RNA–Protein interactions for RNA: ENST00000517388.5

IKBKB-203, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 4

Gene IKBKB, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-203ENST00000517388 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
IKBKB-203ENST00000517388 CCDC180Q9P1Z9 1646 aa30■■■□□ 2.39
IKBKB-203ENST00000517388 ABCC9O60706 1549 aa29.53■■■□□ 2.32
IKBKB-203ENST00000517388 RB1CC1Q8TDY2 1594 aa28.24■■■□□ 2.11
IKBKB-203ENST00000517388 NACADO15069 1562 aa28.16■■■□□ 2.1
IKBKB-203ENST00000517388 ZCCHC6Q5VYS8 1495 aaKnown RBP27.97■■■□□ 2.07
IKBKB-203ENST00000517388 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
IKBKB-203ENST00000517388 UNC13AQ9UPW8 1703 aa27.88■■■□□ 2.05
IKBKB-203ENST00000517388 DCAF8L2P0C7V8 631 aa27.82■■■□□ 2.04
IKBKB-203ENST00000517388 DCAF1Q9Y4B6 1507 aa27.76■■■□□ 2.03
IKBKB-203ENST00000517388 BICRAQ9NZM4 1560 aa27.64■■■□□ 2.01
IKBKB-203ENST00000517388 PABPN1Q86U42 306 aaKnown RBP eCLIP27.48■■□□□ 1.99
IKBKB-203ENST00000517388 DNAJC5BQ9UF47 199 aa27.44■■□□□ 1.98
IKBKB-203ENST00000517388 SCRIBQ14160 1630 aa27.35■■□□□ 1.97
IKBKB-203ENST00000517388 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
IKBKB-203ENST00000517388 EIF4G1Q04637 1599 aaKnown RBP26.8■■□□□ 1.88
IKBKB-203ENST00000517388 CC2D2AQ9P2K1 1620 aa26.76■■□□□ 1.87
IKBKB-203ENST00000517388 CECR2Q9BXF3 1484 aa26.53■■□□□ 1.84
IKBKB-203ENST00000517388 SMARCA4P51532 1647 aa26.15■■□□□ 1.78
IKBKB-203ENST00000517388 ATAD2BQ9ULI0 1458 aa26.03■■□□□ 1.76
IKBKB-203ENST00000517388 NCAPD3P42695 1498 aa26.01■■□□□ 1.75
IKBKB-203ENST00000517388 BAZ1AQ9NRL2 1556 aaPredicted RBP25.98■■□□□ 1.75
IKBKB-203ENST00000517388 MROH2BQ7Z745 1585 aa25.94■■□□□ 1.74
IKBKB-203ENST00000517388 PEG3Q9GZU2 1588 aa25.92■■□□□ 1.74
IKBKB-203ENST00000517388 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
IKBKB-203ENST00000517388 SMARCA2P51531 1590 aa25.9■■□□□ 1.74
IKBKB-203ENST00000517388 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
IKBKB-203ENST00000517388 WIZO95785 1651 aa25.65■■□□□ 1.7
IKBKB-203ENST00000517388 NESP48681 1621 aa25.57■■□□□ 1.68
IKBKB-203ENST00000517388 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
IKBKB-203ENST00000517388 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
IKBKB-203ENST00000517388 ERCC6Q03468 1493 aa25.33■■□□□ 1.65
IKBKB-203ENST00000517388 THOC2Q8NI27 1593 aaKnown RBP25.31■■□□□ 1.64
IKBKB-203ENST00000517388 TOP2AP11388 1531 aaKnown RBP25.3■■□□□ 1.64
IKBKB-203ENST00000517388 KIF21AQ7Z4S6 1674 aa25.29■■□□□ 1.64
IKBKB-203ENST00000517388 CUX2O14529 1486 aa25.24■■□□□ 1.63
IKBKB-203ENST00000517388 CADPSQ9ULU8 1353 aa25.18■■□□□ 1.62
IKBKB-203ENST00000517388 PDS5BQ9NTI5 1447 aa25.07■■□□□ 1.6
IKBKB-203ENST00000517388 CFTRP13569 1480 aa25.06■■□□□ 1.6
IKBKB-203ENST00000517388 CCDC88BA6NC98 1476 aa24.99■■□□□ 1.59
IKBKB-203ENST00000517388 WDR62O43379 1518 aa24.96■■□□□ 1.59
IKBKB-203ENST00000517388 MRC2Q9UBG0 1479 aa24.95■■□□□ 1.58
IKBKB-203ENST00000517388 PRDM2Q13029 1718 aa24.95■■□□□ 1.58
IKBKB-203ENST00000517388 FANCD2Q9BXW9 1451 aa24.94■■□□□ 1.58
IKBKB-203ENST00000517388 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
IKBKB-203ENST00000517388 URB2Q14146 1524 aaKnown RBP24.81■■□□□ 1.56
IKBKB-203ENST00000517388 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
IKBKB-203ENST00000517388 TOPBP1Q92547 1522 aa24.56■■□□□ 1.52
IKBKB-203ENST00000517388 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
IKBKB-203ENST00000517388 ZNF608Q9ULD9 1512 aaPredicted RBP24.44■■□□□ 1.5
IKBKB-203ENST00000517388 SUPT5HO00267 1087 aaKnown RBP24.42■■□□□ 1.5
IKBKB-203ENST00000517388 TARBP1Q13395 1621 aaKnown RBP24.4■■□□□ 1.5
IKBKB-203ENST00000517388 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
IKBKB-203ENST00000517388 ABCC8Q09428 1581 aa24.36■■□□□ 1.49
IKBKB-203ENST00000517388 CUX1P39880 1505 aa24.35■■□□□ 1.49
IKBKB-203ENST00000517388 POLA1P09884 1462 aaPredicted RBP24.34■■□□□ 1.49
IKBKB-203ENST00000517388 EIF4G3O43432 1585 aaKnown RBP24.33■■□□□ 1.49
IKBKB-203ENST00000517388 RAD54L2Q9Y4B4 1467 aa24.25■■□□□ 1.47
IKBKB-203ENST00000517388 FGD5Q6ZNL6 1462 aa24.23■■□□□ 1.47
IKBKB-203ENST00000517388 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
IKBKB-203ENST00000517388 AQRO60306 1485 aaKnown RBP eCLIP24.18■■□□□ 1.466e-6■■■■□ 25.1
IKBKB-203ENST00000517388 SOGA1O94964 1423 aa24.1■■□□□ 1.45
IKBKB-203ENST00000517388 CHD1O14646 1710 aa24.1■■□□□ 1.45
IKBKB-203ENST00000517388 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
IKBKB-203ENST00000517388 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
IKBKB-203ENST00000517388 TDRD9Q8NDG6 1382 aaKnown RBP24.04■■□□□ 1.44
IKBKB-203ENST00000517388 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
IKBKB-203ENST00000517388 ABCA5Q8WWZ7 1642 aa24■■□□□ 1.43
IKBKB-203ENST00000517388 OSCARQ8IYS5 282 aa23.98■■□□□ 1.43
IKBKB-203ENST00000517388 ABCA10Q8WWZ4 1543 aa23.98■■□□□ 1.43
IKBKB-203ENST00000517388 PBRM1Q86U86 1689 aa23.98■■□□□ 1.43
IKBKB-203ENST00000517388 SNAPC4Q5SXM2 1469 aa23.97■■□□□ 1.43
IKBKB-203ENST00000517388 WRNQ14191 1432 aaPredicted RBP eCLIP23.94■■□□□ 1.42
IKBKB-203ENST00000517388 RIMBP3CA6NJZ7 1639 aa23.92■■□□□ 1.42
IKBKB-203ENST00000517388 RIMBP3BA6NNM3 1639 aa23.92■■□□□ 1.42
IKBKB-203ENST00000517388 RIMBP3Q9UFD9 1639 aa23.92■■□□□ 1.42
IKBKB-203ENST00000517388 GRIN2BQ13224 1484 aa23.88■■□□□ 1.41
IKBKB-203ENST00000517388 GAPVD1Q14C86 1478 aa23.87■■□□□ 1.41
IKBKB-203ENST00000517388 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
IKBKB-203ENST00000517388 ARHGEF11O15085 1522 aa23.84■■□□□ 1.41
IKBKB-203ENST00000517388 CLASP1Q7Z460 1538 aa23.84■■□□□ 1.41
IKBKB-203ENST00000517388 SYNJ2O15056 1496 aa23.79■■□□□ 1.4
IKBKB-203ENST00000517388 ADAMTS12P58397 1594 aa23.78■■□□□ 1.4
IKBKB-203ENST00000517388 FBLN2P98095 1184 aa23.7■■□□□ 1.38
IKBKB-203ENST00000517388 TRIM41Q8WV44 630 aa23.7■■□□□ 1.38
IKBKB-203ENST00000517388 ARAP1Q96P48 1450 aa23.68■■□□□ 1.38
IKBKB-203ENST00000517388 ERICH3Q5RHP9 1530 aa23.65■■□□□ 1.38
IKBKB-203ENST00000517388 GRIN2AQ12879 1464 aa23.64■■□□□ 1.38
IKBKB-203ENST00000517388 CEP170Q5SW79 1584 aa23.64■■□□□ 1.37
IKBKB-203ENST00000517388 CHMP7Q8WUX9 453 aaPredicted RBP23.6■■□□□ 1.37
IKBKB-203ENST00000517388 NUP160Q12769 1436 aa23.58■■□□□ 1.36
IKBKB-203ENST00000517388 FHAD1B1AJZ9 1412 aa23.56■■□□□ 1.36
IKBKB-203ENST00000517388 ERCC6L2Q5T890 1561 aa23.55■■□□□ 1.36
IKBKB-203ENST00000517388 SHROOM2Q13796 1616 aa23.51■■□□□ 1.35
IKBKB-203ENST00000517388 RUSC2Q8N2Y8 1516 aa23.44■■□□□ 1.34
IKBKB-203ENST00000517388 CYB5RLQ6IPT4 315 aa23.43■■□□□ 1.34
IKBKB-203ENST00000517388 IGF1RP08069 1367 aa23.42■■□□□ 1.34
IKBKB-203ENST00000517388 CUL7Q14999 1698 aa23.4■■□□□ 1.34
IKBKB-203ENST00000517388 KIF27Q86VH2 1401 aa23.39■■□□□ 1.33
IKBKB-203ENST00000517388 CARMIL1Q5VZK9 1371 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms