Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
ATP6V0A4Q9HBG4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.61■■■□□ 2.17
ATP6V0A4Q9HBG4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L13-201ENST00000554103 1267 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L15-201ENST00000611059 1267 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L23-201ENST00000615195 1269 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L24-201ENST00000617576 1269 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L22-201ENST00000618238 1269 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L20-201ENST00000619712 1269 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L21-201ENST00000622058 1269 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L10-201ENST00000622460 1267 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 DUX4L25-201ENST00000624915 1269 ntBASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
ATP6V0A4Q9HBG4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.59■■■□□ 2.17
ATP6V0A4Q9HBG4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.59■■■□□ 2.17
ATP6V0A4Q9HBG4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
ATP6V0A4Q9HBG4 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.59■■■□□ 2.17
ATP6V0A4Q9HBG4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
ATP6V0A4Q9HBG4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.58■■■□□ 2.17
ATP6V0A4Q9HBG4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ATP6V0A4Q9HBG4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.58■■■□□ 2.17
ATP6V0A4Q9HBG4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ATP6V0A4Q9HBG4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.57■■■□□ 2.16
ATP6V0A4Q9HBG4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.57■■■□□ 2.16
ATP6V0A4Q9HBG4 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.57■■■□□ 2.16
ATP6V0A4Q9HBG4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
ATP6V0A4Q9HBG4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.56■■■□□ 2.16
ATP6V0A4Q9HBG4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.56■■■□□ 2.16
ATP6V0A4Q9HBG4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
ATP6V0A4Q9HBG4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
ATP6V0A4Q9HBG4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ATP6V0A4Q9HBG4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
ATP6V0A4Q9HBG4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
ATP6V0A4Q9HBG4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ATP6V0A4Q9HBG4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
ATP6V0A4Q9HBG4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
ATP6V0A4Q9HBG4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.52■■■□□ 2.16
ATP6V0A4Q9HBG4 AP004833.2-201ENST00000532228 1454 ntBASIC28.52■■■□□ 2.16
ATP6V0A4Q9HBG4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.52■■■□□ 2.16
ATP6V0A4Q9HBG4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ATP6V0A4Q9HBG4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.51■■■□□ 2.16
ATP6V0A4Q9HBG4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ATP6V0A4Q9HBG4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
ATP6V0A4Q9HBG4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ATP6V0A4Q9HBG4 AL139393.2-201ENST00000608721 2025 ntBASIC28.49■■■□□ 2.15
ATP6V0A4Q9HBG4 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.49■■■□□ 2.15
ATP6V0A4Q9HBG4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC28.49■■■□□ 2.15
ATP6V0A4Q9HBG4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.49■■■□□ 2.15
ATP6V0A4Q9HBG4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.48■■■□□ 2.15
ATP6V0A4Q9HBG4 HSD17B1P1-201ENST00000590052 955 ntBASIC28.48■■■□□ 2.15
ATP6V0A4Q9HBG4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
ATP6V0A4Q9HBG4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.47■■■□□ 2.15
ATP6V0A4Q9HBG4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.46■■■□□ 2.15
ATP6V0A4Q9HBG4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.46■■■□□ 2.15
ATP6V0A4Q9HBG4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.45■■■□□ 2.14
ATP6V0A4Q9HBG4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
ATP6V0A4Q9HBG4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.45■■■□□ 2.14
ATP6V0A4Q9HBG4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
ATP6V0A4Q9HBG4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
ATP6V0A4Q9HBG4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
ATP6V0A4Q9HBG4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.42■■■□□ 2.14
ATP6V0A4Q9HBG4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
ATP6V0A4Q9HBG4 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.41■■■□□ 2.14
ATP6V0A4Q9HBG4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
ATP6V0A4Q9HBG4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.4■■■□□ 2.14
ATP6V0A4Q9HBG4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.39■■■□□ 2.14
ATP6V0A4Q9HBG4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.39■■■□□ 2.14
ATP6V0A4Q9HBG4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.39■■■□□ 2.14
ATP6V0A4Q9HBG4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
ATP6V0A4Q9HBG4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.39■■■□□ 2.13
ATP6V0A4Q9HBG4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.13
ATP6V0A4Q9HBG4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.38■■■□□ 2.13
ATP6V0A4Q9HBG4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
ATP6V0A4Q9HBG4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.38■■■□□ 2.13
ATP6V0A4Q9HBG4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.38■■■□□ 2.13
ATP6V0A4Q9HBG4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
ATP6V0A4Q9HBG4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
ATP6V0A4Q9HBG4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
ATP6V0A4Q9HBG4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC28.37■■■□□ 2.13
ATP6V0A4Q9HBG4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
ATP6V0A4Q9HBG4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC28.36■■■□□ 2.13
ATP6V0A4Q9HBG4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.36■■■□□ 2.13
ATP6V0A4Q9HBG4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.36■■■□□ 2.13
ATP6V0A4Q9HBG4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.35■■■□□ 2.13
ATP6V0A4Q9HBG4 AC110285.7-201ENST00000624417 1536 ntBASIC28.35■■■□□ 2.13
ATP6V0A4Q9HBG4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
ATP6V0A4Q9HBG4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
ATP6V0A4Q9HBG4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
ATP6V0A4Q9HBG4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.34■■■□□ 2.13
ATP6V0A4Q9HBG4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
ATP6V0A4Q9HBG4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.33■■■□□ 2.13
ATP6V0A4Q9HBG4 AC100797.4-201ENST00000631653 1827 ntBASIC28.33■■■□□ 2.13
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms