RNA–Protein interactions for RNA: ENST00000552636.1

ATP2A2-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 4 BASIC

Gene ATP2A2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-211ENST00000552636 NISCHQ9Y2I1 1504 aa30.69■■■□□ 2.5
ATP2A2-211ENST00000552636 CCDC180Q9P1Z9 1646 aa27.25■■□□□ 1.95
ATP2A2-211ENST00000552636 ABCC9O60706 1549 aa26.61■■□□□ 1.85
ATP2A2-211ENST00000552636 NACADO15069 1562 aa25.68■■□□□ 1.7
ATP2A2-211ENST00000552636 RB1CC1Q8TDY2 1594 aa25.67■■□□□ 1.7
ATP2A2-211ENST00000552636 DCAF8L2P0C7V8 631 aa25.63■■□□□ 1.69
ATP2A2-211ENST00000552636 MYO15BQ96JP2 1530 aa25.58■■□□□ 1.69
ATP2A2-211ENST00000552636 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
ATP2A2-211ENST00000552636 DCAF1Q9Y4B6 1507 aa25.46■■□□□ 1.67
ATP2A2-211ENST00000552636 UNC13AQ9UPW8 1703 aa24.92■■□□□ 1.58
ATP2A2-211ENST00000552636 PABPN1Q86U42 306 aaKnown RBP eCLIP24.9■■□□□ 1.58
ATP2A2-211ENST00000552636 BICRAQ9NZM4 1560 aa24.82■■□□□ 1.56
ATP2A2-211ENST00000552636 SCRIBQ14160 1630 aa24.81■■□□□ 1.56
ATP2A2-211ENST00000552636 SHROOM4Q9ULL8 1493 aa24.73■■□□□ 1.55
ATP2A2-211ENST00000552636 DNAJC5BQ9UF47 199 aa24.4■■□□□ 1.5
ATP2A2-211ENST00000552636 EIF4G1Q04637 1599 aaKnown RBP24.2■■□□□ 1.47
ATP2A2-211ENST00000552636 CC2D2AQ9P2K1 1620 aa24.07■■□□□ 1.44
ATP2A2-211ENST00000552636 CECR2Q9BXF3 1484 aa23.96■■□□□ 1.43
ATP2A2-211ENST00000552636 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
ATP2A2-211ENST00000552636 SMARCA4P51532 1647 aa23.77■■□□□ 1.4
ATP2A2-211ENST00000552636 NCAPD3P42695 1498 aa23.71■■□□□ 1.39
ATP2A2-211ENST00000552636 SMARCA2P51531 1590 aa23.69■■□□□ 1.38
ATP2A2-211ENST00000552636 ATAD2BQ9ULI0 1458 aa23.68■■□□□ 1.38
ATP2A2-211ENST00000552636 MROH2BQ7Z745 1585 aa23.6■■□□□ 1.37
ATP2A2-211ENST00000552636 PEG3Q9GZU2 1588 aa23.59■■□□□ 1.37
ATP2A2-211ENST00000552636 HMGXB3Q12766 1538 aa23.56■■□□□ 1.36
ATP2A2-211ENST00000552636 BAZ1BQ9UIG0 1483 aaKnown RBP23.49■■□□□ 1.35
ATP2A2-211ENST00000552636 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
ATP2A2-211ENST00000552636 WIZO95785 1651 aa23.3■■□□□ 1.32
ATP2A2-211ENST00000552636 TOP2AP11388 1531 aaKnown RBP23.14■■□□□ 1.3
ATP2A2-211ENST00000552636 LAMC3Q9Y6N6 1575 aa23.05■■□□□ 1.28
ATP2A2-211ENST00000552636 CADPSQ9ULU8 1353 aa23.01■■□□□ 1.27
ATP2A2-211ENST00000552636 NESP48681 1621 aa23.01■■□□□ 1.27
ATP2A2-211ENST00000552636 ERCC6Q03468 1493 aa23.01■■□□□ 1.27
ATP2A2-211ENST00000552636 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
ATP2A2-211ENST00000552636 CFTRP13569 1480 aa22.87■■□□□ 1.25
ATP2A2-211ENST00000552636 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
ATP2A2-211ENST00000552636 SUPT5HO00267 1087 aaKnown RBP22.79■■□□□ 1.24
ATP2A2-211ENST00000552636 CUX2O14529 1486 aa22.79■■□□□ 1.24
ATP2A2-211ENST00000552636 FANCD2Q9BXW9 1451 aa22.72■■□□□ 1.23
ATP2A2-211ENST00000552636 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
ATP2A2-211ENST00000552636 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
ATP2A2-211ENST00000552636 CEP164Q9UPV0 1460 aa22.69■■□□□ 1.22
ATP2A2-211ENST00000552636 THOC2Q8NI27 1593 aaKnown RBP22.67■■□□□ 1.22
ATP2A2-211ENST00000552636 MRC2Q9UBG0 1479 aa22.66■■□□□ 1.22
ATP2A2-211ENST00000552636 PRDM2Q13029 1718 aa22.57■■□□□ 1.2
ATP2A2-211ENST00000552636 WDR62O43379 1518 aa22.56■■□□□ 1.2
ATP2A2-211ENST00000552636 URB2Q14146 1524 aaKnown RBP22.44■■□□□ 1.18
ATP2A2-211ENST00000552636 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
ATP2A2-211ENST00000552636 TOPBP1Q92547 1522 aa22.33■■□□□ 1.17
ATP2A2-211ENST00000552636 DNMBPQ6XZF7 1577 aa22.31■■□□□ 1.16
ATP2A2-211ENST00000552636 IFT140Q96RY7 1462 aa22.24■■□□□ 1.15
ATP2A2-211ENST00000552636 CUX1P39880 1505 aa22.15■■□□□ 1.14
ATP2A2-211ENST00000552636 POLA1P09884 1462 aaPredicted RBP22.15■■□□□ 1.14
ATP2A2-211ENST00000552636 SOGA1O94964 1423 aa22.09■■□□□ 1.13
ATP2A2-211ENST00000552636 FGD5Q6ZNL6 1462 aa22.09■■□□□ 1.13
ATP2A2-211ENST00000552636 WRNQ14191 1432 aaPredicted RBP eCLIP22.08■■□□□ 1.13
ATP2A2-211ENST00000552636 TARBP1Q13395 1621 aaKnown RBP22.06■■□□□ 1.12
ATP2A2-211ENST00000552636 ZNF608Q9ULD9 1512 aaPredicted RBP22.05■■□□□ 1.12
ATP2A2-211ENST00000552636 RAD54L2Q9Y4B4 1467 aa22.02■■□□□ 1.12
ATP2A2-211ENST00000552636 WDR97A6NE52 1622 aa21.98■■□□□ 1.11
ATP2A2-211ENST00000552636 TOP2BQ02880 1626 aa21.98■■□□□ 1.11
ATP2A2-211ENST00000552636 AQRO60306 1485 aaKnown RBP eCLIP21.96■■□□□ 1.111e-8■■■■■ 60.2
ATP2A2-211ENST00000552636 EIF4G3O43432 1585 aaKnown RBP21.95■■□□□ 1.11
ATP2A2-211ENST00000552636 BIVM-ERCC5R4GMW8 1640 aa21.95■■□□□ 1.1
ATP2A2-211ENST00000552636 TDRD9Q8NDG6 1382 aaKnown RBP21.93■■□□□ 1.1
ATP2A2-211ENST00000552636 SYNJ1O43426 1573 aa21.92■■□□□ 1.1
ATP2A2-211ENST00000552636 ABCA10Q8WWZ4 1543 aa21.92■■□□□ 1.1
ATP2A2-211ENST00000552636 OSCARQ8IYS5 282 aa21.87■■□□□ 1.09
ATP2A2-211ENST00000552636 GRIN2BQ13224 1484 aa21.84■■□□□ 1.09
ATP2A2-211ENST00000552636 GAPVD1Q14C86 1478 aa21.83■■□□□ 1.09
ATP2A2-211ENST00000552636 MAGI1Q96QZ7 1491 aaPredicted RBP21.79■■□□□ 1.08
ATP2A2-211ENST00000552636 ABCA5Q8WWZ7 1642 aa21.76■■□□□ 1.07
ATP2A2-211ENST00000552636 SNAPC4Q5SXM2 1469 aa21.76■■□□□ 1.07
ATP2A2-211ENST00000552636 FBLN2P98095 1184 aa21.72■■□□□ 1.07
ATP2A2-211ENST00000552636 CHMP7Q8WUX9 453 aaPredicted RBP21.72■■□□□ 1.07
ATP2A2-211ENST00000552636 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
ATP2A2-211ENST00000552636 PBRM1Q86U86 1689 aa21.67■■□□□ 1.06
ATP2A2-211ENST00000552636 ERICH3Q5RHP9 1530 aa21.66■■□□□ 1.06
ATP2A2-211ENST00000552636 KIF27Q86VH2 1401 aa21.64■■□□□ 1.06
ATP2A2-211ENST00000552636 CHD1O14646 1710 aa21.62■■□□□ 1.05
ATP2A2-211ENST00000552636 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
ATP2A2-211ENST00000552636 TRIM41Q8WV44 630 aa21.59■■□□□ 1.05
ATP2A2-211ENST00000552636 ADAMTS12P58397 1594 aa21.56■■□□□ 1.04
ATP2A2-211ENST00000552636 GRIN2AQ12879 1464 aa21.53■■□□□ 1.04
ATP2A2-211ENST00000552636 IGF1RP08069 1367 aa21.53■■□□□ 1.04
ATP2A2-211ENST00000552636 CLASP1Q7Z460 1538 aa21.47■■□□□ 1.03
ATP2A2-211ENST00000552636 NUP160Q12769 1436 aa21.46■■□□□ 1.03
ATP2A2-211ENST00000552636 CUL7Q14999 1698 aa21.44■■□□□ 1.02
ATP2A2-211ENST00000552636 ARHGEF11O15085 1522 aa21.43■■□□□ 1.02
ATP2A2-211ENST00000552636 CARMIL1Q5VZK9 1371 aa21.42■■□□□ 1.02
ATP2A2-211ENST00000552636 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
ATP2A2-211ENST00000552636 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
ATP2A2-211ENST00000552636 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
ATP2A2-211ENST00000552636 CEP170Q5SW79 1584 aa21.37■■□□□ 1.01
ATP2A2-211ENST00000552636 RUSC2Q8N2Y8 1516 aa21.32■■□□□ 1
ATP2A2-211ENST00000552636 CHIC1Q5VXU3 224 aa21.3■■□□□ 1
ATP2A2-211ENST00000552636 EEA1Q15075 1411 aa21.29■■□□□ 1
ATP2A2-211ENST00000552636 RAPGEF2Q9Y4G8 1499 aa21.28■■□□□ 1
ATP2A2-211ENST00000552636 KIAA0586Q9BVV6 1533 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms