Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC33.5■■■□□ 2.95
CHL1O00533 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC33.5■■■□□ 2.95
CHL1O00533 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC33.5■■■□□ 2.95
CHL1O00533 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC33.49■■■□□ 2.95
CHL1O00533 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC33.48■■■□□ 2.95
CHL1O00533 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC33.48■■■□□ 2.95
CHL1O00533 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHL1O00533 MIR639-201ENST00000384974 98 ntBASIC33.47■■■□□ 2.95
CHL1O00533 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC33.47■■■□□ 2.95
CHL1O00533 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHL1O00533 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
CHL1O00533 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC33.45■■■□□ 2.95
CHL1O00533 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC33.45■■■□□ 2.95
CHL1O00533 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC33.44■■■□□ 2.94
CHL1O00533 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHL1O00533 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHL1O00533 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
CHL1O00533 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC33.42■■■□□ 2.94
CHL1O00533 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC33.42■■■□□ 2.94
CHL1O00533 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
CHL1O00533 AP004833.2-201ENST00000532228 1454 ntBASIC33.42■■■□□ 2.94
CHL1O00533 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC33.41■■■□□ 2.94
CHL1O00533 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC33.41■■■□□ 2.94
CHL1O00533 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
CHL1O00533 AL139393.2-201ENST00000608721 2025 ntBASIC33.41■■■□□ 2.94
CHL1O00533 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC33.4■■■□□ 2.94
CHL1O00533 HES6-205ENST00000409356 528 ntTSL 2 BASIC33.4■■■□□ 2.94
CHL1O00533 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC33.4■■■□□ 2.94
CHL1O00533 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC33.4■■■□□ 2.94
CHL1O00533 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC33.39■■■□□ 2.93
CHL1O00533 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
CHL1O00533 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
CHL1O00533 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC33.37■■■□□ 2.93
CHL1O00533 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHL1O00533 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHL1O00533 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC33.36■■■□□ 2.93
CHL1O00533 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC33.35■■■□□ 2.93
CHL1O00533 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC33.35■■■□□ 2.93
CHL1O00533 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC33.35■■■□□ 2.93
CHL1O00533 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC33.34■■■□□ 2.93
CHL1O00533 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC33.34■■■□□ 2.93
CHL1O00533 MEST-211ENST00000437945 1455 ntTSL 5 BASIC33.33■■■□□ 2.93
CHL1O00533 MIR4449-201ENST00000578365 66 ntBASIC33.33■■■□□ 2.93
CHL1O00533 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC33.31■■■□□ 2.92
CHL1O00533 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC33.29■■■□□ 2.92
CHL1O00533 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CHL1O00533 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC33.29■■■□□ 2.92
CHL1O00533 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC33.28■■■□□ 2.92
CHL1O00533 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC33.28■■■□□ 2.92
CHL1O00533 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC33.28■■■□□ 2.92
CHL1O00533 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC33.28■■■□□ 2.92
CHL1O00533 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC33.28■■■□□ 2.92
CHL1O00533 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHL1O00533 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC33.28■■■□□ 2.92
CHL1O00533 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
CHL1O00533 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC33.27■■■□□ 2.92
CHL1O00533 METRNL-202ENST00000570778 967 ntTSL 5 BASIC33.27■■■□□ 2.92
CHL1O00533 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC33.26■■■□□ 2.92
CHL1O00533 CHST11-202ENST00000546689 756 ntTSL 2 BASIC33.26■■■□□ 2.91
CHL1O00533 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC33.26■■■□□ 2.91
CHL1O00533 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC33.25■■■□□ 2.91
CHL1O00533 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC33.25■■■□□ 2.91
CHL1O00533 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC33.25■■■□□ 2.91
CHL1O00533 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC33.25■■■□□ 2.91
CHL1O00533 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC33.24■■■□□ 2.91
CHL1O00533 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHL1O00533 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHL1O00533 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHL1O00533 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHL1O00533 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC33.23■■■□□ 2.91
CHL1O00533 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC33.23■■■□□ 2.91
CHL1O00533 AC110285.7-201ENST00000624417 1536 ntBASIC33.23■■■□□ 2.91
CHL1O00533 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC33.21■■■□□ 2.91
CHL1O00533 AC100797.4-201ENST00000631653 1827 ntBASIC33.21■■■□□ 2.91
CHL1O00533 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC33.21■■■□□ 2.91
CHL1O00533 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC33.21■■■□□ 2.91
CHL1O00533 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC33.2■■■□□ 2.91
CHL1O00533 PEX7-203ENST00000541292 945 ntTSL 5 BASIC33.19■■■□□ 2.9
CHL1O00533 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC33.18■■■□□ 2.9
CHL1O00533 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC33.17■■■□□ 2.9
CHL1O00533 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CHL1O00533 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
CHL1O00533 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC33.16■■■□□ 2.9
CHL1O00533 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CHL1O00533 ABCB10P3-201ENST00000561950 2166 ntBASIC33.14■■■□□ 2.9
CHL1O00533 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC33.14■■■□□ 2.9
CHL1O00533 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CHL1O00533 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CHL1O00533 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC33.14■■■□□ 2.9
CHL1O00533 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHL1O00533 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CHL1O00533 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC33.13■■■□□ 2.89
CHL1O00533 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC33.12■■■□□ 2.89
CHL1O00533 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CHL1O00533 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHL1O00533 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CHL1O00533 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC33.11■■■□□ 2.89
CHL1O00533 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC33.11■■■□□ 2.89
CHL1O00533 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CHL1O00533 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC33.11■■■□□ 2.89
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms