Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC16.81■□□□□ 0.286e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.8■□□□□ 0.288e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-217ENST00000609442 555 ntTSL 316.8■□□□□ 0.288e-8■■■■□ 21.6
XRN2Q9H0D6 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.76■□□□□ 0.276e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-261ENST00000493709 715 ntTSL 316.72■□□□□ 0.276e-7■■■■□ 21.6
XRN2Q9H0D6 GALE-203ENST00000425913 876 ntTSL 516.69■□□□□ 0.268e-10■■■■□ 21.6
XRN2Q9H0D6 SOX13-201ENST00000272193 1754 ntTSL 216.68■□□□□ 0.266e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-206ENST00000608461 587 ntTSL 216.65■□□□□ 0.266e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-209ENST00000609477 564 ntTSL 416.65■□□□□ 0.266e-7■■■■□ 21.6
XRN2Q9H0D6 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.266e-7■■■■□ 21.6
XRN2Q9H0D6 MOB2-206ENST00000531976 3174 ntTSL 1 (best)16.62■□□□□ 0.256e-7■■■■□ 21.6
XRN2Q9H0D6 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.259e-7■■■■□ 21.6
XRN2Q9H0D6 CHID1-224ENST00000534254 1019 ntTSL 516.61■□□□□ 0.256e-7■■■■□ 21.6
XRN2Q9H0D6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.243e-7■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-209ENST00000473815 476 ntTSL 316.5■□□□□ 0.236e-7■■■■□ 21.6
XRN2Q9H0D6 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.236e-7■■■■□ 21.6
XRN2Q9H0D6 DPP9-204ENST00000595327 423 ntTSL 316.46■□□□□ 0.238e-10■■■■□ 21.6
XRN2Q9H0D6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.45■□□□□ 0.226e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-213ENST00000566947 453 ntTSL 216.39■□□□□ 0.216e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-213ENST00000608198 578 ntTSL 516.38■□□□□ 0.218e-8■■■■□ 21.6
XRN2Q9H0D6 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.213e-7■■■■□ 21.6
XRN2Q9H0D6 ZGPAT-209ENST00000477340 2831 ntTSL 216.26■□□□□ 0.196e-7■■■■□ 21.6
XRN2Q9H0D6 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 316.21■□□□□ 0.196e-7■■■■□ 21.6
XRN2Q9H0D6 AMDHD2-204ENST00000561487 701 ntTSL 216.17■□□□□ 0.186e-7■■■■□ 21.6
XRN2Q9H0D6 HMGN1-211ENST00000471260 615 ntTSL 316.15■□□□□ 0.182e-13■■■■□ 21.6
XRN2Q9H0D6 HPS1-203ENST00000359632 978 ntTSL 316.13■□□□□ 0.176e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-207ENST00000574016 557 ntTSL 416.06■□□□□ 0.168e-8■■■■□ 21.6
XRN2Q9H0D6 CLSTN3-205ENST00000535452 533 ntTSL 416.03■□□□□ 0.166e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-205ENST00000573075 556 ntTSL 415.99■□□□□ 0.158e-8■■■■□ 21.6
XRN2Q9H0D6 IKBKB-203ENST00000517388 577 ntTSL 415.97■□□□□ 0.156e-7■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.146e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-209ENST00000575626 624 ntTSL 315.81■□□□□ 0.128e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-219ENST00000610106 450 ntTSL 515.81■□□□□ 0.128e-8■■■■□ 21.6
XRN2Q9H0D6 HPS1-209ENST00000470095 801 ntTSL 515.74■□□□□ 0.116e-7■■■■□ 21.6
XRN2Q9H0D6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.71■□□□□ 0.118e-10■■■■□ 21.6
XRN2Q9H0D6 HPS1-211ENST00000478087 971 ntTSL 515.58■□□□□ 0.086e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-213ENST00000532134 855 ntTSL 515.58■□□□□ 0.083e-7■■■■□ 21.6
XRN2Q9H0D6 CHID1-219ENST00000531859 834 ntTSL 515.58■□□□□ 0.086e-7■■■■□ 21.6
XRN2Q9H0D6 TNRC6A-211ENST00000566108 454 ntTSL 315.5■□□□□ 0.071e-37■■■■□ 21.6
XRN2Q9H0D6 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.075e-6■■■■□ 21.6
XRN2Q9H0D6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.43■□□□□ 0.068e-10■■■■□ 21.6
XRN2Q9H0D6 DDX11-214ENST00000539673 652 ntTSL 315.41■□□□□ 0.066e-7■■■■□ 21.6
XRN2Q9H0D6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.4■□□□□ 0.061e-6■■■■□ 21.6
XRN2Q9H0D6 SNORD88B-201ENST00000408454 91 ntBASIC15.4■□□□□ 0.064e-45■■■■□ 21.6
XRN2Q9H0D6 CC2D1A-203ENST00000586955 2743 ntTSL 1 (best)15.38■□□□□ 0.056e-7■■■■□ 21.6
XRN2Q9H0D6 PKD1P5-201ENST00000532415 10291 ntBASIC15.38■□□□□ 0.056e-7■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.056e-7■■■■□ 21.6
XRN2Q9H0D6 LMF1-203ENST00000545827 2731 ntTSL 215.3■□□□□ 0.041e-12■■■■□ 21.6
XRN2Q9H0D6 IKBKB-208ENST00000518647 1543 ntTSL 215.24■□□□□ 0.036e-7■■■■□ 21.6
XRN2Q9H0D6 NHSL1-205ENST00000468095 459 ntTSL 315.23■□□□□ 0.036e-7■■■■□ 21.6
XRN2Q9H0D6 CHFR-202ENST00000315585 2446 ntTSL 215.2■□□□□ 0.023e-7■■■■□ 21.6
XRN2Q9H0D6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.026e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-250ENST00000478249 594 ntTSL 515.16■□□□□ 0.026e-7■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 06e-7■■■■□ 21.6
XRN2Q9H0D6 IKBKB-215ENST00000520320 628 ntTSL 515□□□□□ -0.016e-7■■■■□ 21.6
XRN2Q9H0D6 SORBS2-242ENST00000463104 567 ntTSL 514.99□□□□□ -0.016e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-203ENST00000571091 525 ntTSL 214.96□□□□□ -0.018e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-218ENST00000609990 610 ntTSL 514.96□□□□□ -0.018e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC14.96□□□□□ -0.018e-8■■■■□ 21.6
XRN2Q9H0D6 LINC00910-201ENST00000341011 2303 ntTSL 1 (best) BASIC14.87□□□□□ -0.038e-10■■■■□ 21.6
XRN2Q9H0D6 COL18A1-206ENST00000459895 588 ntTSL 314.79□□□□□ -0.046e-7■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-210ENST00000576489 648 ntTSL 414.79□□□□□ -0.048e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-214ENST00000608245 465 ntTSL 514.79□□□□□ -0.048e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-216ENST00000609398 584 ntTSL 514.79□□□□□ -0.048e-8■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-215ENST00000608913 570 ntTSL 514.79□□□□□ -0.048e-8■■■■□ 21.6
XRN2Q9H0D6 ATP2A2-211ENST00000552636 529 ntTSL 4 BASIC14.79□□□□□ -0.048e-10■■■■□ 21.6
XRN2Q9H0D6 PPP6R1-208ENST00000592242 574 ntTSL 414.78□□□□□ -0.046e-7■■■■□ 21.6
XRN2Q9H0D6 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.62□□□□□ -0.073e-7■■■■□ 21.6
XRN2Q9H0D6 LONP1-206ENST00000587552 2816 ntTSL 214.59□□□□□ -0.071e-6■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-211ENST00000576749 754 ntTSL 214.54□□□□□ -0.088e-8■■■■□ 21.6
XRN2Q9H0D6 DDX11-211ENST00000538345 498 ntTSL 514.5□□□□□ -0.096e-7■■■■□ 21.6
XRN2Q9H0D6 EHMT2-202ENST00000375530 3856 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.18e-10■■■■□ 21.6
XRN2Q9H0D6 AC004771.2-201ENST00000430920 439 ntTSL 3 BASIC14.36□□□□□ -0.116e-6■■■■□ 21.6
XRN2Q9H0D6 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.33□□□□□ -0.121e-11■■■■□ 21.6
XRN2Q9H0D6 GPR108-204ENST00000594034 778 ntTSL 314.29□□□□□ -0.126e-7■■■■□ 21.6
XRN2Q9H0D6 CLSTN3-211ENST00000541667 671 ntTSL 414.26□□□□□ -0.136e-7■■■■□ 21.6
XRN2Q9H0D6 CFL1-207ENST00000527752 766 ntTSL 514.19□□□□□ -0.143e-7■■■■□ 21.6
XRN2Q9H0D6 LINC00910-204ENST00000588654 541 ntTSL 414.18□□□□□ -0.148e-10■■■■□ 21.6
XRN2Q9H0D6 MIR22HG-208ENST00000574306 2626 ntTSL 1 (best) BASIC14.18□□□□□ -0.148e-8■■■■□ 21.6
XRN2Q9H0D6 EHMT2-203ENST00000375537 3965 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.158e-10■■■■□ 21.6
XRN2Q9H0D6 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.156e-7■■■■□ 21.6
XRN2Q9H0D6 HMGN1-213ENST00000482192 793 ntTSL 314.07□□□□□ -0.162e-13■■■■□ 21.6
XRN2Q9H0D6 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.166e-7■■■■□ 21.6
XRN2Q9H0D6 MOB2-202ENST00000526462 795 ntTSL 214.03□□□□□ -0.166e-7■■■■□ 21.6
XRN2Q9H0D6 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.186e-7■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.94□□□□□ -0.186e-7■■■■□ 21.6
XRN2Q9H0D6 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.28e-10■■■■□ 21.6
XRN2Q9H0D6 SORBS2-205ENST00000393523 842 ntTSL 413.81□□□□□ -0.26e-7■■■■□ 21.6
XRN2Q9H0D6 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.216e-7■■■■□ 21.6
XRN2Q9H0D6 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.226e-7■■■■□ 21.6
XRN2Q9H0D6 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.66□□□□□ -0.226e-7■■■■□ 21.6
XRN2Q9H0D6 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.236e-7■■■■□ 21.6
XRN2Q9H0D6 ZMYND11-205ENST00000381607 3898 ntTSL 1 (best) BASIC13.57□□□□□ -0.246e-7■■■■□ 21.6
XRN2Q9H0D6 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.256e-7■■■■□ 21.6
XRN2Q9H0D6 HPS1-201ENST00000325103 3703 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.276e-7■■■■□ 21.6
XRN2Q9H0D6 PICK1-215ENST00000494434 559 ntTSL 413.34□□□□□ -0.276e-7■■■■□ 21.6
XRN2Q9H0D6 CHID1-207ENST00000524832 878 ntTSL 213.34□□□□□ -0.276e-7■■■■□ 21.6
XRN2Q9H0D6 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.31□□□□□ -0.281e-6■■■■□ 21.6
XRN2Q9H0D6 INTS1-202ENST00000468115 3051 ntTSL 213.2□□□□□ -0.36e-7■■■■□ 21.6
XRN2Q9H0D6 DNM2-210ENST00000587830 868 ntTSL 513.18□□□□□ -0.36e-7■■■■□ 21.6
Retrieved 100 of 21,068 protein–RNA pairs in 84.5 ms