Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.638e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-217ENST00000601938 782 ntAPPRIS ALT2 TSL 511.09□□□□□ -0.638e-8■■□□□ 13.4
SRSF1Q07955 NUP85-202ENST00000449421 1287 ntTSL 210.57□□□□□ -0.727e-7■■□□□ 13.4
SRSF1Q07955 AP001065.1-201ENST00000449713 912 ntTSL 3 BASIC10.57□□□□□ -0.728e-8■■□□□ 13.4
SRSF1Q07955 BABAM1-212ENST00000599474 731 ntAPPRIS ALT2 TSL 29.94□□□□□ -0.828e-8■■□□□ 13.4
SRSF1Q07955 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC8.7□□□□□ -1.028e-8■■□□□ 13.4
SRSF1Q07955 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.028e-8■■□□□ 13.4
SRSF1Q07955 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.028e-8■■□□□ 13.4
SRSF1Q07955 SERGEF-215ENST00000530951 408 ntTSL 38.49□□□□□ -1.058e-8■■□□□ 13.4
SRSF1Q07955 MAN2A2-206ENST00000558290 1049 ntTSL 517.31■□□□□ 0.361e-6■■□□□ 13.4
SRSF1Q07955 MAN2A2-210ENST00000558853 624 ntTSL 315.97■□□□□ 0.151e-6■■□□□ 13.4
SRSF1Q07955 SON-208ENST00000455528 8394 ntTSL 1 (best)10.23□□□□□ -0.771e-6■■□□□ 13.4
SRSF1Q07955 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC9.48□□□□□ -0.891e-6■■□□□ 13.4
SRSF1Q07955 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.3□□□□□ -1.561e-6■■□□□ 13.4
SRSF1Q07955 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.5■□□□□ 0.234e-7■■□□□ 13.4
SRSF1Q07955 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.47■□□□□ 0.234e-7■■□□□ 13.4
SRSF1Q07955 ZFC3H1-201ENST00000378743 7285 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.774e-7■■□□□ 13.4
SRSF1Q07955 ZFC3H1-212ENST00000552994 7597 ntTSL 1 (best)10.23□□□□□ -0.774e-7■■□□□ 13.4
SRSF1Q07955 ZFC3H1-208ENST00000550712 571 ntTSL 45.53□□□□□ -1.524e-7■■□□□ 13.4
SRSF1Q07955 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.369e-7■■□□□ 13.4
SRSF1Q07955 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC12.8□□□□□ -0.369e-7■■□□□ 13.4
SRSF1Q07955 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC11.72□□□□□ -0.539e-7■■□□□ 13.4
SRSF1Q07955 INPPL1-206ENST00000538339 505 ntTSL 211.54□□□□□ -0.562e-6■■□□□ 13.4
SRSF1Q07955 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.439e-7■■□□□ 13.4
SRSF1Q07955 NPAS2-204ENST00000448812 774 ntTSL 511.4□□□□□ -0.589e-7■■□□□ 13.4
SRSF1Q07955 HERC2-201ENST00000261609 15337 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.441e-8■■□□□ 13.4
SRSF1Q07955 NOP56-216ENST00000492135 1143 ntTSL 1 (best)13.22□□□□□ -0.296e-7■■□□□ 13.4
SRSF1Q07955 NOP56-220ENST00000616692 2662 ntTSL 1 (best)13.18□□□□□ -0.36e-7■■□□□ 13.4
SRSF1Q07955 NOP56-206ENST00000466447 1094 ntTSL 211.35□□□□□ -0.596e-7■■□□□ 13.4
SRSF1Q07955 NOP56-215ENST00000490753 640 ntTSL 29.88□□□□□ -0.836e-7■■□□□ 13.4
SRSF1Q07955 NOP56-202ENST00000415272 1628 ntTSL 59.85□□□□□ -0.836e-7■■□□□ 13.4
SRSF1Q07955 NOP56-205ENST00000462630 859 ntTSL 29.58□□□□□ -0.886e-7■■□□□ 13.4
SRSF1Q07955 NOP56-211ENST00000471023 592 ntTSL 27.07□□□□□ -1.286e-7■■□□□ 13.4
SRSF1Q07955 NOP56-208ENST00000467857 735 ntTSL 26.95□□□□□ -1.36e-7■■□□□ 13.4
SRSF1Q07955 NOP56-212ENST00000480447 651 ntTSL 26.16□□□□□ -1.426e-7■■□□□ 13.4
SRSF1Q07955 FKBP10-205ENST00000487489 578 ntTSL 216.04■□□□□ 0.165e-8■■□□□ 13.4
SRSF1Q07955 RTN3-211ENST00000542238 735 ntTSL 315.37■□□□□ 0.052e-7■■□□□ 13.4
SRSF1Q07955 RTN3-214ENST00000545432 545 ntTSL 415.22■□□□□ 0.032e-7■■□□□ 13.4
SRSF1Q07955 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC12.74□□□□□ -0.372e-7■■□□□ 13.4
SRSF1Q07955 RTN3-213ENST00000543552 529 ntTSL 412.62□□□□□ -0.392e-7■■□□□ 13.4
SRSF1Q07955 RTN3-212ENST00000543123 712 ntTSL 212.62□□□□□ -0.392e-7■■□□□ 13.4
SRSF1Q07955 RTN3-207ENST00000536011 992 ntTSL 212.62□□□□□ -0.392e-7■■□□□ 13.4
SRSF1Q07955 RTN3-209ENST00000538995 814 ntTSL 210.88□□□□□ -0.672e-7■■□□□ 13.4
SRSF1Q07955 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC10.64□□□□□ -0.712e-7■■□□□ 13.4
SRSF1Q07955 RTN3-201ENST00000338850 493 ntTSL 29.5□□□□□ -0.892e-7■■□□□ 13.4
SRSF1Q07955 RTN3-203ENST00000341307 2524 ntTSL 2 BASIC9.42□□□□□ -0.92e-7■■□□□ 13.4
SRSF1Q07955 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC9.07□□□□□ -0.962e-7■■□□□ 13.4
SRSF1Q07955 RTN3-208ENST00000537981 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.062e-7■■□□□ 13.4
SRSF1Q07955 PUM1-223ENST00000532678 793 ntTSL 47.73□□□□□ -1.172e-7■■□□□ 13.4
SRSF1Q07955 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC7.1□□□□□ -1.272e-7■■□□□ 13.4
SRSF1Q07955 FDFT1-213ENST00000528729 570 ntTSL 36.22□□□□□ -1.412e-7■■□□□ 13.4
SRSF1Q07955 BCLAF1-209ENST00000529522 1093 ntTSL 26.51□□□□□ -1.371e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-211ENST00000529917 1336 ntTSL 1 (best)6.33□□□□□ -1.41e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-216ENST00000532384 3237 ntTSL 55.61□□□□□ -1.511e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-221ENST00000534762 744 ntTSL 35.18□□□□□ -1.581e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-217ENST00000533422 692 ntTSL 35.16□□□□□ -1.581e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.26□□□□□ -1.731e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.74□□□□□ -1.811e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.821e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.821e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-212ENST00000530429 3167 ntTSL 53.6□□□□□ -1.831e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-204ENST00000526228 572 ntTSL 33.48□□□□□ -1.851e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-219ENST00000534269 4239 ntTSL 1 (best)3.18□□□□□ -1.91e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.911e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-206ENST00000527613 5640 ntTSL 1 (best)2.52□□□□□ -2.011e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.35□□□□□ -2.031e-8■■□□□ 13.4
SRSF1Q07955 BCLAF1-224ENST00000640069 7719 ntTSL 51.28□□□□□ -2.211e-8■■□□□ 13.4
SRSF1Q07955 NELFCD-208ENST00000482747 1701 ntTSL 215.82■□□□□ 0.121e-9■■□□□ 13.4
SRSF1Q07955 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC12.47□□□□□ -0.411e-7■■□□□ 13.4
SRSF1Q07955 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC11.82□□□□□ -0.521e-7■■□□□ 13.4
SRSF1Q07955 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.521e-7■■□□□ 13.4
SRSF1Q07955 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC11.82□□□□□ -0.521e-7■■□□□ 13.4
SRSF1Q07955 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC11.67□□□□□ -0.541e-7■■□□□ 13.4
SRSF1Q07955 PAXX-207ENST00000493968 958 ntTSL 1 (best)19.04■□□□□ 0.644e-6■■□□□ 13.4
SRSF1Q07955 PAXX-205ENST00000483807 705 ntTSL 516.85■□□□□ 0.294e-6■■□□□ 13.4
SRSF1Q07955 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.24e-6■■□□□ 13.4
SRSF1Q07955 PAXX-208ENST00000498095 1077 ntTSL 515.99■□□□□ 0.154e-6■■□□□ 13.4
SRSF1Q07955 PAXX-203ENST00000467845 744 ntTSL 215.5■□□□□ 0.074e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-203ENST00000396830 1776 ntTSL 1 (best)14.78□□□□□ -0.044e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC14.3□□□□□ -0.124e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.184e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC13.71□□□□□ -0.214e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.254e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC13.21□□□□□ -0.294e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-209ENST00000487279 2786 ntTSL 1 (best)12.83□□□□□ -0.364e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-210ENST00000488007 3001 ntTSL 511.23□□□□□ -0.614e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-208ENST00000472558 2571 ntTSL 210.88□□□□□ -0.674e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-207ENST00000471408 2843 ntTSL 210.44□□□□□ -0.744e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-206ENST00000465801 2850 ntTSL 5 BASIC10.24□□□□□ -0.774e-6■■□□□ 13.4
SRSF1Q07955 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC9.66□□□□□ -0.864e-6■■□□□ 13.4
SRSF1Q07955 AARS-203ENST00000565361 839 ntTSL 510.62□□□□□ -0.717e-13■■□□□ 13.4
SRSF1Q07955 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC22.94■■□□□ 1.262e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-205ENST00000593431 582 ntTSL 317.85■□□□□ 0.452e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-215ENST00000598936 870 ntTSL 317.14■□□□□ 0.332e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.44■□□□□ 0.222e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-203ENST00000452439 1351 ntTSL 216.34■□□□□ 0.212e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-208ENST00000595881 2681 ntTSL 216.12■□□□□ 0.172e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-209ENST00000596147 383 ntTSL 315.62■□□□□ 0.092e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-214ENST00000598927 1616 ntTSL 515.51■□□□□ 0.072e-7■■□□□ 13.4
SRSF1Q07955 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -02e-7■■□□□ 13.4
Retrieved 100 of 14,836 protein–RNA pairs in 120.8 ms