Protein–RNA interactions for Protein: A6H8M9

CDHR4, Cadherin-related family member 4, humanhuman

Predictions only

Length 788 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4A6H8M9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
CDHR4A6H8M9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
CDHR4A6H8M9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR4A6H8M9 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CDHR4A6H8M9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC23.58■■□□□ 1.37
CDHR4A6H8M9 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.58■■□□□ 1.36
CDHR4A6H8M9 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.57■■□□□ 1.36
CDHR4A6H8M9 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR4A6H8M9 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.57■■□□□ 1.36
CDHR4A6H8M9 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CDHR4A6H8M9 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR4A6H8M9 AC100797.4-201ENST00000631653 1827 ntBASIC23.56■■□□□ 1.36
CDHR4A6H8M9 AL162393.1-201ENST00000437852 946 ntBASIC23.56■■□□□ 1.36
CDHR4A6H8M9 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC23.56■■□□□ 1.36
CDHR4A6H8M9 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR4A6H8M9 AC087741.3-201ENST00000624270 1347 ntBASIC23.56■■□□□ 1.36
CDHR4A6H8M9 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CDHR4A6H8M9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR4A6H8M9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.55■■□□□ 1.36
CDHR4A6H8M9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR4A6H8M9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
CDHR4A6H8M9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CDHR4A6H8M9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
CDHR4A6H8M9 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR4A6H8M9 AC135983.2-203ENST00000454486 1613 ntBASIC23.53■■□□□ 1.36
CDHR4A6H8M9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR4A6H8M9 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CDHR4A6H8M9 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.53■■□□□ 1.36
CDHR4A6H8M9 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.52■■□□□ 1.36
CDHR4A6H8M9 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDHR4A6H8M9 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.51■■□□□ 1.35
CDHR4A6H8M9 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CDHR4A6H8M9 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CDHR4A6H8M9 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CDHR4A6H8M9 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.5■■□□□ 1.35
CDHR4A6H8M9 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
CDHR4A6H8M9 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.5■■□□□ 1.35
CDHR4A6H8M9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.5■■□□□ 1.35
CDHR4A6H8M9 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDHR4A6H8M9 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.49■■□□□ 1.35
CDHR4A6H8M9 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CDHR4A6H8M9 LINC00273-201ENST00000539813 1452 ntBASIC23.49■■□□□ 1.35
CDHR4A6H8M9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CDHR4A6H8M9 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.48■■□□□ 1.35
CDHR4A6H8M9 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.48■■□□□ 1.35
CDHR4A6H8M9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CDHR4A6H8M9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC23.47■■□□□ 1.35
CDHR4A6H8M9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDHR4A6H8M9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
CDHR4A6H8M9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
CDHR4A6H8M9 WHAMMP2-203ENST00000563942 1603 ntBASIC23.46■■□□□ 1.35
CDHR4A6H8M9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
CDHR4A6H8M9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.45■■□□□ 1.34
CDHR4A6H8M9 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDHR4A6H8M9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDHR4A6H8M9 AC044849.2-201ENST00000606596 710 ntBASIC23.45■■□□□ 1.34
CDHR4A6H8M9 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CDHR4A6H8M9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CDHR4A6H8M9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC23.44■■□□□ 1.34
CDHR4A6H8M9 CIB2-204ENST00000557846 934 ntTSL 3 BASIC23.44■■□□□ 1.34
CDHR4A6H8M9 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDHR4A6H8M9 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
CDHR4A6H8M9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
CDHR4A6H8M9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDHR4A6H8M9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
CDHR4A6H8M9 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
CDHR4A6H8M9 BX255925.1-201ENST00000566954 1854 ntBASIC23.43■■□□□ 1.34
CDHR4A6H8M9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
CDHR4A6H8M9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.42■■□□□ 1.34
CDHR4A6H8M9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
CDHR4A6H8M9 AP002414.2-202ENST00000590929 1450 ntBASIC23.42■■□□□ 1.34
CDHR4A6H8M9 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
CDHR4A6H8M9 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
CDHR4A6H8M9 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC23.41■■□□□ 1.34
CDHR4A6H8M9 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
CDHR4A6H8M9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDHR4A6H8M9 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.4■■□□□ 1.34
CDHR4A6H8M9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDHR4A6H8M9 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
CDHR4A6H8M9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDHR4A6H8M9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDHR4A6H8M9 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.34
CDHR4A6H8M9 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
CDHR4A6H8M9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDHR4A6H8M9 CALM3-209ENST00000597743 577 ntTSL 4 BASIC23.39■■□□□ 1.33
CDHR4A6H8M9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.39■■□□□ 1.33
CDHR4A6H8M9 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
CDHR4A6H8M9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDHR4A6H8M9 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDHR4A6H8M9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
CDHR4A6H8M9 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.38■■□□□ 1.33
CDHR4A6H8M9 LINC01003-201ENST00000564834 1764 ntBASIC23.37■■□□□ 1.33
CDHR4A6H8M9 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms