RNA–Protein interactions for RNA: ENST00000394431.6

PSMD6-202, Transcript of proteasome 26S subunit, non-ATPase 6, humanhuman

TSL 1 (best) BASIC

Gene PSMD6, Length 1,349 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD6-202ENST00000394431 AEBP2Q6ZN18 517 aaPredicted RBP24.7■■□□□ 1.54
PSMD6-202ENST00000394431 CHIC1Q5VXU3 224 aa23.4■■□□□ 1.34
PSMD6-202ENST00000394431 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
PSMD6-202ENST00000394431 PHF23Q9BUL5 403 aaPredicted RBP20.78■□□□□ 0.92
PSMD6-202ENST00000394431 FOXD1Q16676 465 aa19.64■□□□□ 0.73
PSMD6-202ENST00000394431 PLPPR3Q6T4P5 718 aa18.68■□□□□ 0.58
PSMD6-202ENST00000394431 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
PSMD6-202ENST00000394431 PIAS4Q8N2W9 510 aaPredicted RBP18.35■□□□□ 0.53
PSMD6-202ENST00000394431 ADRA2BP18089 450 aa18.34■□□□□ 0.53
PSMD6-202ENST00000394431 MSH5O43196 834 aa18.29■□□□□ 0.52
PSMD6-202ENST00000394431 POTEDQ86YR6 584 aa17.95■□□□□ 0.46
PSMD6-202ENST00000394431 MAPK8IP2Q13387 824 aaPredicted RBP16.87■□□□□ 0.29
PSMD6-202ENST00000394431 SCAF1Q9H7N4 1312 aaKnown RBP16.68■□□□□ 0.26
PSMD6-202ENST00000394431 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
PSMD6-202ENST00000394431 PPP4R3CPQ6ZMV5 832 aa16.43■□□□□ 0.22
PSMD6-202ENST00000394431 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
PSMD6-202ENST00000394431 CNKSR2Q8WXI2 1034 aa16.07■□□□□ 0.16
PSMD6-202ENST00000394431 HOXD11P31277 338 aaPredicted RBP16.03■□□□□ 0.16
PSMD6-202ENST00000394431 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
PSMD6-202ENST00000394431 CACNB1Q02641 598 aaPredicted RBP15.79■□□□□ 0.12
PSMD6-202ENST00000394431 NCBP3Q53F19 620 aaKnown RBP15.73■□□□□ 0.11
PSMD6-202ENST00000394431 RNF39Q9H2S5 420 aa15.64■□□□□ 0.09
PSMD6-202ENST00000394431 NPM3O75607 178 aaKnown RBP15.55■□□□□ 0.08
PSMD6-202ENST00000394431 C1QBPQ07021 282 aaKnown RBP15.39■□□□□ 0.05
PSMD6-202ENST00000394431 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
PSMD6-202ENST00000394431 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.34■□□□□ 0.055e-10■■■□□ 15.2
PSMD6-202ENST00000394431 KCNA4P22459 653 aa15.29■□□□□ 0.04
PSMD6-202ENST00000394431 U3KPZ7 1027 aaPredicted RBP15□□□□□ -0.01
PSMD6-202ENST00000394431 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
PSMD6-202ENST00000394431 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
PSMD6-202ENST00000394431 CAPN15O75808 1086 aa14.8□□□□□ -0.04
PSMD6-202ENST00000394431 DSG3P32926 999 aa14.66□□□□□ -0.06
PSMD6-202ENST00000394431 TRHP20396 242 aaPredicted RBP14.58□□□□□ -0.08
PSMD6-202ENST00000394431 ABCB7O75027 752 aa14.49□□□□□ -0.09
PSMD6-202ENST00000394431 APLP2Q06481 763 aa14.49□□□□□ -0.09
PSMD6-202ENST00000394431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.48□□□□□ -0.09
PSMD6-202ENST00000394431 HNRNPUL2Q1KMD3 747 aaKnown RBP14.48□□□□□ -0.09
PSMD6-202ENST00000394431 ZNF219Q9P2Y4 722 aaPredicted RBP14.44□□□□□ -0.1
PSMD6-202ENST00000394431 SAMD1Q6SPF0 538 aaPredicted RBP14.42□□□□□ -0.1
PSMD6-202ENST00000394431 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
PSMD6-202ENST00000394431 MYCNP04198 464 aaPredicted RBP14.35□□□□□ -0.11
PSMD6-202ENST00000394431 FOXD4L1Q9NU39 408 aa14.21□□□□□ -0.13
PSMD6-202ENST00000394431 POLA2Q14181 598 aa14.16□□□□□ -0.14
PSMD6-202ENST00000394431 ATF5Q9Y2D1 282 aaPredicted RBP14.11□□□□□ -0.15
PSMD6-202ENST00000394431 ZBTB22O15209 634 aa14.06□□□□□ -0.16
PSMD6-202ENST00000394431 POTEHQ6S545 545 aa14.06□□□□□ -0.16
PSMD6-202ENST00000394431 RBM42Q9BTD8 480 aaKnown RBP13.94□□□□□ -0.18
PSMD6-202ENST00000394431 ZBTB12Q9Y330 459 aaPredicted RBP13.76□□□□□ -0.21
PSMD6-202ENST00000394431 ATXN8OSP0DMR3 200 aa13.71□□□□□ -0.21
PSMD6-202ENST00000394431 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
PSMD6-202ENST00000394431 CHRDL2Q6WN34 429 aa13.68□□□□□ -0.22
PSMD6-202ENST00000394431 AKT1S1Q96B36 256 aa13.64□□□□□ -0.23
PSMD6-202ENST00000394431 REM2Q8IYK8 340 aaPredicted RBP13.55□□□□□ -0.24
PSMD6-202ENST00000394431 FBLN2P98095 1184 aa13.48□□□□□ -0.25
PSMD6-202ENST00000394431 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
PSMD6-202ENST00000394431 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
PSMD6-202ENST00000394431 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
PSMD6-202ENST00000394431 SPDYE2BA6NHP3 402 aa13.38□□□□□ -0.27
PSMD6-202ENST00000394431 SPDYE6P0CI01 402 aa13.38□□□□□ -0.27
PSMD6-202ENST00000394431 SPDYE2Q495Y8 402 aa13.38□□□□□ -0.27
PSMD6-202ENST00000394431 PIP4P2Q8N4L2 257 aa13.38□□□□□ -0.27
PSMD6-202ENST00000394431 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
PSMD6-202ENST00000394431 ZNF692Q9BU19 519 aaPredicted RBP13.27□□□□□ -0.29
PSMD6-202ENST00000394431 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
PSMD6-202ENST00000394431 CLEC11AQ9Y240 323 aa13.22□□□□□ -0.29
PSMD6-202ENST00000394431 SSUH2Q9Y2M2 353 aa13.19□□□□□ -0.3
PSMD6-202ENST00000394431 HAX1O00165 279 aa13.17□□□□□ -0.3
PSMD6-202ENST00000394431 SP7Q8TDD2 431 aaPredicted RBP13.15□□□□□ -0.3
PSMD6-202ENST00000394431 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
PSMD6-202ENST00000394431 PRKAR2AP13861 404 aaKnown RBP13.09□□□□□ -0.31
PSMD6-202ENST00000394431 PABPN1Q86U42 306 aaKnown RBP eCLIP13.09□□□□□ -0.31
PSMD6-202ENST00000394431 EVX2Q03828 476 aa13.03□□□□□ -0.32
PSMD6-202ENST00000394431 NISCHQ9Y2I1 1504 aa13.01□□□□□ -0.33
PSMD6-202ENST00000394431 CHADLQ6NUI6 762 aa12.99□□□□□ -0.33
PSMD6-202ENST00000394431 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
PSMD6-202ENST00000394431 C19orf67A6NJJ6 358 aa12.85□□□□□ -0.35
PSMD6-202ENST00000394431 SPDYE4A6NLX3 237 aa12.78□□□□□ -0.36
PSMD6-202ENST00000394431 FARP1Q9Y4F1 1045 aaPredicted RBP12.72□□□□□ -0.37
PSMD6-202ENST00000394431 GABBR2O75899 941 aa12.69□□□□□ -0.38
PSMD6-202ENST00000394431 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
PSMD6-202ENST00000394431 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
PSMD6-202ENST00000394431 CREBZFQ9NS37 354 aa12.63□□□□□ -0.39
PSMD6-202ENST00000394431 ABCC9O60706 1549 aa12.5□□□□□ -0.41
PSMD6-202ENST00000394431 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
PSMD6-202ENST00000394431 POTEIP0CG38 1075 aa12.43□□□□□ -0.42
PSMD6-202ENST00000394431 ZNF579Q8NAF0 562 aaKnown RBP12.41□□□□□ -0.42
PSMD6-202ENST00000394431 MNX1P50219 401 aaPredicted RBP12.39□□□□□ -0.43
PSMD6-202ENST00000394431 PROM2Q8N271 834 aa12.39□□□□□ -0.43
PSMD6-202ENST00000394431 NPM1P06748 294 aaKnown RBP eCLIP12.37□□□□□ -0.43
PSMD6-202ENST00000394431 LHX8Q68G74 356 aa12.37□□□□□ -0.43
PSMD6-202ENST00000394431 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
PSMD6-202ENST00000394431 PAK3O75914 559 aaPredicted RBP12.35□□□□□ -0.43
PSMD6-202ENST00000394431 CLCN6P51797 869 aa12.35□□□□□ -0.43
PSMD6-202ENST00000394431 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
PSMD6-202ENST00000394431 PHF12Q96QT6 1004 aa12.34□□□□□ -0.43
PSMD6-202ENST00000394431 TSPYL2Q9H2G4 693 aaPredicted RBP12.23□□□□□ -0.45
PSMD6-202ENST00000394431 MIER1Q8N108 512 aa12.22□□□□□ -0.45
PSMD6-202ENST00000394431 FKBP8Q14318 412 aa12.17□□□□□ -0.46
PSMD6-202ENST00000394431 MS4A3Q96HJ5 214 aa12.15□□□□□ -0.46
PSMD6-202ENST00000394431 PLEKHG5O94827 1062 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms