Protein–RNA interactions for Protein: Q9H8M7

MINDY3, Ubiquitin carboxyl-terminal hydrolase MINDY-3, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3Q9H8M7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.91■■■■□ 3.66
MINDY3Q9H8M7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.95■■■■□ 3.51
MINDY3Q9H8M7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.77■■■■□ 3.48
MINDY3Q9H8M7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC36.76■■■■□ 3.48
MINDY3Q9H8M7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.7■■■■□ 3.47
MINDY3Q9H8M7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.67■■■■□ 3.46
MINDY3Q9H8M7 AL356512.1-201ENST00000607453 1739 ntBASIC36.62■■■■□ 3.45
MINDY3Q9H8M7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.14■■■■□ 3.38
MINDY3Q9H8M7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.72■■■■□ 3.31
MINDY3Q9H8M7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.66■■■■□ 3.3
MINDY3Q9H8M7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.49■■■■□ 3.27
MINDY3Q9H8M7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.36■■■■□ 3.25
MINDY3Q9H8M7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.33■■■■□ 3.25
MINDY3Q9H8M7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.32■■■■□ 3.24
MINDY3Q9H8M7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.19■■■■□ 3.22
MINDY3Q9H8M7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.18■■■■□ 3.22
MINDY3Q9H8M7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.05■■■■□ 3.2
MINDY3Q9H8M7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
MINDY3Q9H8M7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC35.04■■■■□ 3.2
MINDY3Q9H8M7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC34.82■■■■□ 3.16
MINDY3Q9H8M7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.75■■■■□ 3.15
MINDY3Q9H8M7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.53■■■■□ 3.12
MINDY3Q9H8M7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.52■■■■□ 3.12
MINDY3Q9H8M7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
MINDY3Q9H8M7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.07
MINDY3Q9H8M7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.2■■■■□ 3.07
MINDY3Q9H8M7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC34.2■■■■□ 3.06
MINDY3Q9H8M7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.14■■■■□ 3.06
MINDY3Q9H8M7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.09■■■■□ 3.05
MINDY3Q9H8M7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC34.05■■■■□ 3.04
MINDY3Q9H8M7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.05■■■■□ 3.04
MINDY3Q9H8M7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34■■■■□ 3.03
MINDY3Q9H8M7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.83■■■■□ 3.01
MINDY3Q9H8M7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.83■■■■□ 3.01
MINDY3Q9H8M7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
MINDY3Q9H8M7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.8■■■■□ 3
MINDY3Q9H8M7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.69■■■□□ 2.98
MINDY3Q9H8M7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC33.56■■■□□ 2.96
MINDY3Q9H8M7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC33.54■■■□□ 2.96
MINDY3Q9H8M7 AC015813.7-201ENST00000623294 581 ntBASIC33.54■■■□□ 2.96
MINDY3Q9H8M7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.48■■■□□ 2.95
MINDY3Q9H8M7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
MINDY3Q9H8M7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
MINDY3Q9H8M7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.37■■■□□ 2.93
MINDY3Q9H8M7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
MINDY3Q9H8M7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.33■■■□□ 2.93
MINDY3Q9H8M7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC33.25■■■□□ 2.91
MINDY3Q9H8M7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.25■■■□□ 2.91
MINDY3Q9H8M7 AC006077.2-201ENST00000623591 457 ntBASIC33.22■■■□□ 2.91
MINDY3Q9H8M7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.19■■■□□ 2.9
MINDY3Q9H8M7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.19■■■□□ 2.9
MINDY3Q9H8M7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.15■■■□□ 2.9
MINDY3Q9H8M7 ZNRF2P1-201ENST00000441407 443 ntBASIC33.13■■■□□ 2.89
MINDY3Q9H8M7 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC33.09■■■□□ 2.89
MINDY3Q9H8M7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC33.06■■■□□ 2.88
MINDY3Q9H8M7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.02■■■□□ 2.88
MINDY3Q9H8M7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.98■■■□□ 2.87
MINDY3Q9H8M7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
MINDY3Q9H8M7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.96■■■□□ 2.87
MINDY3Q9H8M7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
MINDY3Q9H8M7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
MINDY3Q9H8M7 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
MINDY3Q9H8M7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
MINDY3Q9H8M7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.7■■■□□ 2.82
MINDY3Q9H8M7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
MINDY3Q9H8M7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
MINDY3Q9H8M7 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
MINDY3Q9H8M7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
MINDY3Q9H8M7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
MINDY3Q9H8M7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.49■■■□□ 2.79
MINDY3Q9H8M7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
MINDY3Q9H8M7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
MINDY3Q9H8M7 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.34■■■□□ 2.77
MINDY3Q9H8M7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.34■■■□□ 2.77
MINDY3Q9H8M7 AP002365.1-201ENST00000603448 772 ntBASIC32.34■■■□□ 2.77
MINDY3Q9H8M7 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
MINDY3Q9H8M7 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.76
MINDY3Q9H8M7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.26■■■□□ 2.75
MINDY3Q9H8M7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.26■■■□□ 2.75
MINDY3Q9H8M7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.24■■■□□ 2.75
MINDY3Q9H8M7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
MINDY3Q9H8M7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.23■■■□□ 2.75
MINDY3Q9H8M7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
MINDY3Q9H8M7 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
MINDY3Q9H8M7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
MINDY3Q9H8M7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
MINDY3Q9H8M7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.18■■■□□ 2.74
MINDY3Q9H8M7 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC32.14■■■□□ 2.74
MINDY3Q9H8M7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.1■■■□□ 2.73
MINDY3Q9H8M7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.04■■■□□ 2.72
MINDY3Q9H8M7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
MINDY3Q9H8M7 DYNLL1-208ENST00000550178 581 ntBASIC32.04■■■□□ 2.72
MINDY3Q9H8M7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
MINDY3Q9H8M7 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
MINDY3Q9H8M7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.03■■■□□ 2.72
MINDY3Q9H8M7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.02■■■□□ 2.72
MINDY3Q9H8M7 C11orf68-201ENST00000438576 1619 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.72
MINDY3Q9H8M7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.98■■■□□ 2.71
MINDY3Q9H8M7 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
MINDY3Q9H8M7 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms