ENST00000422877 LAMC3Q9Y6N6 1575 aa25.37■■□□□ 1.65
SEC23B-205ENST00000422877 NESP48681 1621 aa25.26■■□□□ 1.63
SEC23B-205ENST00000422877 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
SEC23B-205ENST00000422877 ERCC6Q03468 1493 aa25.16■■□□□ 1.62
SEC23B-205ENST00000422877 PRDM2Q13029 1718 aa25.16■■□□□ 1.62
SEC23B-205ENST00000422877 KIF21AQ7Z4S6 1674 aa25.13■■□□□ 1.61
SEC23B-205ENST00000422877 PDS5BQ9NTI5 1447 aa25.1■■□□□ 1.61
SEC23B-205ENST00000422877 CCDC88BA6NC98 1476 aa25.09■■□□□ 1.61
SEC23B-205ENST00000422877 CFTRP13569 1480 aa25.09■■□□□ 1.61
SEC23B-205ENST00000422877 THOC2Q8NI27 1593 aaKnown RBP25.02■■□□□ 1.6
SEC23B-205ENST00000422877 CUX2O14529 1486 aa24.97■■□□□ 1.59
SEC23B-205ENST00000422877 FANCD2Q9BXW9 1451 aa24.91■■□□□ 1.58
SEC23B-205ENST00000422877 CEP164Q9UPV0 1460 aa24.9■■□□□ 1.58
SEC23B-205ENST00000422877 SUPT5HO00267 1087 aaKnown RBP24.89■■□□□ 1.58
SEC23B-205ENST00000422877 MRC2Q9UBG0 1479 aa24.85■■□□□ 1.57
SEC23B-205ENST00000422877 WDR62O43379 1518 aa24.82■■□□□ 1.56
SEC23B-205ENST00000422877 DNAJC5Q9H3Z4 198 aa24.81■■□□□ 1.56
SEC23B-205ENST00000422877 URB2Q14146 1524 aaKnown RBP24.66■■□□□ 1.54
SEC23B-205ENST00000422877 ABCC8Q09428 1581 aa24.6■■□□□ 1.53
SEC23B-205ENST00000422877 DNMBPQ6XZF7 1577 aa24.57■■□□□ 1.52
SEC23B-205ENST00000422877 TOPBP1Q92547 1522 aa24.54■■□□□ 1.52
SEC23B-205ENST00000422877 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
SEC23B-205ENST00000422877 CUX1P39880 1505 aa24.36■■□□□ 1.49
SEC23B-205ENST00000422877 POLA1P09884 1462 aaPredicted RBP24.33■■□□□ 1.49
SEC23B-205ENST00000422877 TARBP1Q13395 1621 aaKnown RBP24.33■■□□□ 1.49
SEC23B-205ENST00000422877 BIVM-ERCC5R4GMW8 1640 aa24.29■■□□□ 1.48
SEC23B-205ENST00000422877 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
SEC23B-205ENST00000422877 TOP2BQ02880 1626 aa24.25■■□□□ 1.47
SEC23B-205ENST00000422877 WDR97A6NE52 1622 aa24.24■■□□□ 1.47
SEC23B-205ENST00000422877 EIF4G3O43432 1585 aaKnown RBP24.23■■□□□ 1.47
SEC23B-205ENST00000422877 WRNQ14191 1432 aaPredicted RBP eCLIP24.21■■□□□ 1.47
SEC23B-205ENST00000422877 ZNF608Q9ULD9 1512 aaPredicted RBP24.2■■□□□ 1.46
SEC23B-205ENST00000422877 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
SEC23B-205ENST00000422877 SOGA1O94964 1423 aa24.18■■□□□ 1.46
SEC23B-205ENST00000422877 RAD54L2Q9Y4B4 1467 aa24.15■■□□□ 1.46
SEC23B-205ENST00000422877 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
SEC23B-205ENST00000422877 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
SEC23B-205ENST00000422877 AQRO60306 1485 aaKnown RBP eCLIP24.04■■□□□ 1.44
SEC23B-205ENST00000422877 PBRM1Q86U86 1689 aa24.04■■□□□ 1.44
SEC23B-205ENST00000422877 TDRD9Q8NDG6 1382 aaKnown RBP23.98■■□□□ 1.43
SEC23B-205ENST00000422877 CHD1O14646 1710 aa23.96■■□□□ 1.43
SEC23B-205ENST00000422877 GRIN2BQ13224 1484 aa23.94■■□□□ 1.42
SEC23B-205ENST00000422877 GAPVD1Q14C86 1478 aa23.94■■□□□ 1.42
SEC23B-205ENST00000422877 MAGI1Q96QZ7 1491 aaPredicted RBP23.92■■□□□ 1.42
SEC23B-205ENST00000422877 SNAPC4Q5SXM2 1469 aa23.87■■□□□ 1.41
SEC23B-205ENST00000422877 ERICH3Q5RHP9 1530 aa23.82■■□□□ 1.4
SEC23B-205ENST00000422877 OSCARQ8IYS5 282 aa23.81■■□□□ 1.4
SEC23B-205ENST00000422877 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
SEC23B-205ENST00000422877 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
SEC23B-205ENST00000422877 KIF27Q86VH2 1401 aa23.7■■□□□ 1.38
SEC23B-205ENST00000422877 CUL7Q14999 1698 aa23.68■■□□□ 1.38
SEC23B-205ENST00000422877 FHAD1B1AJZ9 1412 aa23.67■■□□□ 1.38
SEC23B-205ENST00000422877 CHMP7Q8WUX9 453 aaPredicted RBP23.66■■□□□ 1.38
SEC23B-205ENST00000422877 FBLN2P98095 1184 aa23.65■■□□□ 1.38
SEC23B-205ENST00000422877 CLASP1Q7Z460 1538 aa23.64■■□□□ 1.38
SEC23B-205ENST00000422877 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
SEC23B-205ENST00000422877 TRIM41Q8WV44 630 aa23.57■■□□□ 1.36
SEC23B-205ENST00000422877 RIMBP3CA6NJZ7 1639 aa23.55■■□□□ 1.36
SEC23B-205ENST00000422877 RIMBP3BA6NNM3 1639 aa23.55■■□□□ 1.36
SEC23B-205ENST00000422877 RIMBP3Q9UFD9 1639 aa23.55■■□□□ 1.36
SEC23B-205ENST00000422877 IGF1RP08069 1367 aa23.54■■□□□ 1.36
SEC23B-205ENST00000422877 CEP170Q5SW79 1584 aa23.54■■□□□ 1.36
SEC23B-205ENST00000422877 NUP160Q12769 1436 aa23.53■■□□□ 1.36
SEC23B-205ENST00000422877 ARHGEF11O15085 1522 aa23.52■■□□□ 1.36
SEC23B-205ENST00000422877 SHROOM2Q13796 1616 aa23.45■■□□□ 1.34
SEC23B-205ENST00000422877 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
SEC23B-205ENST00000422877 CARMIL1Q5VZK9 1371 aa23.41■■□□□ 1.34
SEC23B-205ENST00000422877 EEA1Q15075 1411 aa23.34■■□□□ 1.33
SEC23B-205ENST00000422877 RAPGEF2Q9Y4G8 1499 aa23.34■■□□□ 1.33
SEC23B-205ENST00000422877 CHIC1Q5VXU3 224 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms