Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 HNRNPC-223ENST00000556142 1599 ntTSL 5 BASIC10.07□□□□□ -0.89e-29■■■■□ 21.1
XRN2Q9H0D6 HNRNPC-226ENST00000556628 1156 ntTSL 1 (best) BASIC9.22□□□□□ -0.939e-29■■■■□ 21.1
XRN2Q9H0D6 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.6□□□□□ -1.039e-29■■■■□ 21.1
XRN2Q9H0D6 HNRNPC-201ENST00000336053 3301 ntTSL 2 BASIC8.13□□□□□ -1.119e-29■■■■□ 21.1
XRN2Q9H0D6 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.822e-6■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.886e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.58■□□□□ 0.736e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.13■□□□□ 0.496e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-212ENST00000538682 1368 ntTSL 1 (best)17.96■□□□□ 0.476e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.79■□□□□ 0.286e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.57■□□□□ 0.246e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.48■□□□□ 0.236e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-220ENST00000542922 2174 ntTSL 213.75□□□□□ -0.216e-21■■■■□ 21.1
XRN2Q9H0D6 SLC3A2-215ENST00000539891 1300 ntTSL 1 (best)12.77□□□□□ -0.376e-21■■■■□ 21.1
XRN2Q9H0D6 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.766e-7■■■■□ 21.1
XRN2Q9H0D6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.94■□□□□ 0.463e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-203ENST00000428632 2296 ntTSL 216.37■□□□□ 0.213e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.153e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-219ENST00000552077 3293 ntTSL 215.26■□□□□ 0.033e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.62□□□□□ -0.073e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-218ENST00000551127 2975 ntTSL 213.26□□□□□ -0.293e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-210ENST00000547955 609 ntTSL 512.57□□□□□ -0.43e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-204ENST00000541517 5173 ntTSL 5 BASIC12.17□□□□□ -0.463e-10■■■■□ 21.1
XRN2Q9H0D6 TPCN1-202ENST00000392569 2558 ntTSL 2 BASIC10.86□□□□□ -0.673e-10■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-229ENST00000640440 871 ntTSL 317.24■□□□□ 0.352e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-217ENST00000638952 5678 ntTSL 517■□□□□ 0.312e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.212e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-209ENST00000476241 4844 ntTSL 516.21■□□□□ 0.192e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-228ENST00000640306 2917 ntTSL 516.14■□□□□ 0.172e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-214ENST00000638475 2698 ntTSL 516.13■□□□□ 0.172e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.042e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.062e-15■■■■□ 21.1
XRN2Q9H0D6 HNRNPU-224ENST00000640056 2045 ntTSL 510.6□□□□□ -0.712e-15■■■■□ 21.1
XRN2Q9H0D6 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC14.29□□□□□ -0.126e-6■■■■□ 21
XRN2Q9H0D6 GMPS-203ENST00000496455 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.456e-6■■■■□ 21
XRN2Q9H0D6 CERS2-203ENST00000361419 997 ntTSL 236.34■■■■□ 3.416e-10■■■■□ 21
XRN2Q9H0D6 CERS2-206ENST00000421609 738 ntTSL 330.82■■■□□ 2.526e-10■■■■□ 21
XRN2Q9H0D6 TBCEL-204ENST00000528512 553 ntTSL 430.81■■■□□ 2.525e-6■■■■□ 21
XRN2Q9H0D6 CERS2-202ENST00000345896 2170 ntTSL 229.67■■■□□ 2.346e-10■■■■□ 21
XRN2Q9H0D6 SPON2-204ENST00000502483 571 ntTSL 429.29■■■□□ 2.286e-6■■■■□ 21
XRN2Q9H0D6 SPON2-207ENST00000504871 581 ntTSL 428.05■■■□□ 2.086e-6■■■■□ 21
XRN2Q9H0D6 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC27.73■■■□□ 2.033e-22■■■■□ 21
XRN2Q9H0D6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.996e-10■■■■□ 21
XRN2Q9H0D6 SPON2-220ENST00000515004 571 ntTSL 426.49■■□□□ 1.836e-6■■■■□ 21
XRN2Q9H0D6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.816e-10■■■■□ 21
XRN2Q9H0D6 TBCEL-210ENST00000533712 947 ntTSL 524.88■■□□□ 1.575e-6■■■■□ 21
XRN2Q9H0D6 CERK-202ENST00000443629 1760 ntTSL 1 (best)24.71■■□□□ 1.556e-9■■■■□ 21
XRN2Q9H0D6 ZFAND5-203ENST00000376956 690 ntTSL 524.35■■□□□ 1.493e-22■■■■□ 21
XRN2Q9H0D6 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.82■■□□□ 1.41e-9■■■■□ 21
XRN2Q9H0D6 SPON2-212ENST00000509233 549 ntTSL 423.2■■□□□ 1.36e-6■■■■□ 21
XRN2Q9H0D6 MARS-202ENST00000447721 1328 ntTSL 222.34■■□□□ 1.173e-6■■■■□ 21
XRN2Q9H0D6 TBCEL-207ENST00000531148 2593 ntTSL 221.68■■□□□ 1.065e-6■■■■□ 21
XRN2Q9H0D6 SPON2-215ENST00000511672 557 ntTSL 420.14■□□□□ 0.816e-6■■■■□ 21
XRN2Q9H0D6 ZFAND5-207ENST00000487330 631 ntTSL 220.1■□□□□ 0.813e-22■■■■□ 21
XRN2Q9H0D6 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.621e-9■■■■□ 21
XRN2Q9H0D6 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.67■□□□□ 0.585e-6■■■■□ 21
XRN2Q9H0D6 SPON2-216ENST00000511679 556 ntTSL 518.56■□□□□ 0.566e-6■■■■□ 21
XRN2Q9H0D6 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.465e-6■■■■□ 21
XRN2Q9H0D6 PRRC2A-208ENST00000469577 918 ntTSL 517.77■□□□□ 0.442e-7■■■■□ 21
XRN2Q9H0D6 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.411e-9■■■■□ 21
XRN2Q9H0D6 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.375e-6■■■■□ 21
XRN2Q9H0D6 SCARB1-205ENST00000538291 5527 ntTSL 517.05■□□□□ 0.321e-9■■■■□ 21
XRN2Q9H0D6 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.156e-9■■■■□ 21
XRN2Q9H0D6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.143e-22■■■■□ 21
XRN2Q9H0D6 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.49■□□□□ 0.071e-9■■■■□ 21
XRN2Q9H0D6 SPON2-210ENST00000506266 462 ntTSL 415.31■□□□□ 0.046e-6■■■■□ 21
XRN2Q9H0D6 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.043e-22■■■■□ 21
XRN2Q9H0D6 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.64□□□□□ -0.073e-6■■■■□ 21
XRN2Q9H0D6 TBCEL-201ENST00000284259 3923 ntTSL 1 (best)14.31□□□□□ -0.125e-6■■■■□ 21
XRN2Q9H0D6 ABCC6-202ENST00000456970 4137 ntTSL 214.06□□□□□ -0.163e-6■■■■□ 21
XRN2Q9H0D6 CERK-203ENST00000460254 434 ntTSL 214.01□□□□□ -0.176e-9■■■■□ 21
XRN2Q9H0D6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.195e-6■■■■□ 21
XRN2Q9H0D6 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.25e-6■■■■□ 21
XRN2Q9H0D6 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.23e-6■■■■□ 21
XRN2Q9H0D6 TBCEL-202ENST00000422003 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.645e-6■■■■□ 21
XRN2Q9H0D6 BCL9L-205ENST00000532899 611 ntTSL 519.72■□□□□ 0.758e-8■■■■□ 21
XRN2Q9H0D6 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.06■□□□□ 08e-8■■■■□ 21
XRN2Q9H0D6 ROCK2-206ENST00000462366 563 ntTSL 35.81□□□□□ -1.485e-11■■■■□ 21
XRN2Q9H0D6 CUX1-216ENST00000558469 588 ntTSL 410.78□□□□□ -0.681e-6■■■■□ 21
XRN2Q9H0D6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.014e-6■■■■□ 21
XRN2Q9H0D6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.068e-7■■■■□ 20.9
XRN2Q9H0D6 SESN2-201ENST00000253063 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.377e-7■■■■□ 20.9
XRN2Q9H0D6 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.23■□□□□ 0.992e-6■■■■□ 20.9
XRN2Q9H0D6 RUVBL2-201ENST00000221413 1478 ntTSL 1 (best)20.99■□□□□ 0.952e-6■■■■□ 20.9
XRN2Q9H0D6 RUVBL2-208ENST00000596247 1563 ntTSL 220.48■□□□□ 0.872e-6■■■■□ 20.9
XRN2Q9H0D6 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.792e-6■■■■□ 20.9
XRN2Q9H0D6 RUVBL2-204ENST00000594338 1853 ntTSL 519.77■□□□□ 0.762e-6■■■■□ 20.9
XRN2Q9H0D6 RUVBL2-212ENST00000627972 1065 ntTSL 5 BASIC12.79□□□□□ -0.362e-6■■■■□ 20.9
XRN2Q9H0D6 ITGB1-215ENST00000488494 540 ntTSL 421.11■□□□□ 0.971e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-211ENST00000475184 552 ntTSL 419.82■□□□□ 0.761e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-210ENST00000474568 788 ntTSL 518.87■□□□□ 0.611e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-204ENST00000417122 569 ntTSL 418.56■□□□□ 0.561e-13■■■■□ 20.9
XRN2Q9H0D6 TRIM24-206ENST00000497516 1515 ntTSL 516.33■□□□□ 0.21e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-218ENST00000528877 546 ntTSL 48.41□□□□□ -1.061e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.11e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-203ENST00000414670 500 ntTSL 36.73□□□□□ -1.331e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-219ENST00000534049 562 ntTSL 44.12□□□□□ -1.751e-13■■■■□ 20.9
XRN2Q9H0D6 ITGB1-213ENST00000484088 580 ntTSL 42.46□□□□□ -2.021e-13■■■■□ 20.9
XRN2Q9H0D6 POLR3E-204ENST00000561494 575 ntTSL 325.14■■□□□ 1.622e-6■■■■□ 20.8
XRN2Q9H0D6 POLR3E-212ENST00000564883 560 ntTSL 422.51■■□□□ 1.192e-6■■■■□ 20.8
Retrieved 100 of 21,068 protein–RNA pairs in 86 ms