RNA–Protein interactions for RNA: ENST00000554315.5

NUMB-209, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 1 (best)

Gene NUMB, Length 1,740 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-209ENST00000554315 NISCHQ9Y2I1 1504 aa33.1■■■□□ 2.89
NUMB-209ENST00000554315 CCDC180Q9P1Z9 1646 aa29.33■■■□□ 2.29
NUMB-209ENST00000554315 ABCC9O60706 1549 aa28.76■■■□□ 2.19
NUMB-209ENST00000554315 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
NUMB-209ENST00000554315 RB1CC1Q8TDY2 1594 aa27.69■■■□□ 2.02
NUMB-209ENST00000554315 NACADO15069 1562 aa27.68■■■□□ 2.02
NUMB-209ENST00000554315 MYO15BQ96JP2 1530 aa27.53■■■□□ 2
NUMB-209ENST00000554315 ZCCHC6Q5VYS8 1495 aaKnown RBP27.52■■■□□ 2
NUMB-209ENST00000554315 DCAF1Q9Y4B6 1507 aa27.4■■□□□ 1.98
NUMB-209ENST00000554315 PABPN1Q86U42 306 aaKnown RBP eCLIP26.96■■□□□ 1.91
NUMB-209ENST00000554315 UNC13AQ9UPW8 1703 aa26.86■■□□□ 1.89
NUMB-209ENST00000554315 SCRIBQ14160 1630 aa26.76■■□□□ 1.87
NUMB-209ENST00000554315 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
NUMB-209ENST00000554315 SHROOM4Q9ULL8 1493 aa26.59■■□□□ 1.85
NUMB-209ENST00000554315 DNAJC5BQ9UF47 199 aa26.42■■□□□ 1.82
NUMB-209ENST00000554315 EIF4G1Q04637 1599 aaKnown RBP26.09■■□□□ 1.77
NUMB-209ENST00000554315 CC2D2AQ9P2K1 1620 aa25.97■■□□□ 1.75
NUMB-209ENST00000554315 CECR2Q9BXF3 1484 aa25.87■■□□□ 1.73
NUMB-209ENST00000554315 BAZ1AQ9NRL2 1556 aaPredicted RBP25.66■■□□□ 1.7
NUMB-209ENST00000554315 SMARCA4P51532 1647 aa25.61■■□□□ 1.69
NUMB-209ENST00000554315 NCAPD3P42695 1498 aa25.58■■□□□ 1.68
NUMB-209ENST00000554315 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
NUMB-209ENST00000554315 SMARCA2P51531 1590 aa25.53■■□□□ 1.68
NUMB-209ENST00000554315 MROH2BQ7Z745 1585 aa25.47■■□□□ 1.67
NUMB-209ENST00000554315 PEG3Q9GZU2 1588 aa25.39■■□□□ 1.65
NUMB-209ENST00000554315 HMGXB3Q12766 1538 aa25.37■■□□□ 1.65
NUMB-209ENST00000554315 BAZ1BQ9UIG0 1483 aaKnown RBP25.35■■□□□ 1.65
NUMB-209ENST00000554315 RSF1Q96T23 1441 aaPredicted RBP25.25■■□□□ 1.63
NUMB-209ENST00000554315 WIZO95785 1651 aa25.15■■□□□ 1.62
NUMB-209ENST00000554315 TOP2AP11388 1531 aaKnown RBP24.93■■□□□ 1.58
NUMB-209ENST00000554315 CADPSQ9ULU8 1353 aa24.87■■□□□ 1.57
NUMB-209ENST00000554315 NESP48681 1621 aa24.85■■□□□ 1.57
NUMB-209ENST00000554315 ERCC6Q03468 1493 aa24.85■■□□□ 1.57
NUMB-209ENST00000554315 LAMC3Q9Y6N6 1575 aa24.84■■□□□ 1.57
NUMB-209ENST00000554315 PDS5BQ9NTI5 1447 aa24.79■■□□□ 1.56
NUMB-209ENST00000554315 SUPT5HO00267 1087 aaKnown RBP24.73■■□□□ 1.55
NUMB-209ENST00000554315 CCDC88BA6NC98 1476 aa24.69■■□□□ 1.54
NUMB-209ENST00000554315 CFTRP13569 1480 aa24.66■■□□□ 1.54
NUMB-209ENST00000554315 CUX2O14529 1486 aa24.57■■□□□ 1.52
NUMB-209ENST00000554315 FANCD2Q9BXW9 1451 aa24.52■■□□□ 1.51
NUMB-209ENST00000554315 CEP164Q9UPV0 1460 aa24.48■■□□□ 1.51
NUMB-209ENST00000554315 KIF21AQ7Z4S6 1674 aa24.47■■□□□ 1.51
NUMB-209ENST00000554315 MRC2Q9UBG0 1479 aa24.43■■□□□ 1.5
NUMB-209ENST00000554315 THOC2Q8NI27 1593 aaKnown RBP24.4■■□□□ 1.5
NUMB-209ENST00000554315 PRDM2Q13029 1718 aa24.3■■□□□ 1.48
NUMB-209ENST00000554315 WDR62O43379 1518 aa24.3■■□□□ 1.48
NUMB-209ENST00000554315 ABCC8Q09428 1581 aa24.22■■□□□ 1.47
NUMB-209ENST00000554315 URB2Q14146 1524 aaKnown RBP24.21■■□□□ 1.47
NUMB-209ENST00000554315 TOPBP1Q92547 1522 aa24.09■■□□□ 1.45
NUMB-209ENST00000554315 DNMBPQ6XZF7 1577 aa24.05■■□□□ 1.44
NUMB-209ENST00000554315 IFT140Q96RY7 1462 aa23.99■■□□□ 1.43
NUMB-209ENST00000554315 SOGA1O94964 1423 aa23.89■■□□□ 1.42
NUMB-209ENST00000554315 POLA1P09884 1462 aaPredicted RBP23.89■■□□□ 1.41
NUMB-209ENST00000554315 DNAJC5Q9H3Z4 198 aa23.89■■□□□ 1.41
NUMB-209ENST00000554315 CUX1P39880 1505 aa23.88■■□□□ 1.41
NUMB-209ENST00000554315 FGD5Q6ZNL6 1462 aa23.83■■□□□ 1.41
NUMB-209ENST00000554315 WRNQ14191 1432 aaPredicted RBP eCLIP23.83■■□□□ 1.4
NUMB-209ENST00000554315 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
NUMB-209ENST00000554315 RAD54L2Q9Y4B4 1467 aa23.79■■□□□ 1.4
NUMB-209ENST00000554315 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
NUMB-209ENST00000554315 AQRO60306 1485 aaKnown RBP eCLIP23.74■■□□□ 1.392e-8■■■■■ 27.9
NUMB-209ENST00000554315 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
NUMB-209ENST00000554315 OSCARQ8IYS5 282 aa23.7■■□□□ 1.39
NUMB-209ENST00000554315 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
NUMB-209ENST00000554315 WDR97A6NE52 1622 aa23.65■■□□□ 1.38
NUMB-209ENST00000554315 EIF4G3O43432 1585 aaKnown RBP23.65■■□□□ 1.38
NUMB-209ENST00000554315 BIVM-ERCC5R4GMW8 1640 aa23.64■■□□□ 1.38
NUMB-209ENST00000554315 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
NUMB-209ENST00000554315 ABCA10Q8WWZ4 1543 aa23.62■■□□□ 1.37
NUMB-209ENST00000554315 GRIN2BQ13224 1484 aa23.58■■□□□ 1.36
NUMB-209ENST00000554315 FBLN2P98095 1184 aa23.57■■□□□ 1.36
NUMB-209ENST00000554315 GAPVD1Q14C86 1478 aa23.57■■□□□ 1.36
NUMB-209ENST00000554315 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
NUMB-209ENST00000554315 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
NUMB-209ENST00000554315 SNAPC4Q5SXM2 1469 aa23.47■■□□□ 1.35
NUMB-209ENST00000554315 ABCA5Q8WWZ7 1642 aa23.43■■□□□ 1.34
NUMB-209ENST00000554315 TRIM41Q8WV44 630 aa23.42■■□□□ 1.34
NUMB-209ENST00000554315 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
NUMB-209ENST00000554315 KIF27Q86VH2 1401 aa23.38■■□□□ 1.33
NUMB-209ENST00000554315 PBRM1Q86U86 1689 aa23.35■■□□□ 1.33
NUMB-209ENST00000554315 ERICH3Q5RHP9 1530 aa23.35■■□□□ 1.33
NUMB-209ENST00000554315 FHAD1B1AJZ9 1412 aa23.33■■□□□ 1.32
NUMB-209ENST00000554315 CHD1O14646 1710 aa23.32■■□□□ 1.32
NUMB-209ENST00000554315 IGF1RP08069 1367 aa23.28■■□□□ 1.32
NUMB-209ENST00000554315 GRIN2AQ12879 1464 aa23.22■■□□□ 1.31
NUMB-209ENST00000554315 ADAMTS12P58397 1594 aa23.21■■□□□ 1.31
NUMB-209ENST00000554315 CARMIL1Q5VZK9 1371 aa23.15■■□□□ 1.3
NUMB-209ENST00000554315 NUP160Q12769 1436 aa23.13■■□□□ 1.29
NUMB-209ENST00000554315 CLASP1Q7Z460 1538 aa23.12■■□□□ 1.29
NUMB-209ENST00000554315 ARHGEF11O15085 1522 aa23.11■■□□□ 1.29
NUMB-209ENST00000554315 CUL7Q14999 1698 aa23.09■■□□□ 1.29
NUMB-209ENST00000554315 CHIC1Q5VXU3 224 aa23.08■■□□□ 1.28
NUMB-209ENST00000554315 RIMBP3CA6NJZ7 1639 aa23.07■■□□□ 1.28
NUMB-209ENST00000554315 RIMBP3BA6NNM3 1639 aa23.07■■□□□ 1.28
NUMB-209ENST00000554315 RIMBP3Q9UFD9 1639 aa23.07■■□□□ 1.28
NUMB-209ENST00000554315 CYB5RLQ6IPT4 315 aa23.06■■□□□ 1.28
NUMB-209ENST00000554315 RUSC2Q8N2Y8 1516 aa23.05■■□□□ 1.28
NUMB-209ENST00000554315 JPH4Q96JJ6 628 aa23.04■■□□□ 1.28
NUMB-209ENST00000554315 CEP170Q5SW79 1584 aa23.03■■□□□ 1.28
NUMB-209ENST00000554315 CSRNP3Q8WYN3 585 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms