RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 NISCHQ9Y2I1 1504 aa31.5■■■□□ 2.63
SNORD88B-201ENST00000408454 CCDC180Q9P1Z9 1646 aa28.31■■■□□ 2.12
SNORD88B-201ENST00000408454 ABCC9O60706 1549 aa27.88■■■□□ 2.05
SNORD88B-201ENST00000408454 RB1CC1Q8TDY2 1594 aa26.87■■□□□ 1.89
SNORD88B-201ENST00000408454 NACADO15069 1562 aa26.74■■□□□ 1.87
SNORD88B-201ENST00000408454 MYO15BQ96JP2 1530 aa26.49■■□□□ 1.83
SNORD88B-201ENST00000408454 DCAF8L2P0C7V8 631 aa26.49■■□□□ 1.83
SNORD88B-201ENST00000408454 DCAF1Q9Y4B6 1507 aa26.19■■□□□ 1.78
SNORD88B-201ENST00000408454 ZCCHC6Q5VYS8 1495 aaKnown RBP26.16■■□□□ 1.78
SNORD88B-201ENST00000408454 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
SNORD88B-201ENST00000408454 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
SNORD88B-201ENST00000408454 PABPN1Q86U42 306 aaKnown RBP eCLIP25.91■■□□□ 1.74
SNORD88B-201ENST00000408454 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
SNORD88B-201ENST00000408454 DNAJC5BQ9UF47 199 aa25.71■■□□□ 1.71
SNORD88B-201ENST00000408454 SCRIBQ14160 1630 aa25.61■■□□□ 1.69
SNORD88B-201ENST00000408454 EIF4G1Q04637 1599 aaKnown RBP25.27■■□□□ 1.64
SNORD88B-201ENST00000408454 CC2D2AQ9P2K1 1620 aa25.23■■□□□ 1.63
SNORD88B-201ENST00000408454 CECR2Q9BXF3 1484 aa25.2■■□□□ 1.62
SNORD88B-201ENST00000408454 SMARCA2P51531 1590 aa24.6■■□□□ 1.53
SNORD88B-201ENST00000408454 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
SNORD88B-201ENST00000408454 BAZ1AQ9NRL2 1556 aaPredicted RBP24.56■■□□□ 1.52
SNORD88B-201ENST00000408454 SMARCA4P51532 1647 aa24.52■■□□□ 1.52
SNORD88B-201ENST00000408454 ATAD2BQ9ULI0 1458 aa24.49■■□□□ 1.51
SNORD88B-201ENST00000408454 HMGXB3Q12766 1538 aa24.49■■□□□ 1.51
SNORD88B-201ENST00000408454 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
SNORD88B-201ENST00000408454 PEG3Q9GZU2 1588 aa24.34■■□□□ 1.49
SNORD88B-201ENST00000408454 ERCC6Q03468 1493 aa24.27■■□□□ 1.48
SNORD88B-201ENST00000408454 CUX2O14529 1486 aa24.18■■□□□ 1.46
SNORD88B-201ENST00000408454 MROH2BQ7Z745 1585 aa24.15■■□□□ 1.46
SNORD88B-201ENST00000408454 LAMC3Q9Y6N6 1575 aa24.08■■□□□ 1.45
SNORD88B-201ENST00000408454 PDS5BQ9NTI5 1447 aa24■■□□□ 1.43
SNORD88B-201ENST00000408454 NESP48681 1621 aa23.91■■□□□ 1.42
SNORD88B-201ENST00000408454 CADPSQ9ULU8 1353 aa23.87■■□□□ 1.41
SNORD88B-201ENST00000408454 WIZO95785 1651 aa23.85■■□□□ 1.41
SNORD88B-201ENST00000408454 RSF1Q96T23 1441 aaPredicted RBP23.78■■□□□ 1.4
SNORD88B-201ENST00000408454 DNAJC5Q9H3Z4 198 aa23.77■■□□□ 1.4
SNORD88B-201ENST00000408454 TOP2AP11388 1531 aaKnown RBP23.74■■□□□ 1.39
SNORD88B-201ENST00000408454 THOC2Q8NI27 1593 aaKnown RBP23.74■■□□□ 1.39
SNORD88B-201ENST00000408454 KIF21AQ7Z4S6 1674 aa23.68■■□□□ 1.38
SNORD88B-201ENST00000408454 MRC2Q9UBG0 1479 aa23.67■■□□□ 1.38
SNORD88B-201ENST00000408454 CEP164Q9UPV0 1460 aa23.66■■□□□ 1.38
SNORD88B-201ENST00000408454 CFTRP13569 1480 aa23.62■■□□□ 1.37
SNORD88B-201ENST00000408454 FANCD2Q9BXW9 1451 aa23.57■■□□□ 1.36
SNORD88B-201ENST00000408454 WDR62O43379 1518 aa23.56■■□□□ 1.36
SNORD88B-201ENST00000408454 PRDM2Q13029 1718 aa23.42■■□□□ 1.34
SNORD88B-201ENST00000408454 CCDC88BA6NC98 1476 aa23.36■■□□□ 1.33
SNORD88B-201ENST00000408454 ABCC8Q09428 1581 aa23.34■■□□□ 1.33
SNORD88B-201ENST00000408454 URB2Q14146 1524 aaKnown RBP23.24■■□□□ 1.31
SNORD88B-201ENST00000408454 IFT140Q96RY7 1462 aa23.18■■□□□ 1.3
SNORD88B-201ENST00000408454 DNMBPQ6XZF7 1577 aa23.11■■□□□ 1.29
SNORD88B-201ENST00000408454 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
SNORD88B-201ENST00000408454 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
SNORD88B-201ENST00000408454 WDR97A6NE52 1622 aa22.93■■□□□ 1.26
SNORD88B-201ENST00000408454 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
SNORD88B-201ENST00000408454 POLA1P09884 1462 aaPredicted RBP22.88■■□□□ 1.25
SNORD88B-201ENST00000408454 EIF4G3O43432 1585 aaKnown RBP22.88■■□□□ 1.25
SNORD88B-201ENST00000408454 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
SNORD88B-201ENST00000408454 SOGA1O94964 1423 aa22.84■■□□□ 1.25
SNORD88B-201ENST00000408454 TARBP1Q13395 1621 aaKnown RBP22.83■■□□□ 1.25
SNORD88B-201ENST00000408454 TRIM41Q8WV44 630 aa22.78■■□□□ 1.24
SNORD88B-201ENST00000408454 FGD5Q6ZNL6 1462 aa22.77■■□□□ 1.24
SNORD88B-201ENST00000408454 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.231e-12■■■■□ 22
SNORD88B-201ENST00000408454 CUX1P39880 1505 aa22.71■■□□□ 1.23
SNORD88B-201ENST00000408454 MAGI1Q96QZ7 1491 aaPredicted RBP22.69■■□□□ 1.22
SNORD88B-201ENST00000408454 GRIN2BQ13224 1484 aa22.68■■□□□ 1.22
SNORD88B-201ENST00000408454 FBLN2P98095 1184 aa22.68■■□□□ 1.22
SNORD88B-201ENST00000408454 RAD54L2Q9Y4B4 1467 aa22.67■■□□□ 1.22
SNORD88B-201ENST00000408454 TDRD9Q8NDG6 1382 aaKnown RBP22.66■■□□□ 1.22
SNORD88B-201ENST00000408454 CHMP7Q8WUX9 453 aaPredicted RBP22.63■■□□□ 1.21
SNORD88B-201ENST00000408454 WRNQ14191 1432 aaPredicted RBP eCLIP22.63■■□□□ 1.21
SNORD88B-201ENST00000408454 CHD1O14646 1710 aa22.6■■□□□ 1.21
SNORD88B-201ENST00000408454 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
SNORD88B-201ENST00000408454 ARHGEF11O15085 1522 aa22.59■■□□□ 1.21
SNORD88B-201ENST00000408454 SYNJ1O43426 1573 aa22.59■■□□□ 1.21
SNORD88B-201ENST00000408454 ABCA10Q8WWZ4 1543 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 RIMBP3CA6NJZ7 1639 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 RIMBP3BA6NNM3 1639 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 RIMBP3Q9UFD9 1639 aa22.58■■□□□ 1.21
SNORD88B-201ENST00000408454 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
SNORD88B-201ENST00000408454 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
SNORD88B-201ENST00000408454 TOP2BQ02880 1626 aa22.52■■□□□ 1.2
SNORD88B-201ENST00000408454 BIVM-ERCC5R4GMW8 1640 aa22.49■■□□□ 1.19
SNORD88B-201ENST00000408454 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
SNORD88B-201ENST00000408454 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
SNORD88B-201ENST00000408454 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
SNORD88B-201ENST00000408454 CYB5RLQ6IPT4 315 aa22.4■■□□□ 1.18
SNORD88B-201ENST00000408454 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
SNORD88B-201ENST00000408454 FHAD1B1AJZ9 1412 aa22.35■■□□□ 1.17
SNORD88B-201ENST00000408454 GRIN2AQ12879 1464 aa22.33■■□□□ 1.16
SNORD88B-201ENST00000408454 ARAP1Q96P48 1450 aa22.32■■□□□ 1.16
SNORD88B-201ENST00000408454 ADAMTS12P58397 1594 aa22.3■■□□□ 1.16
SNORD88B-201ENST00000408454 NUP160Q12769 1436 aa22.23■■□□□ 1.15
SNORD88B-201ENST00000408454 KIF27Q86VH2 1401 aa22.21■■□□□ 1.15
SNORD88B-201ENST00000408454 TRHP20396 242 aaPredicted RBP22.19■■□□□ 1.14
SNORD88B-201ENST00000408454 CEP170Q5SW79 1584 aa22.12■■□□□ 1.13
SNORD88B-201ENST00000408454 CUL7Q14999 1698 aa22.11■■□□□ 1.13
SNORD88B-201ENST00000408454 SHROOM2Q13796 1616 aa22.07■■□□□ 1.12
SNORD88B-201ENST00000408454 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
SNORD88B-201ENST00000408454 PRG4Q92954 1404 aaPredicted RBP21.99■■□□□ 1.11
SNORD88B-201ENST00000408454 IGF1RP08069 1367 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms