RNA–Protein interactions for RNA: ENST00000589606.5

CC2D1A-208, Transcript of coiled-coil and C2 domain containing 1A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CC2D1A, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CC2D1A-208ENST00000589606 NISCHQ9Y2I1 1504 aa28.7■■■□□ 2.18
CC2D1A-208ENST00000589606 DCAF8L2P0C7V8 631 aa25.17■■□□□ 1.62
CC2D1A-208ENST00000589606 SHROOM4Q9ULL8 1493 aa24.92■■□□□ 1.58
CC2D1A-208ENST00000589606 CCDC180Q9P1Z9 1646 aa24.22■■□□□ 1.47
CC2D1A-208ENST00000589606 SUPT5HO00267 1087 aaKnown RBP24.21■■□□□ 1.47
CC2D1A-208ENST00000589606 ZCCHC6Q5VYS8 1495 aaKnown RBP24.04■■□□□ 1.44
CC2D1A-208ENST00000589606 ABCC9O60706 1549 aa23.92■■□□□ 1.42
CC2D1A-208ENST00000589606 SCRIBQ14160 1630 aa23.26■■□□□ 1.31
CC2D1A-208ENST00000589606 DCAF1Q9Y4B6 1507 aa23.14■■□□□ 1.3
CC2D1A-208ENST00000589606 PABPN1Q86U42 306 aaKnown RBP eCLIP23.06■■□□□ 1.282e-6■■■■□ 20.2
CC2D1A-208ENST00000589606 CHIC1Q5VXU3 224 aa22.8■■□□□ 1.24
CC2D1A-208ENST00000589606 NACADO15069 1562 aa22.8■■□□□ 1.24
CC2D1A-208ENST00000589606 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
CC2D1A-208ENST00000589606 EHMT2Q96KQ7 1210 aa22.69■■□□□ 1.22
CC2D1A-208ENST00000589606 RB1CC1Q8TDY2 1594 aa22.67■■□□□ 1.22
CC2D1A-208ENST00000589606 RSF1Q96T23 1441 aaPredicted RBP22.65■■□□□ 1.22
CC2D1A-208ENST00000589606 MYO15BQ96JP2 1530 aa22.63■■□□□ 1.21
CC2D1A-208ENST00000589606 FAM9AQ8IZU1 332 aaPredicted RBP22.54■■□□□ 1.2
CC2D1A-208ENST00000589606 LOC105371045A0A1W2PR82 267 aa22.45■■□□□ 1.18
CC2D1A-208ENST00000589606 MROH2BQ7Z745 1585 aa22.44■■□□□ 1.18
CC2D1A-208ENST00000589606 TRIM41Q8WV44 630 aa22.36■■□□□ 1.17
CC2D1A-208ENST00000589606 WIZO95785 1651 aa22.23■■□□□ 1.15
CC2D1A-208ENST00000589606 UNC13AQ9UPW8 1703 aa22.1■■□□□ 1.13
CC2D1A-208ENST00000589606 BICRAQ9NZM4 1560 aa22.04■■□□□ 1.12
CC2D1A-208ENST00000589606 BAZ1AQ9NRL2 1556 aaPredicted RBP22.04■■□□□ 1.12
CC2D1A-208ENST00000589606 SMARCA4P51532 1647 aa21.91■■□□□ 1.1
CC2D1A-208ENST00000589606 CCDC88BA6NC98 1476 aa21.85■■□□□ 1.09
CC2D1A-208ENST00000589606 PCGF6Q9BYE7 350 aa21.8■■□□□ 1.08
CC2D1A-208ENST00000589606 PPARGC1BQ86YN6 1023 aaKnown RBP21.8■■□□□ 1.08
CC2D1A-208ENST00000589606 ABCC8Q09428 1581 aa21.71■■□□□ 1.07
CC2D1A-208ENST00000589606 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
CC2D1A-208ENST00000589606 TTBK1Q5TCY1 1321 aaPredicted RBP21.7■■□□□ 1.06
CC2D1A-208ENST00000589606 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
CC2D1A-208ENST00000589606 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
CC2D1A-208ENST00000589606 BAZ1BQ9UIG0 1483 aaKnown RBP21.66■■□□□ 1.06
CC2D1A-208ENST00000589606 SMARCA2P51531 1590 aa21.6■■□□□ 1.05
CC2D1A-208ENST00000589606 UBTFP17480 764 aaKnown RBP21.53■■□□□ 1.04
CC2D1A-208ENST00000589606 DNAJC5BQ9UF47 199 aa21.49■■□□□ 1.03
CC2D1A-208ENST00000589606 SOGA1O94964 1423 aa21.47■■□□□ 1.03
CC2D1A-208ENST00000589606 EIF4G1Q04637 1599 aaKnown RBP21.47■■□□□ 1.03
CC2D1A-208ENST00000589606 RUSC2Q8N2Y8 1516 aa21.4■■□□□ 1.02
CC2D1A-208ENST00000589606 WRNQ14191 1432 aaPredicted RBP eCLIP21.36■■□□□ 1.01
CC2D1A-208ENST00000589606 CSRNP3Q8WYN3 585 aa21.35■■□□□ 1.01
CC2D1A-208ENST00000589606 NCAPD3P42695 1498 aa21.25■□□□□ 0.99
CC2D1A-208ENST00000589606 PEG3Q9GZU2 1588 aa21.24■□□□□ 0.99
CC2D1A-208ENST00000589606 TRIM26Q12899 539 aaPredicted RBP21.15■□□□□ 0.98
CC2D1A-208ENST00000589606 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
CC2D1A-208ENST00000589606 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
CC2D1A-208ENST00000589606 NESP48681 1621 aa21.04■□□□□ 0.96
CC2D1A-208ENST00000589606 CADPSQ9ULU8 1353 aa21.02■□□□□ 0.95
CC2D1A-208ENST00000589606 HMGXB3Q12766 1538 aa20.99■□□□□ 0.95
CC2D1A-208ENST00000589606 CEP162Q5TB80 1403 aa20.97■□□□□ 0.95
CC2D1A-208ENST00000589606 HRCP23327 699 aa20.96■□□□□ 0.95
CC2D1A-208ENST00000589606 CFTRP13569 1480 aa20.94■□□□□ 0.94
CC2D1A-208ENST00000589606 P3H3Q8IVL6 736 aa20.89■□□□□ 0.94
CC2D1A-208ENST00000589606 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
CC2D1A-208ENST00000589606 ATP1B4Q9UN42 357 aaPredicted RBP20.88■□□□□ 0.93
CC2D1A-208ENST00000589606 CUX1P39880 1505 aa20.87■□□□□ 0.93
CC2D1A-208ENST00000589606 TNIKQ9UKE5 1360 aa20.84■□□□□ 0.93
CC2D1A-208ENST00000589606 APLP2Q06481 763 aa20.83■□□□□ 0.93
CC2D1A-208ENST00000589606 GOLGA3Q08378 1498 aa20.83■□□□□ 0.92
CC2D1A-208ENST00000589606 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.82■□□□□ 0.92
CC2D1A-208ENST00000589606 FANCD2Q9BXW9 1451 aa20.8■□□□□ 0.92
CC2D1A-208ENST00000589606 EEA1Q15075 1411 aa20.8■□□□□ 0.92
CC2D1A-208ENST00000589606 CUX2O14529 1486 aa20.79■□□□□ 0.92
CC2D1A-208ENST00000589606 HNRNPUL2Q1KMD3 747 aaKnown RBP20.76■□□□□ 0.91
CC2D1A-208ENST00000589606 CLIP1P30622 1438 aa20.76■□□□□ 0.91
CC2D1A-208ENST00000589606 RAD54L2Q9Y4B4 1467 aa20.75■□□□□ 0.91
CC2D1A-208ENST00000589606 CEP164Q9UPV0 1460 aa20.75■□□□□ 0.91
CC2D1A-208ENST00000589606 KIF27Q86VH2 1401 aa20.74■□□□□ 0.91
CC2D1A-208ENST00000589606 TOP2BQ02880 1626 aa20.73■□□□□ 0.91
CC2D1A-208ENST00000589606 TDRD9Q8NDG6 1382 aaKnown RBP20.71■□□□□ 0.91
CC2D1A-208ENST00000589606 FGD5Q6ZNL6 1462 aa20.7■□□□□ 0.9
CC2D1A-208ENST00000589606 CCER1Q8TC90 406 aaPredicted RBP20.66■□□□□ 0.9
CC2D1A-208ENST00000589606 IGF1RP08069 1367 aa20.63■□□□□ 0.89
CC2D1A-208ENST00000589606 ITGAEP38570 1179 aa20.63■□□□□ 0.89
CC2D1A-208ENST00000589606 CARMIL1Q5VZK9 1371 aa20.6■□□□□ 0.89
CC2D1A-208ENST00000589606 ARID3CA6NKF2 412 aa20.58■□□□□ 0.88
CC2D1A-208ENST00000589606 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
CC2D1A-208ENST00000589606 FBLN2P98095 1184 aa20.54■□□□□ 0.88
CC2D1A-208ENST00000589606 PDS5BQ9NTI5 1447 aa20.53■□□□□ 0.88
CC2D1A-208ENST00000589606 BIVM-ERCC5R4GMW8 1640 aa20.51■□□□□ 0.87
CC2D1A-208ENST00000589606 POLA1P09884 1462 aaPredicted RBP20.51■□□□□ 0.87
CC2D1A-208ENST00000589606 TOPBP1Q92547 1522 aa20.51■□□□□ 0.87
CC2D1A-208ENST00000589606 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
CC2D1A-208ENST00000589606 URB2Q14146 1524 aaKnown RBP20.47■□□□□ 0.87
CC2D1A-208ENST00000589606 PELP1Q8IZL8 1130 aaKnown RBP20.45■□□□□ 0.86
CC2D1A-208ENST00000589606 KIF21BO75037 1637 aa20.43■□□□□ 0.86
CC2D1A-208ENST00000589606 VPS8Q8N3P4 1428 aa20.41■□□□□ 0.86
CC2D1A-208ENST00000589606 AQRO60306 1485 aaKnown RBP eCLIP20.4■□□□□ 0.862e-7■■■■■ 31.9
CC2D1A-208ENST00000589606 ERCC6Q03468 1493 aa20.39■□□□□ 0.85
CC2D1A-208ENST00000589606 ARAP1Q96P48 1450 aa20.38■□□□□ 0.85
CC2D1A-208ENST00000589606 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.85
CC2D1A-208ENST00000589606 LAMC3Q9Y6N6 1575 aa20.32■□□□□ 0.84
CC2D1A-208ENST00000589606 FHOD3Q2V2M9 1422 aa20.29■□□□□ 0.84
CC2D1A-208ENST00000589606 FAM50AQ14320 339 aaKnown RBP20.29■□□□□ 0.84
CC2D1A-208ENST00000589606 ARHGAP35Q9NRY4 1499 aa20.28■□□□□ 0.84
CC2D1A-208ENST00000589606 GAPVD1Q14C86 1478 aa20.27■□□□□ 0.84
CC2D1A-208ENST00000589606 KIF21AQ7Z4S6 1674 aa20.26■□□□□ 0.83
CC2D1A-208ENST00000589606 ERICH3Q5RHP9 1530 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms