RNA–Protein interactions for RNA: ENST00000473815.1

LRRFIP1-209, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-209ENST00000473815 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
LRRFIP1-209ENST00000473815 ABCC9O60706 1549 aa30.7■■■□□ 2.51
LRRFIP1-209ENST00000473815 CCDC180Q9P1Z9 1646 aa30.54■■■□□ 2.48
LRRFIP1-209ENST00000473815 RB1CC1Q8TDY2 1594 aa29.15■■■□□ 2.26
LRRFIP1-209ENST00000473815 DNAJC5BQ9UF47 199 aa28.88■■■□□ 2.21
LRRFIP1-209ENST00000473815 NACADO15069 1562 aa28.84■■■□□ 2.21
LRRFIP1-209ENST00000473815 UNC13AQ9UPW8 1703 aa28.65■■■□□ 2.18
LRRFIP1-209ENST00000473815 DCAF8L2P0C7V8 631 aa28.6■■■□□ 2.17
LRRFIP1-209ENST00000473815 PABPN1Q86U42 306 aaKnown RBP eCLIP28.45■■■□□ 2.14
LRRFIP1-209ENST00000473815 MYO15BQ96JP2 1530 aa28.28■■■□□ 2.12
LRRFIP1-209ENST00000473815 BICRAQ9NZM4 1560 aa28.25■■■□□ 2.11
LRRFIP1-209ENST00000473815 ZCCHC6Q5VYS8 1495 aaKnown RBP27.9■■■□□ 2.06
LRRFIP1-209ENST00000473815 SHROOM4Q9ULL8 1493 aa27.83■■■□□ 2.05
LRRFIP1-209ENST00000473815 DCAF1Q9Y4B6 1507 aa27.82■■■□□ 2.04
LRRFIP1-209ENST00000473815 SCRIBQ14160 1630 aa27.79■■■□□ 2.04
LRRFIP1-209ENST00000473815 CC2D2AQ9P2K1 1620 aa27.77■■■□□ 2.04
LRRFIP1-209ENST00000473815 CECR2Q9BXF3 1484 aa27.66■■■□□ 2.02
LRRFIP1-209ENST00000473815 EIF4G1Q04637 1599 aaKnown RBP27.61■■■□□ 2.01
LRRFIP1-209ENST00000473815 DNAJC5Q9H3Z4 198 aa26.76■■□□□ 1.87
LRRFIP1-209ENST00000473815 CUX2O14529 1486 aa26.57■■□□□ 1.84
LRRFIP1-209ENST00000473815 ERCC6Q03468 1493 aa26.57■■□□□ 1.84
LRRFIP1-209ENST00000473815 NCAPD3P42695 1498 aa26.53■■□□□ 1.84
LRRFIP1-209ENST00000473815 SMARCA4P51532 1647 aa26.45■■□□□ 1.82
LRRFIP1-209ENST00000473815 ATAD2BQ9ULI0 1458 aa26.44■■□□□ 1.82
LRRFIP1-209ENST00000473815 SMARCA2P51531 1590 aa26.44■■□□□ 1.82
LRRFIP1-209ENST00000473815 HMGXB3Q12766 1538 aa26.41■■□□□ 1.82
LRRFIP1-209ENST00000473815 NESP48681 1621 aa26.28■■□□□ 1.8
LRRFIP1-209ENST00000473815 BAZ1AQ9NRL2 1556 aaPredicted RBP26.25■■□□□ 1.79
LRRFIP1-209ENST00000473815 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
LRRFIP1-209ENST00000473815 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
LRRFIP1-209ENST00000473815 PEG3Q9GZU2 1588 aa26.13■■□□□ 1.77
LRRFIP1-209ENST00000473815 LAMC3Q9Y6N6 1575 aa26.11■■□□□ 1.77
LRRFIP1-209ENST00000473815 KIF21AQ7Z4S6 1674 aa26.1■■□□□ 1.77
LRRFIP1-209ENST00000473815 MROH2BQ7Z745 1585 aa25.99■■□□□ 1.75
LRRFIP1-209ENST00000473815 PDS5BQ9NTI5 1447 aa25.89■■□□□ 1.74
LRRFIP1-209ENST00000473815 WIZO95785 1651 aa25.76■■□□□ 1.71
LRRFIP1-209ENST00000473815 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
LRRFIP1-209ENST00000473815 CADPSQ9ULU8 1353 aa25.71■■□□□ 1.71
LRRFIP1-209ENST00000473815 WDR62O43379 1518 aa25.67■■□□□ 1.7
LRRFIP1-209ENST00000473815 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
LRRFIP1-209ENST00000473815 CEP164Q9UPV0 1460 aa25.59■■□□□ 1.69
LRRFIP1-209ENST00000473815 FANCD2Q9BXW9 1451 aa25.49■■□□□ 1.67
LRRFIP1-209ENST00000473815 PRDM2Q13029 1718 aa25.42■■□□□ 1.66
LRRFIP1-209ENST00000473815 CFTRP13569 1480 aa25.39■■□□□ 1.65
LRRFIP1-209ENST00000473815 TOP2AP11388 1531 aaKnown RBP25.37■■□□□ 1.65
LRRFIP1-209ENST00000473815 RSF1Q96T23 1441 aaPredicted RBP25.29■■□□□ 1.64
LRRFIP1-209ENST00000473815 URB2Q14146 1524 aaKnown RBP25.29■■□□□ 1.64
LRRFIP1-209ENST00000473815 OSCARQ8IYS5 282 aa25.24■■□□□ 1.63
LRRFIP1-209ENST00000473815 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
LRRFIP1-209ENST00000473815 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
LRRFIP1-209ENST00000473815 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
LRRFIP1-209ENST00000473815 IFT140Q96RY7 1462 aa25.03■■□□□ 1.6
LRRFIP1-209ENST00000473815 ZNF608Q9ULD9 1512 aaPredicted RBP25.02■■□□□ 1.6
LRRFIP1-209ENST00000473815 CCDC88BA6NC98 1476 aa25.01■■□□□ 1.59
LRRFIP1-209ENST00000473815 EIF4G3O43432 1585 aaKnown RBP24.98■■□□□ 1.59
LRRFIP1-209ENST00000473815 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
LRRFIP1-209ENST00000473815 CHD1O14646 1710 aa24.94■■□□□ 1.58
LRRFIP1-209ENST00000473815 ARHGEF11O15085 1522 aa24.92■■□□□ 1.58
LRRFIP1-209ENST00000473815 DNMBPQ6XZF7 1577 aa24.92■■□□□ 1.58
LRRFIP1-209ENST00000473815 ABCC8Q09428 1581 aa24.91■■□□□ 1.58
LRRFIP1-209ENST00000473815 TARBP1Q13395 1621 aaKnown RBP24.82■■□□□ 1.56
LRRFIP1-209ENST00000473815 AQRO60306 1485 aaKnown RBP eCLIP24.74■■□□□ 1.553e-7■■■□□ 16
LRRFIP1-209ENST00000473815 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.55
LRRFIP1-209ENST00000473815 CYB5RLQ6IPT4 315 aa24.69■■□□□ 1.54
LRRFIP1-209ENST00000473815 FBLN2P98095 1184 aa24.68■■□□□ 1.54
LRRFIP1-209ENST00000473815 ARAP1Q96P48 1450 aa24.64■■□□□ 1.53
LRRFIP1-209ENST00000473815 RAD54L2Q9Y4B4 1467 aa24.6■■□□□ 1.53
LRRFIP1-209ENST00000473815 WDR97A6NE52 1622 aa24.57■■□□□ 1.52
LRRFIP1-209ENST00000473815 TRHP20396 242 aaPredicted RBP24.57■■□□□ 1.52
LRRFIP1-209ENST00000473815 SOGA1O94964 1423 aa24.55■■□□□ 1.52
LRRFIP1-209ENST00000473815 SNAPC4Q5SXM2 1469 aa24.53■■□□□ 1.52
LRRFIP1-209ENST00000473815 TDRD9Q8NDG6 1382 aaKnown RBP24.53■■□□□ 1.52
LRRFIP1-209ENST00000473815 FGD5Q6ZNL6 1462 aa24.52■■□□□ 1.52
LRRFIP1-209ENST00000473815 SYNJ1O43426 1573 aa24.5■■□□□ 1.51
LRRFIP1-209ENST00000473815 CLASP1Q7Z460 1538 aa24.48■■□□□ 1.51
LRRFIP1-209ENST00000473815 PBRM1Q86U86 1689 aa24.48■■□□□ 1.51
LRRFIP1-209ENST00000473815 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
LRRFIP1-209ENST00000473815 CUX1P39880 1505 aa24.45■■□□□ 1.5
LRRFIP1-209ENST00000473815 CHMP7Q8WUX9 453 aaPredicted RBP24.42■■□□□ 1.5
LRRFIP1-209ENST00000473815 GRIN2BQ13224 1484 aa24.4■■□□□ 1.5
LRRFIP1-209ENST00000473815 SYNJ2O15056 1496 aa24.36■■□□□ 1.49
LRRFIP1-209ENST00000473815 GAPVD1Q14C86 1478 aa24.29■■□□□ 1.48
LRRFIP1-209ENST00000473815 ABCA5Q8WWZ7 1642 aa24.27■■□□□ 1.48
LRRFIP1-209ENST00000473815 ABCA10Q8WWZ4 1543 aa24.2■■□□□ 1.47
LRRFIP1-209ENST00000473815 ADAMTS12P58397 1594 aa24.11■■□□□ 1.45
LRRFIP1-209ENST00000473815 GRIN2AQ12879 1464 aa24.1■■□□□ 1.45
LRRFIP1-209ENST00000473815 AEBP2Q6ZN18 517 aaPredicted RBP24.09■■□□□ 1.45
LRRFIP1-209ENST00000473815 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.44
LRRFIP1-209ENST00000473815 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
LRRFIP1-209ENST00000473815 CEP170Q5SW79 1584 aa24.06■■□□□ 1.44
LRRFIP1-209ENST00000473815 WRNQ14191 1432 aaPredicted RBP eCLIP24.04■■□□□ 1.44
LRRFIP1-209ENST00000473815 TOP2BQ02880 1626 aa24.02■■□□□ 1.44
LRRFIP1-209ENST00000473815 SUPT5HO00267 1087 aaKnown RBP24.01■■□□□ 1.43
LRRFIP1-209ENST00000473815 SHROOM2Q13796 1616 aa24■■□□□ 1.43
LRRFIP1-209ENST00000473815 NUP160Q12769 1436 aa23.99■■□□□ 1.43
LRRFIP1-209ENST00000473815 KIF13AQ9H1H9 1805 aa23.96■■□□□ 1.43
LRRFIP1-209ENST00000473815 FHAD1B1AJZ9 1412 aa23.94■■□□□ 1.42
LRRFIP1-209ENST00000473815 ERICH3Q5RHP9 1530 aa23.93■■□□□ 1.42
LRRFIP1-209ENST00000473815 PRG4Q92954 1404 aaPredicted RBP23.8■■□□□ 1.4
LRRFIP1-209ENST00000473815 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms