RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 AEBP2Q6ZN18 517 aaPredicted RBP14.31□□□□□ -0.12
ITGB1-213ENST00000484088 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
ITGB1-213ENST00000484088 PHF23Q9BUL5 403 aaPredicted RBP12.08□□□□□ -0.48
ITGB1-213ENST00000484088 SENP3Q9H4L4 574 aaPredicted RBP11.89□□□□□ -0.51
ITGB1-213ENST00000484088 FOXD1Q16676 465 aa11.24□□□□□ -0.61
ITGB1-213ENST00000484088 PLPPR3Q6T4P5 718 aa10.81□□□□□ -0.68
ITGB1-213ENST00000484088 PPP6R1Q9UPN7 881 aa10.74□□□□□ -0.69
ITGB1-213ENST00000484088 ADRA2BP18089 450 aa10.62□□□□□ -0.71
ITGB1-213ENST00000484088 PIAS4Q8N2W9 510 aaPredicted RBP10.4□□□□□ -0.74
ITGB1-213ENST00000484088 MSH5O43196 834 aa10.24□□□□□ -0.77
ITGB1-213ENST00000484088 POTEDQ86YR6 584 aa9.89□□□□□ -0.83
ITGB1-213ENST00000484088 MAPK8IP2Q13387 824 aaPredicted RBP9.75□□□□□ -0.85
ITGB1-213ENST00000484088 PPP4R3CPQ6ZMV5 832 aa9.58□□□□□ -0.88
ITGB1-213ENST00000484088 DMRT2Q9Y5R5 561 aa9.55□□□□□ -0.88
ITGB1-213ENST00000484088 SCAF1Q9H7N4 1312 aaKnown RBP9.43□□□□□ -0.9
ITGB1-213ENST00000484088 HOXD11P31277 338 aaPredicted RBP9.3□□□□□ -0.92
ITGB1-213ENST00000484088 CNKSR2Q8WXI2 1034 aa9.3□□□□□ -0.92
ITGB1-213ENST00000484088 RNF216Q9NWF9 866 aaPredicted RBP9.2□□□□□ -0.94
ITGB1-213ENST00000484088 KCNA4P22459 653 aa9.19□□□□□ -0.94
ITGB1-213ENST00000484088 NPM3O75607 178 aaKnown RBP9.18□□□□□ -0.94
ITGB1-213ENST00000484088 NCBP3Q53F19 620 aaKnown RBP9.07□□□□□ -0.96
ITGB1-213ENST00000484088 DCAF8L1A6NGE4 600 aa8.97□□□□□ -0.97
ITGB1-213ENST00000484088 DNAJC5BQ9UF47 199 aa8.97□□□□□ -0.97
ITGB1-213ENST00000484088 RNF39Q9H2S5 420 aa8.9□□□□□ -0.98
ITGB1-213ENST00000484088 SLC4A2P04920 1241 aa8.81□□□□□ -1
ITGB1-213ENST00000484088 U3KPZ7 1027 aaPredicted RBP8.71□□□□□ -1.02
ITGB1-213ENST00000484088 CACNB1Q02641 598 aaPredicted RBP8.68□□□□□ -1.02
ITGB1-213ENST00000484088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.68□□□□□ -1.021e-12■□□□□ 10
ITGB1-213ENST00000484088 C1QBPQ07021 282 aaKnown RBP8.66□□□□□ -1.02
ITGB1-213ENST00000484088 ZBTB22O15209 634 aa8.57□□□□□ -1.04
ITGB1-213ENST00000484088 SLC4A1APQ9BWU0 796 aaKnown RBP8.57□□□□□ -1.04
ITGB1-213ENST00000484088 SPINK5Q9NQ38 1064 aaPredicted RBP8.54□□□□□ -1.04
ITGB1-213ENST00000484088 DSG3P32926 999 aa8.4□□□□□ -1.06
ITGB1-213ENST00000484088 FOXD4L1Q9NU39 408 aa8.39□□□□□ -1.07
ITGB1-213ENST00000484088 ATF5Q9Y2D1 282 aaPredicted RBP8.39□□□□□ -1.07
ITGB1-213ENST00000484088 MYCNP04198 464 aaPredicted RBP8.36□□□□□ -1.07
ITGB1-213ENST00000484088 CAPN15O75808 1086 aa8.33□□□□□ -1.08
ITGB1-213ENST00000484088 TRHP20396 242 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-213ENST00000484088 SAMD1Q6SPF0 538 aaPredicted RBP8.27□□□□□ -1.09
ITGB1-213ENST00000484088 ABCB7O75027 752 aa8.25□□□□□ -1.09
ITGB1-213ENST00000484088 CSRNP3Q8WYN3 585 aa8.25□□□□□ -1.09
ITGB1-213ENST00000484088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.24□□□□□ -1.09
ITGB1-213ENST00000484088 HNRNPUL2Q1KMD3 747 aaKnown RBP8.24□□□□□ -1.09
ITGB1-213ENST00000484088 ZNF219Q9P2Y4 722 aaPredicted RBP8.2□□□□□ -1.1
ITGB1-213ENST00000484088 POLA2Q14181 598 aa8.14□□□□□ -1.11
ITGB1-213ENST00000484088 APLP2Q06481 763 aa8.12□□□□□ -1.11
ITGB1-213ENST00000484088 ATXN8OSP0DMR3 200 aa8.09□□□□□ -1.11
ITGB1-213ENST00000484088 EHMT2Q96KQ7 1210 aa8.09□□□□□ -1.11
ITGB1-213ENST00000484088 MKRN4PQ13434 485 aaPredicted RBP8□□□□□ -1.13
ITGB1-213ENST00000484088 OSCARQ8IYS5 282 aa7.9□□□□□ -1.14
ITGB1-213ENST00000484088 ZBTB12Q9Y330 459 aaPredicted RBP7.81□□□□□ -1.16
ITGB1-213ENST00000484088 RBM42Q9BTD8 480 aaKnown RBP7.79□□□□□ -1.16
ITGB1-213ENST00000484088 REM2Q8IYK8 340 aaPredicted RBP7.74□□□□□ -1.17
ITGB1-213ENST00000484088 AKT1S1Q96B36 256 aa7.74□□□□□ -1.17
ITGB1-213ENST00000484088 SSUH2Q9Y2M2 353 aa7.73□□□□□ -1.17
ITGB1-213ENST00000484088 POTEHQ6S545 545 aa7.71□□□□□ -1.18
ITGB1-213ENST00000484088 FBLN2P98095 1184 aa7.7□□□□□ -1.18
ITGB1-213ENST00000484088 SPDYE2BA6NHP3 402 aa7.69□□□□□ -1.18
ITGB1-213ENST00000484088 SPDYE6P0CI01 402 aa7.69□□□□□ -1.18
ITGB1-213ENST00000484088 SPDYE2Q495Y8 402 aa7.69□□□□□ -1.18
ITGB1-213ENST00000484088 PITPNM1O00562 1244 aa7.68□□□□□ -1.18
ITGB1-213ENST00000484088 CHRDL2Q6WN34 429 aa7.68□□□□□ -1.18
ITGB1-213ENST00000484088 ZNF692Q9BU19 519 aaPredicted RBP7.61□□□□□ -1.19
ITGB1-213ENST00000484088 FXR2P51116 673 aaKnown RBP eCLIP7.6□□□□□ -1.192e-7■■□□□ 11.5
ITGB1-213ENST00000484088 PIP4P2Q8N4L2 257 aa7.6□□□□□ -1.19
ITGB1-213ENST00000484088 PABPN1Q86U42 306 aaKnown RBP eCLIP7.56□□□□□ -1.2
ITGB1-213ENST00000484088 PROM2Q8N271 834 aa7.52□□□□□ -1.21
ITGB1-213ENST00000484088 SPDYE4A6NLX3 237 aa7.51□□□□□ -1.21
ITGB1-213ENST00000484088 EVX2Q03828 476 aa7.49□□□□□ -1.21
ITGB1-213ENST00000484088 SPDYE1Q8NFV5 336 aaPredicted RBP7.48□□□□□ -1.21
ITGB1-213ENST00000484088 CLEC11AQ9Y240 323 aa7.45□□□□□ -1.22
ITGB1-213ENST00000484088 CHADLQ6NUI6 762 aa7.43□□□□□ -1.22
ITGB1-213ENST00000484088 PRKAR2AP13861 404 aaKnown RBP7.41□□□□□ -1.22
ITGB1-213ENST00000484088 CREBZFQ9NS37 354 aa7.39□□□□□ -1.23
ITGB1-213ENST00000484088 MNX1P50219 401 aaPredicted RBP7.37□□□□□ -1.23
ITGB1-213ENST00000484088 PRR29P0C7W0 189 aa7.35□□□□□ -1.23
ITGB1-213ENST00000484088 C19orf67A6NJJ6 358 aa7.34□□□□□ -1.23
ITGB1-213ENST00000484088 FKBP8Q14318 412 aa7.32□□□□□ -1.24
ITGB1-213ENST00000484088 SP7Q8TDD2 431 aaPredicted RBP7.3□□□□□ -1.24
ITGB1-213ENST00000484088 FARP1Q9Y4F1 1045 aaPredicted RBP7.29□□□□□ -1.24
ITGB1-213ENST00000484088 HAX1O00165 279 aa7.28□□□□□ -1.24
ITGB1-213ENST00000484088 STAG3Q9UJ98 1225 aa7.24□□□□□ -1.25
ITGB1-213ENST00000484088 GABBR2O75899 941 aa7.17□□□□□ -1.26
ITGB1-213ENST00000484088 POTEIP0CG38 1075 aa7.16□□□□□ -1.26
ITGB1-213ENST00000484088 CD44P16070 742 aaKnown RBP7.16□□□□□ -1.26
ITGB1-213ENST00000484088 ZNF579Q8NAF0 562 aaKnown RBP7.12□□□□□ -1.27
ITGB1-213ENST00000484088 RASEFQ8IZ41 740 aa7.11□□□□□ -1.27
ITGB1-213ENST00000484088 NUBP1P53384 320 aa7.1□□□□□ -1.27
ITGB1-213ENST00000484088 PHF12Q96QT6 1004 aa7.1□□□□□ -1.27
ITGB1-213ENST00000484088 ZRANB1Q9UGI0 708 aa7.09□□□□□ -1.27
ITGB1-213ENST00000484088 GALR2O43603 387 aaPredicted RBP7.08□□□□□ -1.28
ITGB1-213ENST00000484088 CCDC61Q9Y6R9 512 aa7.08□□□□□ -1.28
ITGB1-213ENST00000484088 MIER1Q8N108 512 aa7.07□□□□□ -1.28
ITGB1-213ENST00000484088 VASPP50552 380 aaPredicted RBP7.04□□□□□ -1.28
ITGB1-213ENST00000484088 IFNLR1Q8IU57 520 aaPredicted RBP7.03□□□□□ -1.28
ITGB1-213ENST00000484088 TRPC6Q9Y210 931 aa7.02□□□□□ -1.29
ITGB1-213ENST00000484088 NPM1P06748 294 aaKnown RBP eCLIP7.01□□□□□ -1.29
ITGB1-213ENST00000484088 PELP1Q8IZL8 1130 aaKnown RBP7.01□□□□□ -1.29
ITGB1-213ENST00000484088 TSPYL2Q9H2G4 693 aaPredicted RBP7.01□□□□□ -1.29
ITGB1-213ENST00000484088 KIF12Q96FN5 646 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms