Protein–RNA interactions for Protein: Q8WZ73

RFFL, E3 ubiquitin-protein ligase rififylin, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFFLQ8WZ73 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFFLQ8WZ73 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFFLQ8WZ73 NRG1-221ENST00000614767 762 ntTSL 5 BASIC27.23■■□□□ 1.95
RFFLQ8WZ73 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
RFFLQ8WZ73 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RFFLQ8WZ73 BX255925.1-201ENST00000566954 1854 ntBASIC27.22■■□□□ 1.95
RFFLQ8WZ73 MIR762-201ENST00000390236 83 ntBASIC27.22■■□□□ 1.95
RFFLQ8WZ73 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
RFFLQ8WZ73 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
RFFLQ8WZ73 AL121749.1-202ENST00000609313 2153 ntBASIC27.22■■□□□ 1.95
RFFLQ8WZ73 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.22■■□□□ 1.95
RFFLQ8WZ73 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
RFFLQ8WZ73 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC27.21■■□□□ 1.95
RFFLQ8WZ73 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
RFFLQ8WZ73 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.95
RFFLQ8WZ73 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
RFFLQ8WZ73 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC27.19■■□□□ 1.94
RFFLQ8WZ73 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
RFFLQ8WZ73 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
RFFLQ8WZ73 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
RFFLQ8WZ73 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
RFFLQ8WZ73 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RFFLQ8WZ73 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.16■■□□□ 1.94
RFFLQ8WZ73 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RFFLQ8WZ73 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
RFFLQ8WZ73 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RFFLQ8WZ73 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RFFLQ8WZ73 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.94
RFFLQ8WZ73 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.14■■□□□ 1.94
RFFLQ8WZ73 AC100797.4-201ENST00000631653 1827 ntBASIC27.13■■□□□ 1.93
RFFLQ8WZ73 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RFFLQ8WZ73 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC27.13■■□□□ 1.93
RFFLQ8WZ73 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RFFLQ8WZ73 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RFFLQ8WZ73 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.13■■□□□ 1.93
RFFLQ8WZ73 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RFFLQ8WZ73 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFFLQ8WZ73 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RFFLQ8WZ73 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.12■■□□□ 1.93
RFFLQ8WZ73 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
RFFLQ8WZ73 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.11■■□□□ 1.93
RFFLQ8WZ73 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.11■■□□□ 1.93
RFFLQ8WZ73 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
RFFLQ8WZ73 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
RFFLQ8WZ73 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC27.1■■□□□ 1.93
RFFLQ8WZ73 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC27.1■■□□□ 1.93
RFFLQ8WZ73 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RFFLQ8WZ73 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RFFLQ8WZ73 LINC01003-201ENST00000564834 1764 ntBASIC27.09■■□□□ 1.93
RFFLQ8WZ73 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.09■■□□□ 1.93
RFFLQ8WZ73 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RFFLQ8WZ73 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.09■■□□□ 1.93
RFFLQ8WZ73 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RFFLQ8WZ73 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RFFLQ8WZ73 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RFFLQ8WZ73 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
RFFLQ8WZ73 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
RFFLQ8WZ73 SHF-208ENST00000560734 1731 ntTSL 3 BASIC27.07■■□□□ 1.92
RFFLQ8WZ73 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.07■■□□□ 1.92
RFFLQ8WZ73 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC27.07■■□□□ 1.92
RFFLQ8WZ73 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RFFLQ8WZ73 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC27.07■■□□□ 1.92
RFFLQ8WZ73 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC27.06■■□□□ 1.92
RFFLQ8WZ73 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RFFLQ8WZ73 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
RFFLQ8WZ73 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC27.05■■□□□ 1.92
RFFLQ8WZ73 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
RFFLQ8WZ73 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RFFLQ8WZ73 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.04■■□□□ 1.92
RFFLQ8WZ73 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.04■■□□□ 1.92
RFFLQ8WZ73 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
RFFLQ8WZ73 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RFFLQ8WZ73 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
RFFLQ8WZ73 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
RFFLQ8WZ73 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
RFFLQ8WZ73 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.03■■□□□ 1.92
RFFLQ8WZ73 AC005559.1-201ENST00000589661 871 ntBASIC27.03■■□□□ 1.92
RFFLQ8WZ73 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC27.02■■□□□ 1.92
RFFLQ8WZ73 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC27.02■■□□□ 1.92
RFFLQ8WZ73 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
RFFLQ8WZ73 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RFFLQ8WZ73 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC27.01■■□□□ 1.91
RFFLQ8WZ73 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC27.01■■□□□ 1.91
RFFLQ8WZ73 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RFFLQ8WZ73 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RFFLQ8WZ73 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC27■■□□□ 1.91
RFFLQ8WZ73 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC27■■□□□ 1.91
RFFLQ8WZ73 AP002414.2-202ENST00000590929 1450 ntBASIC27■■□□□ 1.91
RFFLQ8WZ73 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFFLQ8WZ73 MIR3665-201ENST00000578708 105 ntBASIC26.99■■□□□ 1.91
RFFLQ8WZ73 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFFLQ8WZ73 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFFLQ8WZ73 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
RFFLQ8WZ73 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.98■■□□□ 1.91
RFFLQ8WZ73 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RFFLQ8WZ73 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.98■■□□□ 1.91
RFFLQ8WZ73 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
RFFLQ8WZ73 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
RFFLQ8WZ73 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.97■■□□□ 1.91
RFFLQ8WZ73 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms