Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
MINDY3Q9H8M7 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC28.31■■■□□ 2.12
MINDY3Q9H8M7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MINDY3Q9H8M7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.3■■■□□ 2.12
MINDY3Q9H8M7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.29■■■□□ 2.12
MINDY3Q9H8M7 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC28.29■■■□□ 2.12
MINDY3Q9H8M7 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
MINDY3Q9H8M7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
MINDY3Q9H8M7 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
MINDY3Q9H8M7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.27■■■□□ 2.12
MINDY3Q9H8M7 ABCB10P1-201ENST00000614297 2181 ntBASIC28.26■■■□□ 2.11
MINDY3Q9H8M7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC28.24■■■□□ 2.11
MINDY3Q9H8M7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
MINDY3Q9H8M7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC28.22■■■□□ 2.11
MINDY3Q9H8M7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC28.22■■■□□ 2.11
MINDY3Q9H8M7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
MINDY3Q9H8M7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.21■■■□□ 2.11
MINDY3Q9H8M7 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
MINDY3Q9H8M7 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.21■■■□□ 2.11
MINDY3Q9H8M7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
MINDY3Q9H8M7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
MINDY3Q9H8M7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
MINDY3Q9H8M7 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.2■■■□□ 2.1
MINDY3Q9H8M7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.2■■■□□ 2.1
MINDY3Q9H8M7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
MINDY3Q9H8M7 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.19■■■□□ 2.1
MINDY3Q9H8M7 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
MINDY3Q9H8M7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
MINDY3Q9H8M7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
MINDY3Q9H8M7 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
MINDY3Q9H8M7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MINDY3Q9H8M7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
MINDY3Q9H8M7 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
MINDY3Q9H8M7 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC28.17■■■□□ 2.1
MINDY3Q9H8M7 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
MINDY3Q9H8M7 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
MINDY3Q9H8M7 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC28.16■■■□□ 2.1
MINDY3Q9H8M7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
MINDY3Q9H8M7 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC28.16■■■□□ 2.1
MINDY3Q9H8M7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
MINDY3Q9H8M7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC28.15■■■□□ 2.1
MINDY3Q9H8M7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
MINDY3Q9H8M7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
MINDY3Q9H8M7 AC110285.7-201ENST00000624417 1536 ntBASIC28.14■■■□□ 2.1
MINDY3Q9H8M7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.14■■■□□ 2.1
MINDY3Q9H8M7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.1
MINDY3Q9H8M7 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
MINDY3Q9H8M7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
MINDY3Q9H8M7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC28.12■■■□□ 2.09
MINDY3Q9H8M7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
MINDY3Q9H8M7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
MINDY3Q9H8M7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.1■■■□□ 2.09
MINDY3Q9H8M7 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC28.1■■■□□ 2.09
MINDY3Q9H8M7 AL139393.2-201ENST00000608721 2025 ntBASIC28.1■■■□□ 2.09
MINDY3Q9H8M7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
MINDY3Q9H8M7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
MINDY3Q9H8M7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
MINDY3Q9H8M7 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
MINDY3Q9H8M7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 AP004833.2-201ENST00000532228 1454 ntBASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.08■■■□□ 2.09
MINDY3Q9H8M7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.08
MINDY3Q9H8M7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
MINDY3Q9H8M7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
MINDY3Q9H8M7 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.07■■■□□ 2.08
MINDY3Q9H8M7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 AC100797.4-201ENST00000631653 1827 ntBASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.06■■■□□ 2.08
MINDY3Q9H8M7 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.05■■■□□ 2.08
MINDY3Q9H8M7 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.05■■■□□ 2.08
MINDY3Q9H8M7 PEX7-203ENST00000541292 945 ntTSL 5 BASIC28.05■■■□□ 2.08
MINDY3Q9H8M7 HSD17B1P1-201ENST00000590052 955 ntBASIC28.05■■■□□ 2.08
MINDY3Q9H8M7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
MINDY3Q9H8M7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms