RNA–Protein interactions for RNA: ENST00000314471.10

SAMD4B-201, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SAMD4B, Length 4,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-201ENST00000314471 NISCHQ9Y2I1 1504 aa29.21■■■□□ 2.27
SAMD4B-201ENST00000314471 SHROOM4Q9ULL8 1493 aa25.01■■□□□ 1.59
SAMD4B-201ENST00000314471 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
SAMD4B-201ENST00000314471 ZCCHC6Q5VYS8 1495 aaKnown RBP24.7■■□□□ 1.54
SAMD4B-201ENST00000314471 SUPT5HO00267 1087 aaKnown RBP24.67■■□□□ 1.54
SAMD4B-201ENST00000314471 DCAF8L2P0C7V8 631 aa24.49■■□□□ 1.51
SAMD4B-201ENST00000314471 DCAF1Q9Y4B6 1507 aa24■■□□□ 1.43
SAMD4B-201ENST00000314471 CHIC1Q5VXU3 224 aa23.9■■□□□ 1.42
SAMD4B-201ENST00000314471 MYO15BQ96JP2 1530 aa23.58■■□□□ 1.37
SAMD4B-201ENST00000314471 HRCP23327 699 aa23.33■■□□□ 1.33
SAMD4B-201ENST00000314471 PCGF6Q9BYE7 350 aa23.32■■□□□ 1.32
SAMD4B-201ENST00000314471 ABCC9O60706 1549 aa23.31■■□□□ 1.32
SAMD4B-201ENST00000314471 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
SAMD4B-201ENST00000314471 LOC105371045A0A1W2PR82 267 aa23.15■■□□□ 1.3
SAMD4B-201ENST00000314471 RSF1Q96T23 1441 aaPredicted RBP23.13■■□□□ 1.29
SAMD4B-201ENST00000314471 TRIM41Q8WV44 630 aa23.06■■□□□ 1.28
SAMD4B-201ENST00000314471 NACADO15069 1562 aa23.02■■□□□ 1.28
SAMD4B-201ENST00000314471 TRIM26Q12899 539 aaPredicted RBP22.94■■□□□ 1.26
SAMD4B-201ENST00000314471 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
SAMD4B-201ENST00000314471 FAM9AQ8IZU1 332 aaPredicted RBP22.8■■□□□ 1.24
SAMD4B-201ENST00000314471 CECR2Q9BXF3 1484 aa22.7■■□□□ 1.22
SAMD4B-201ENST00000314471 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
SAMD4B-201ENST00000314471 ZEB1P37275 1124 aaPredicted RBP22.65■■□□□ 1.22
SAMD4B-201ENST00000314471 MROH2BQ7Z745 1585 aa22.65■■□□□ 1.22
SAMD4B-201ENST00000314471 EHMT2Q96KQ7 1210 aa22.57■■□□□ 1.2
SAMD4B-201ENST00000314471 BAZ1AQ9NRL2 1556 aaPredicted RBP22.52■■□□□ 1.2
SAMD4B-201ENST00000314471 WIZO95785 1651 aa22.49■■□□□ 1.19
SAMD4B-201ENST00000314471 TOP2AP11388 1531 aaKnown RBP22.28■■□□□ 1.16
SAMD4B-201ENST00000314471 SMARCA4P51532 1647 aa22.22■■□□□ 1.15
SAMD4B-201ENST00000314471 CCDC88BA6NC98 1476 aa22.15■■□□□ 1.14
SAMD4B-201ENST00000314471 EIF4G1Q04637 1599 aaKnown RBP22.11■■□□□ 1.13
SAMD4B-201ENST00000314471 SMARCA2P51531 1590 aa22.07■■□□□ 1.12
SAMD4B-201ENST00000314471 ABCC8Q09428 1581 aa22.05■■□□□ 1.12
SAMD4B-201ENST00000314471 CCER1Q8TC90 406 aaPredicted RBP22.05■■□□□ 1.12
SAMD4B-201ENST00000314471 EEA1Q15075 1411 aa22.04■■□□□ 1.12
SAMD4B-201ENST00000314471 PABPN1Q86U42 306 aaKnown RBP eCLIP22.03■■□□□ 1.12
SAMD4B-201ENST00000314471 UBTFP17480 764 aaKnown RBP22.01■■□□□ 1.11
SAMD4B-201ENST00000314471 CSRNP3Q8WYN3 585 aa21.98■■□□□ 1.11
SAMD4B-201ENST00000314471 UNC13AQ9UPW8 1703 aa21.97■■□□□ 1.11
SAMD4B-201ENST00000314471 TNIKQ9UKE5 1360 aa21.94■■□□□ 1.1
SAMD4B-201ENST00000314471 CEP162Q5TB80 1403 aa21.94■■□□□ 1.1
SAMD4B-201ENST00000314471 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.91■■□□□ 1.1
SAMD4B-201ENST00000314471 WRNQ14191 1432 aaPredicted RBP eCLIP21.9■■□□□ 1.1
SAMD4B-201ENST00000314471 SOGA1O94964 1423 aa21.9■■□□□ 1.1
SAMD4B-201ENST00000314471 TTBK1Q5TCY1 1321 aaPredicted RBP21.89■■□□□ 1.09
SAMD4B-201ENST00000314471 GOLGA3Q08378 1498 aa21.84■■□□□ 1.09
SAMD4B-201ENST00000314471 BICRAQ9NZM4 1560 aa21.77■■□□□ 1.08
SAMD4B-201ENST00000314471 PEG3Q9GZU2 1588 aa21.75■■□□□ 1.07
SAMD4B-201ENST00000314471 APLP2Q06481 763 aa21.74■■□□□ 1.07
SAMD4B-201ENST00000314471 BAZ1BQ9UIG0 1483 aaKnown RBP21.73■■□□□ 1.07
SAMD4B-201ENST00000314471 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
SAMD4B-201ENST00000314471 RUSC2Q8N2Y8 1516 aa21.69■■□□□ 1.06
SAMD4B-201ENST00000314471 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
SAMD4B-201ENST00000314471 CLIP1P30622 1438 aa21.59■■□□□ 1.05
SAMD4B-201ENST00000314471 DIEXFQ68CQ4 756 aaKnown RBP21.56■■□□□ 1.04
SAMD4B-201ENST00000314471 KIF21BO75037 1637 aa21.55■■□□□ 1.04
SAMD4B-201ENST00000314471 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
SAMD4B-201ENST00000314471 CENPBP07199 599 aaPredicted RBP21.52■■□□□ 1.04
SAMD4B-201ENST00000314471 RANGAP1P46060 587 aaPredicted RBP21.48■■□□□ 1.03
SAMD4B-201ENST00000314471 PELP1Q8IZL8 1130 aaKnown RBP21.48■■□□□ 1.03
SAMD4B-201ENST00000314471 HNRNPUL2Q1KMD3 747 aaKnown RBP21.47■■□□□ 1.03
SAMD4B-201ENST00000314471 VPS8Q8N3P4 1428 aa21.46■■□□□ 1.03
SAMD4B-201ENST00000314471 SCAF1Q9H7N4 1312 aaKnown RBP21.41■■□□□ 1.02
SAMD4B-201ENST00000314471 ZNF316A6NFI3 1004 aaPredicted RBP21.4■■□□□ 1.02
SAMD4B-201ENST00000314471 RAPGEF2Q9Y4G8 1499 aa21.38■■□□□ 1.01
SAMD4B-201ENST00000314471 ACIN1Q9UKV3 1341 aaKnown RBP21.37■■□□□ 1.01
SAMD4B-201ENST00000314471 TOP2BQ02880 1626 aa21.36■■□□□ 1.01
SAMD4B-201ENST00000314471 NCAPD3P42695 1498 aa21.27■■□□□ 1
SAMD4B-201ENST00000314471 HMGXB3Q12766 1538 aa21.27■□□□□ 0.99
SAMD4B-201ENST00000314471 KIF27Q86VH2 1401 aa21.25■□□□□ 0.99
SAMD4B-201ENST00000314471 ERICH3Q5RHP9 1530 aa21.24■□□□□ 0.99
SAMD4B-201ENST00000314471 BIVM-ERCC5R4GMW8 1640 aa21.23■□□□□ 0.99
SAMD4B-201ENST00000314471 NEUROD1Q13562 356 aa21.22■□□□□ 0.99
SAMD4B-201ENST00000314471 PRXQ9BXM0 1461 aa21.17■□□□□ 0.98
SAMD4B-201ENST00000314471 GTF3C3Q9Y5Q9 886 aa21.12■□□□□ 0.97
SAMD4B-201ENST00000314471 CLSPNQ9HAW4 1339 aa21.12■□□□□ 0.97
SAMD4B-201ENST00000314471 CFTRP13569 1480 aa21.1■□□□□ 0.97
SAMD4B-201ENST00000314471 CUX1P39880 1505 aa21.09■□□□□ 0.97
SAMD4B-201ENST00000314471 YTHDC1Q96MU7 727 aaKnown RBP21.07■□□□□ 0.96
SAMD4B-201ENST00000314471 ARAP1Q96P48 1450 aa21.05■□□□□ 0.96
SAMD4B-201ENST00000314471 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
SAMD4B-201ENST00000314471 CUX2O14529 1486 aa20.97■□□□□ 0.95
SAMD4B-201ENST00000314471 MIER1Q8N108 512 aa20.96■□□□□ 0.95
SAMD4B-201ENST00000314471 CADPSQ9ULU8 1353 aa20.93■□□□□ 0.94
SAMD4B-201ENST00000314471 CCNB3Q8WWL7 1395 aa20.93■□□□□ 0.94
SAMD4B-201ENST00000314471 DHX57Q6P158 1386 aaKnown RBP20.92■□□□□ 0.94
SAMD4B-201ENST00000314471 ITGAEP38570 1179 aa20.92■□□□□ 0.94
SAMD4B-201ENST00000314471 RRBP1Q9P2E9 1410 aaKnown RBP20.91■□□□□ 0.94
SAMD4B-201ENST00000314471 ARHGAP35Q9NRY4 1499 aa20.89■□□□□ 0.93
SAMD4B-201ENST00000314471 CARMIL1Q5VZK9 1371 aa20.88■□□□□ 0.93
SAMD4B-201ENST00000314471 IGF1RP08069 1367 aa20.87■□□□□ 0.93
SAMD4B-201ENST00000314471 ATP1B4Q9UN42 357 aaPredicted RBP20.83■□□□□ 0.92
SAMD4B-201ENST00000314471 PRDM2Q13029 1718 aa20.82■□□□□ 0.92
SAMD4B-201ENST00000314471 FHAD1B1AJZ9 1412 aa20.8■□□□□ 0.92
SAMD4B-201ENST00000314471 FGD5Q6ZNL6 1462 aa20.8■□□□□ 0.92
SAMD4B-201ENST00000314471 FAM50AQ14320 339 aaKnown RBP20.75■□□□□ 0.91
SAMD4B-201ENST00000314471 MAP3K1Q13233 1512 aa20.74■□□□□ 0.91
SAMD4B-201ENST00000314471 FANCD2Q9BXW9 1451 aa20.71■□□□□ 0.91
SAMD4B-201ENST00000314471 TIAM1Q13009 1591 aa20.71■□□□□ 0.91
SAMD4B-201ENST00000314471 P3H3Q8IVL6 736 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms