RNA–Protein interactions for RNA: ENST00000550712.1

ZFC3H1-208, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 4

Gene ZFC3H1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-208ENST00000550712 AEBP2Q6ZN18 517 aaPredicted RBP27.18■■□□□ 1.94
ZFC3H1-208ENST00000550712 CHIC1Q5VXU3 224 aa26.55■■□□□ 1.84
ZFC3H1-208ENST00000550712 PHF23Q9BUL5 403 aaPredicted RBP23.4■■□□□ 1.34
ZFC3H1-208ENST00000550712 SENP3Q9H4L4 574 aaPredicted RBP22.98■■□□□ 1.27
ZFC3H1-208ENST00000550712 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
ZFC3H1-208ENST00000550712 FOXD1Q16676 465 aa21.36■■□□□ 1.01
ZFC3H1-208ENST00000550712 PPP6R1Q9UPN7 881 aa20.63■□□□□ 0.89
ZFC3H1-208ENST00000550712 ADRA2BP18089 450 aa20.57■□□□□ 0.88
ZFC3H1-208ENST00000550712 POTEDQ86YR6 584 aa20.13■□□□□ 0.81
ZFC3H1-208ENST00000550712 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
ZFC3H1-208ENST00000550712 MSH5O43196 834 aa19.63■□□□□ 0.73
ZFC3H1-208ENST00000550712 PPP4R3CPQ6ZMV5 832 aa19■□□□□ 0.63
ZFC3H1-208ENST00000550712 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
ZFC3H1-208ENST00000550712 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
ZFC3H1-208ENST00000550712 KCNA4P22459 653 aa18.64■□□□□ 0.57
ZFC3H1-208ENST00000550712 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
ZFC3H1-208ENST00000550712 CNKSR2Q8WXI2 1034 aa18.45■□□□□ 0.54
ZFC3H1-208ENST00000550712 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
ZFC3H1-208ENST00000550712 NPM3O75607 178 aaKnown RBP18.27■□□□□ 0.52
ZFC3H1-208ENST00000550712 RNF216Q9NWF9 866 aaPredicted RBP18.09■□□□□ 0.49
ZFC3H1-208ENST00000550712 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
ZFC3H1-208ENST00000550712 DNAJC5BQ9UF47 199 aa17.8■□□□□ 0.44
ZFC3H1-208ENST00000550712 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
ZFC3H1-208ENST00000550712 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
ZFC3H1-208ENST00000550712 SLC4A2P04920 1241 aa17.27■□□□□ 0.36
ZFC3H1-208ENST00000550712 EHMT2Q96KQ7 1210 aa17.25■□□□□ 0.35
ZFC3H1-208ENST00000550712 ZBTB22O15209 634 aa17.2■□□□□ 0.34
ZFC3H1-208ENST00000550712 CSRNP3Q8WYN3 585 aa17.11■□□□□ 0.33
ZFC3H1-208ENST00000550712 FOXD4L1Q9NU39 408 aa17.11■□□□□ 0.33
ZFC3H1-208ENST00000550712 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.1■□□□□ 0.331e-9■■■□□ 15.9
ZFC3H1-208ENST00000550712 U3KPZ7 1027 aaPredicted RBP16.9■□□□□ 0.3
ZFC3H1-208ENST00000550712 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
ZFC3H1-208ENST00000550712 MYCNP04198 464 aaPredicted RBP16.84■□□□□ 0.29
ZFC3H1-208ENST00000550712 C1QBPQ07021 282 aaKnown RBP16.65■□□□□ 0.26
ZFC3H1-208ENST00000550712 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.64■□□□□ 0.25
ZFC3H1-208ENST00000550712 HNRNPUL2Q1KMD3 747 aaKnown RBP16.64■□□□□ 0.25
ZFC3H1-208ENST00000550712 SAMD1Q6SPF0 538 aaPredicted RBP16.59■□□□□ 0.25
ZFC3H1-208ENST00000550712 ATXN8OSP0DMR3 200 aa16.52■□□□□ 0.24
ZFC3H1-208ENST00000550712 CACNB1Q02641 598 aaPredicted RBP16.49■□□□□ 0.23
ZFC3H1-208ENST00000550712 ATF5Q9Y2D1 282 aaPredicted RBP16.45■□□□□ 0.22
ZFC3H1-208ENST00000550712 APLP2Q06481 763 aa16.42■□□□□ 0.22
ZFC3H1-208ENST00000550712 SPINK5Q9NQ38 1064 aaPredicted RBP16.42■□□□□ 0.22
ZFC3H1-208ENST00000550712 CAPN15O75808 1086 aa16.27■□□□□ 0.2
ZFC3H1-208ENST00000550712 ZNF219Q9P2Y4 722 aaPredicted RBP16.23■□□□□ 0.19
ZFC3H1-208ENST00000550712 TRHP20396 242 aaPredicted RBP16.21■□□□□ 0.19
ZFC3H1-208ENST00000550712 DSG3P32926 999 aa16.07■□□□□ 0.16
ZFC3H1-208ENST00000550712 POLA2Q14181 598 aa16■□□□□ 0.15
ZFC3H1-208ENST00000550712 ABCB7O75027 752 aa15.99■□□□□ 0.15
ZFC3H1-208ENST00000550712 MKRN4PQ13434 485 aaPredicted RBP15.75■□□□□ 0.11
ZFC3H1-208ENST00000550712 ZBTB12Q9Y330 459 aaPredicted RBP15.7■□□□□ 0.1
ZFC3H1-208ENST00000550712 FBLN2P98095 1184 aa15.65■□□□□ 0.1
ZFC3H1-208ENST00000550712 POTEHQ6S545 545 aa15.5■□□□□ 0.07
ZFC3H1-208ENST00000550712 OSCARQ8IYS5 282 aa15.46■□□□□ 0.07
ZFC3H1-208ENST00000550712 FKBP8Q14318 412 aa15.4■□□□□ 0.06
ZFC3H1-208ENST00000550712 SPDYE4A6NLX3 237 aa15.34■□□□□ 0.05
ZFC3H1-208ENST00000550712 SPDYE2BA6NHP3 402 aa15.32■□□□□ 0.04
ZFC3H1-208ENST00000550712 SPDYE6P0CI01 402 aa15.32■□□□□ 0.04
ZFC3H1-208ENST00000550712 SPDYE2Q495Y8 402 aa15.32■□□□□ 0.04
ZFC3H1-208ENST00000550712 ZNF692Q9BU19 519 aaPredicted RBP15.25■□□□□ 0.03
ZFC3H1-208ENST00000550712 SSUH2Q9Y2M2 353 aa15.25■□□□□ 0.03
ZFC3H1-208ENST00000550712 RBM42Q9BTD8 480 aaKnown RBP15.24■□□□□ 0.03
ZFC3H1-208ENST00000550712 PROM2Q8N271 834 aa15.19■□□□□ 0.02
ZFC3H1-208ENST00000550712 AKT1S1Q96B36 256 aa15.1■□□□□ 0.01
ZFC3H1-208ENST00000550712 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
ZFC3H1-208ENST00000550712 REM2Q8IYK8 340 aaPredicted RBP14.97□□□□□ -0.01
ZFC3H1-208ENST00000550712 SPDYE1Q8NFV5 336 aaPredicted RBP14.83□□□□□ -0.04
ZFC3H1-208ENST00000550712 FBXO3Q9UK99 471 aa14.81□□□□□ -0.04
ZFC3H1-208ENST00000550712 PITPNM1O00562 1244 aa14.8□□□□□ -0.04
ZFC3H1-208ENST00000550712 STAG3Q9UJ98 1225 aa14.8□□□□□ -0.04
ZFC3H1-208ENST00000550712 CLEC11AQ9Y240 323 aa14.73□□□□□ -0.05
ZFC3H1-208ENST00000550712 VASPP50552 380 aaPredicted RBP14.65□□□□□ -0.06
ZFC3H1-208ENST00000550712 PRR29P0C7W0 189 aa14.62□□□□□ -0.07
ZFC3H1-208ENST00000550712 CHRDL2Q6WN34 429 aa14.62□□□□□ -0.07
ZFC3H1-208ENST00000550712 FXR2P51116 673 aaKnown RBP eCLIP14.53□□□□□ -0.08
ZFC3H1-208ENST00000550712 MIER1Q8N108 512 aa14.52□□□□□ -0.09
ZFC3H1-208ENST00000550712 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
ZFC3H1-208ENST00000550712 IFNLR1Q8IU57 520 aaPredicted RBP14.5□□□□□ -0.09
ZFC3H1-208ENST00000550712 PLCD3Q8N3E9 789 aa14.48□□□□□ -0.09
ZFC3H1-208ENST00000550712 PIP4P2Q8N4L2 257 aa14.46□□□□□ -0.09
ZFC3H1-208ENST00000550712 MNX1P50219 401 aaPredicted RBP14.42□□□□□ -0.1
ZFC3H1-208ENST00000550712 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
ZFC3H1-208ENST00000550712 PRKAR2AP13861 404 aaKnown RBP14.4□□□□□ -0.1
ZFC3H1-208ENST00000550712 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
ZFC3H1-208ENST00000550712 KLHL34Q8N239 644 aa14.32□□□□□ -0.12
ZFC3H1-208ENST00000550712 ZBTB47Q9UFB7 747 aaPredicted RBP14.32□□□□□ -0.12
ZFC3H1-208ENST00000550712 FARP1Q9Y4F1 1045 aaPredicted RBP14.3□□□□□ -0.12
ZFC3H1-208ENST00000550712 SPOCK2Q92563 424 aa14.25□□□□□ -0.13
ZFC3H1-208ENST00000550712 NUBP1P53384 320 aa14.22□□□□□ -0.13
ZFC3H1-208ENST00000550712 NPM1P06748 294 aaKnown RBP eCLIP14.2□□□□□ -0.14
ZFC3H1-208ENST00000550712 RASEFQ8IZ41 740 aa14.13□□□□□ -0.15
ZFC3H1-208ENST00000550712 AMER1Q5JTC6 1135 aaPredicted RBP14.11□□□□□ -0.15
ZFC3H1-208ENST00000550712 RTN4Q9NQC3 1192 aaKnown RBP14.11□□□□□ -0.15
ZFC3H1-208ENST00000550712 PKD2Q13563 968 aa14.04□□□□□ -0.16
ZFC3H1-208ENST00000550712 C19orf67A6NJJ6 358 aa14.03□□□□□ -0.16
ZFC3H1-208ENST00000550712 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
ZFC3H1-208ENST00000550712 GSE1Q14687 1217 aa14□□□□□ -0.17
ZFC3H1-208ENST00000550712 DCAF8Q5TAQ9 597 aa13.99□□□□□ -0.17
ZFC3H1-208ENST00000550712 TSPYL2Q9H2G4 693 aaPredicted RBP13.99□□□□□ -0.17
ZFC3H1-208ENST00000550712 CIZ1Q9ULV3 898 aaPredicted RBP13.99□□□□□ -0.17
ZFC3H1-208ENST00000550712 CD44P16070 742 aaKnown RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms