RNA–Protein interactions for RNA: ENST00000586955.5

CC2D1A-203, Transcript of coiled-coil and C2 domain containing 1A, humanhuman

TSL 1 (best)

Gene CC2D1A, Length 2,743 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1A-203ENST00000586955 NISCHQ9Y2I1 1504 aa31.44■■■□□ 2.62
CC2D1A-203ENST00000586955 SHROOM4Q9ULL8 1493 aa27.63■■■□□ 2.01
CC2D1A-203ENST00000586955 SUPT5HO00267 1087 aaKnown RBP27.44■■□□□ 1.98
CC2D1A-203ENST00000586955 HRCP23327 699 aa27.3■■□□□ 1.96
CC2D1A-203ENST00000586955 MYO15BQ96JP2 1530 aa27.01■■□□□ 1.91
CC2D1A-203ENST00000586955 CHIC1Q5VXU3 224 aa26.92■■□□□ 1.9
CC2D1A-203ENST00000586955 PCGF6Q9BYE7 350 aa26.9■■□□□ 1.9
CC2D1A-203ENST00000586955 PPARGC1BQ86YN6 1023 aaKnown RBP26.78■■□□□ 1.88
CC2D1A-203ENST00000586955 ZCCHC6Q5VYS8 1495 aaKnown RBP26.71■■□□□ 1.87
CC2D1A-203ENST00000586955 CCDC180Q9P1Z9 1646 aa26.54■■□□□ 1.84
CC2D1A-203ENST00000586955 DCAF1Q9Y4B6 1507 aa26.33■■□□□ 1.81
CC2D1A-203ENST00000586955 LOC105371045A0A1W2PR82 267 aa26.29■■□□□ 1.8
CC2D1A-203ENST00000586955 DCAF8L2P0C7V8 631 aa26.23■■□□□ 1.79
CC2D1A-203ENST00000586955 TRIM26Q12899 539 aaPredicted RBP26.1■■□□□ 1.77
CC2D1A-203ENST00000586955 PELP1Q8IZL8 1130 aaKnown RBP25.83■■□□□ 1.73
CC2D1A-203ENST00000586955 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
CC2D1A-203ENST00000586955 SCAF1Q9H7N4 1312 aaKnown RBP25.68■■□□□ 1.7
CC2D1A-203ENST00000586955 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
CC2D1A-203ENST00000586955 FAM9AQ8IZU1 332 aaPredicted RBP25.37■■□□□ 1.65
CC2D1A-203ENST00000586955 ABCC9O60706 1549 aa25.31■■□□□ 1.64
CC2D1A-203ENST00000586955 EHMT2Q96KQ7 1210 aa25.25■■□□□ 1.63
CC2D1A-203ENST00000586955 RSF1Q96T23 1441 aaPredicted RBP25.24■■□□□ 1.63
CC2D1A-203ENST00000586955 ACIN1Q9UKV3 1341 aaKnown RBP25.13■■□□□ 1.61
CC2D1A-203ENST00000586955 NEUROD1Q13562 356 aa25.09■■□□□ 1.61
CC2D1A-203ENST00000586955 RB1CC1Q8TDY2 1594 aa25.07■■□□□ 1.6
CC2D1A-203ENST00000586955 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.04■■□□□ 1.6
CC2D1A-203ENST00000586955 CCER1Q8TC90 406 aaPredicted RBP24.96■■□□□ 1.59
CC2D1A-203ENST00000586955 SCRIBQ14160 1630 aa24.95■■□□□ 1.58
CC2D1A-203ENST00000586955 GTF3C3Q9Y5Q9 886 aa24.92■■□□□ 1.58
CC2D1A-203ENST00000586955 DIEXFQ68CQ4 756 aaKnown RBP24.86■■□□□ 1.57
CC2D1A-203ENST00000586955 CENPBP07199 599 aaPredicted RBP24.81■■□□□ 1.56
CC2D1A-203ENST00000586955 NACADO15069 1562 aa24.72■■□□□ 1.55
CC2D1A-203ENST00000586955 MYT1Q01538 1121 aa24.7■■□□□ 1.54
CC2D1A-203ENST00000586955 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
CC2D1A-203ENST00000586955 TTBK1Q5TCY1 1321 aaPredicted RBP24.59■■□□□ 1.53
CC2D1A-203ENST00000586955 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
CC2D1A-203ENST00000586955 WIZO95785 1651 aa24.46■■□□□ 1.51
CC2D1A-203ENST00000586955 ZNF316A6NFI3 1004 aaPredicted RBP24.45■■□□□ 1.5
CC2D1A-203ENST00000586955 WRNQ14191 1432 aaPredicted RBP eCLIP24.42■■□□□ 1.5
CC2D1A-203ENST00000586955 YTHDC1Q96MU7 727 aaKnown RBP24.42■■□□□ 1.5
CC2D1A-203ENST00000586955 CEP162Q5TB80 1403 aa24.34■■□□□ 1.49
CC2D1A-203ENST00000586955 EIF4G1Q04637 1599 aaKnown RBP24.33■■□□□ 1.49
CC2D1A-203ENST00000586955 MIER1Q8N108 512 aa24.28■■□□□ 1.48
CC2D1A-203ENST00000586955 CCDC88BA6NC98 1476 aa24.26■■□□□ 1.47
CC2D1A-203ENST00000586955 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
CC2D1A-203ENST00000586955 ABCC8Q09428 1581 aa24.23■■□□□ 1.47
CC2D1A-203ENST00000586955 TNIKQ9UKE5 1360 aa24.21■■□□□ 1.47
CC2D1A-203ENST00000586955 SOGA1O94964 1423 aa24.18■■□□□ 1.46
CC2D1A-203ENST00000586955 UBTFP17480 764 aaKnown RBP24.13■■□□□ 1.45
CC2D1A-203ENST00000586955 UNC13AQ9UPW8 1703 aa24.09■■□□□ 1.45
CC2D1A-203ENST00000586955 CSRNP3Q8WYN3 585 aa24.08■■□□□ 1.45
CC2D1A-203ENST00000586955 HNRNPUL2Q1KMD3 747 aaKnown RBP24.07■■□□□ 1.44
CC2D1A-203ENST00000586955 RUSC2Q8N2Y8 1516 aa24.04■■□□□ 1.44
CC2D1A-203ENST00000586955 TOP2AP11388 1531 aaKnown RBP23.97■■□□□ 1.43
CC2D1A-203ENST00000586955 EEA1Q15075 1411 aa23.95■■□□□ 1.43
CC2D1A-203ENST00000586955 SMARCA2P51531 1590 aa23.92■■□□□ 1.42
CC2D1A-203ENST00000586955 GOLGA3Q08378 1498 aa23.91■■□□□ 1.42
CC2D1A-203ENST00000586955 BICRAQ9NZM4 1560 aa23.84■■□□□ 1.41
CC2D1A-203ENST00000586955 SUPT16HQ9Y5B9 1047 aaKnown RBP23.78■■□□□ 1.4
CC2D1A-203ENST00000586955 SMARCA4P51532 1647 aa23.78■■□□□ 1.4
CC2D1A-203ENST00000586955 CLIP1P30622 1438 aa23.73■■□□□ 1.39
CC2D1A-203ENST00000586955 CLSPNQ9HAW4 1339 aa23.69■■□□□ 1.38
CC2D1A-203ENST00000586955 APLP2Q06481 763 aa23.69■■□□□ 1.38
CC2D1A-203ENST00000586955 CEP164Q9UPV0 1460 aa23.69■■□□□ 1.38
CC2D1A-203ENST00000586955 VPS8Q8N3P4 1428 aa23.68■■□□□ 1.38
CC2D1A-203ENST00000586955 RANGAP1P46060 587 aaPredicted RBP23.61■■□□□ 1.37
CC2D1A-203ENST00000586955 TSHZ2Q9NRE2 1034 aa23.61■■□□□ 1.37
CC2D1A-203ENST00000586955 KIF21BO75037 1637 aa23.61■■□□□ 1.37
CC2D1A-203ENST00000586955 PABPN1Q86U42 306 aaKnown RBP eCLIP23.58■■□□□ 1.372e-6■■■■□ 20.2
CC2D1A-203ENST00000586955 DHX57Q6P158 1386 aaKnown RBP23.58■■□□□ 1.36
CC2D1A-203ENST00000586955 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
CC2D1A-203ENST00000586955 RAPGEF2Q9Y4G8 1499 aa23.51■■□□□ 1.35
CC2D1A-203ENST00000586955 ANP32EQ9BTT0 268 aa23.49■■□□□ 1.35
CC2D1A-203ENST00000586955 BAZ1BQ9UIG0 1483 aaKnown RBP23.47■■□□□ 1.35
CC2D1A-203ENST00000586955 KCNH8Q96L42 1107 aa23.4■■□□□ 1.34
CC2D1A-203ENST00000586955 KANK4Q5T7N3 995 aaPredicted RBP23.37■■□□□ 1.33
CC2D1A-203ENST00000586955 PEG3Q9GZU2 1588 aa23.33■■□□□ 1.33
CC2D1A-203ENST00000586955 BCANQ96GW7 911 aa23.32■■□□□ 1.32
CC2D1A-203ENST00000586955 ARAP1Q96P48 1450 aa23.24■■□□□ 1.31
CC2D1A-203ENST00000586955 FKBP8Q14318 412 aa23.23■■□□□ 1.31
CC2D1A-203ENST00000586955 BCL11AQ9H165 835 aa23.23■■□□□ 1.31
CC2D1A-203ENST00000586955 RRBP1Q9P2E9 1410 aaKnown RBP23.23■■□□□ 1.31
CC2D1A-203ENST00000586955 ITGAEP38570 1179 aa23.19■■□□□ 1.3
CC2D1A-203ENST00000586955 CUX2O14529 1486 aa23.17■■□□□ 1.3
CC2D1A-203ENST00000586955 CCNB3Q8WWL7 1395 aa23.14■■□□□ 1.29
CC2D1A-203ENST00000586955 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
CC2D1A-203ENST00000586955 DDX10Q13206 875 aaKnown RBP23.11■■□□□ 1.29
CC2D1A-203ENST00000586955 ERICH3Q5RHP9 1530 aa23.1■■□□□ 1.29
CC2D1A-203ENST00000586955 TOP2BQ02880 1626 aa23.1■■□□□ 1.29
CC2D1A-203ENST00000586955 RBM19Q9Y4C8 960 aaKnown RBP23.09■■□□□ 1.29
CC2D1A-203ENST00000586955 RAB3GAP2Q9H2M9 1393 aa23.07■■□□□ 1.28
CC2D1A-203ENST00000586955 MAPKBP1O60336 1514 aa23.05■■□□□ 1.28
CC2D1A-203ENST00000586955 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
CC2D1A-203ENST00000586955 NEFLP07196 543 aa23■■□□□ 1.27
CC2D1A-203ENST00000586955 SIN3AQ96ST3 1273 aa22.98■■□□□ 1.27
CC2D1A-203ENST00000586955 PPP1R15AO75807 674 aaPredicted RBP22.98■■□□□ 1.27
CC2D1A-203ENST00000586955 TRIM52Q96A61 297 aa22.97■■□□□ 1.27
CC2D1A-203ENST00000586955 WDR97A6NE52 1622 aa22.97■■□□□ 1.27
CC2D1A-203ENST00000586955 BIVM-ERCC5R4GMW8 1640 aa22.95■■□□□ 1.26
CC2D1A-203ENST00000586955 HIRIP3Q9BW71 556 aaPredicted RBP22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms