RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 NISCHQ9Y2I1 1504 aa36.77■■■■□ 3.48
IFFO1-201ENST00000336604 SHROOM4Q9ULL8 1493 aa31.51■■■□□ 2.63
IFFO1-201ENST00000336604 CCDC180Q9P1Z9 1646 aa31.14■■■□□ 2.58
IFFO1-201ENST00000336604 ZCCHC6Q5VYS8 1495 aaKnown RBP31.11■■■□□ 2.57
IFFO1-201ENST00000336604 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
IFFO1-201ENST00000336604 DCAF8L2P0C7V8 631 aa30.59■■■□□ 2.49
IFFO1-201ENST00000336604 DCAF1Q9Y4B6 1507 aa30.11■■■□□ 2.41
IFFO1-201ENST00000336604 CHIC1Q5VXU3 224 aa30.06■■■□□ 2.4
IFFO1-201ENST00000336604 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
IFFO1-201ENST00000336604 ABCC9O60706 1549 aa29.36■■■□□ 2.29
IFFO1-201ENST00000336604 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
IFFO1-201ENST00000336604 PCGF6Q9BYE7 350 aa29.23■■■□□ 2.27
IFFO1-201ENST00000336604 HRCP23327 699 aa29.22■■■□□ 2.27
IFFO1-201ENST00000336604 LOC105371045A0A1W2PR82 267 aa29.22■■■□□ 2.27
IFFO1-201ENST00000336604 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
IFFO1-201ENST00000336604 RB1CC1Q8TDY2 1594 aa28.86■■■□□ 2.21
IFFO1-201ENST00000336604 NACADO15069 1562 aa28.82■■■□□ 2.2
IFFO1-201ENST00000336604 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
IFFO1-201ENST00000336604 CECR2Q9BXF3 1484 aa28.73■■■□□ 2.19
IFFO1-201ENST00000336604 PPARGC1BQ86YN6 1023 aaKnown RBP28.67■■■□□ 2.18
IFFO1-201ENST00000336604 MROH2BQ7Z745 1585 aa28.62■■■□□ 2.17
IFFO1-201ENST00000336604 TRIM26Q12899 539 aaPredicted RBP28.6■■■□□ 2.17
IFFO1-201ENST00000336604 FAM9AQ8IZU1 332 aaPredicted RBP28.59■■■□□ 2.17
IFFO1-201ENST00000336604 WIZO95785 1651 aa28.46■■■□□ 2.15
IFFO1-201ENST00000336604 EHMT2Q96KQ7 1210 aa28.39■■■□□ 2.14
IFFO1-201ENST00000336604 BAZ1AQ9NRL2 1556 aaPredicted RBP28.24■■■□□ 2.11
IFFO1-201ENST00000336604 EIF4G1Q04637 1599 aaKnown RBP28.07■■■□□ 2.08
IFFO1-201ENST00000336604 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
IFFO1-201ENST00000336604 TOP2AP11388 1531 aaKnown RBP27.97■■■□□ 2.07
IFFO1-201ENST00000336604 ZEB1P37275 1124 aaPredicted RBP27.94■■■□□ 2.06
IFFO1-201ENST00000336604 UNC13AQ9UPW8 1703 aa27.92■■■□□ 2.06
IFFO1-201ENST00000336604 CCDC88BA6NC98 1476 aa27.91■■■□□ 2.06
IFFO1-201ENST00000336604 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
IFFO1-201ENST00000336604 SMARCA2P51531 1590 aa27.84■■■□□ 2.05
IFFO1-201ENST00000336604 PABPN1Q86U42 306 aaKnown RBP eCLIP27.74■■■□□ 2.03
IFFO1-201ENST00000336604 SOGA1O94964 1423 aa27.65■■■□□ 2.02
IFFO1-201ENST00000336604 BICRAQ9NZM4 1560 aa27.61■■■□□ 2.01
IFFO1-201ENST00000336604 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
IFFO1-201ENST00000336604 CEP162Q5TB80 1403 aa27.53■■■□□ 2
IFFO1-201ENST00000336604 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.51■■□□□ 1.99
IFFO1-201ENST00000336604 RUSC2Q8N2Y8 1516 aa27.51■■□□□ 1.99
IFFO1-201ENST00000336604 TTBK1Q5TCY1 1321 aaPredicted RBP27.48■■□□□ 1.99
IFFO1-201ENST00000336604 CSRNP3Q8WYN3 585 aa27.47■■□□□ 1.99
IFFO1-201ENST00000336604 WRNQ14191 1432 aaPredicted RBP eCLIP27.47■■□□□ 1.99
IFFO1-201ENST00000336604 TNIKQ9UKE5 1360 aa27.45■■□□□ 1.98
IFFO1-201ENST00000336604 SCAF1Q9H7N4 1312 aaKnown RBP27.43■■□□□ 1.98
IFFO1-201ENST00000336604 EEA1Q15075 1411 aa27.42■■□□□ 1.98
IFFO1-201ENST00000336604 CCER1Q8TC90 406 aaPredicted RBP27.41■■□□□ 1.98
IFFO1-201ENST00000336604 PEG3Q9GZU2 1588 aa27.41■■□□□ 1.98
IFFO1-201ENST00000336604 UBTFP17480 764 aaKnown RBP27.41■■□□□ 1.98
IFFO1-201ENST00000336604 GOLGA3Q08378 1498 aa27.28■■□□□ 1.96
IFFO1-201ENST00000336604 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
IFFO1-201ENST00000336604 SYNJ1O43426 1573 aa27.24■■□□□ 1.95
IFFO1-201ENST00000336604 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
IFFO1-201ENST00000336604 CEP164Q9UPV0 1460 aa27.12■■□□□ 1.93
IFFO1-201ENST00000336604 KIF21BO75037 1637 aa27.05■■□□□ 1.92
IFFO1-201ENST00000336604 CLIP1P30622 1438 aa27■■□□□ 1.91
IFFO1-201ENST00000336604 RAPGEF2Q9Y4G8 1499 aa26.96■■□□□ 1.91
IFFO1-201ENST00000336604 RANGAP1P46060 587 aaPredicted RBP26.91■■□□□ 1.9
IFFO1-201ENST00000336604 DIEXFQ68CQ4 756 aaKnown RBP26.89■■□□□ 1.9
IFFO1-201ENST00000336604 VPS8Q8N3P4 1428 aa26.88■■□□□ 1.89
IFFO1-201ENST00000336604 TOP2BQ02880 1626 aa26.87■■□□□ 1.89
IFFO1-201ENST00000336604 HNRNPUL2Q1KMD3 747 aaKnown RBP26.85■■□□□ 1.89
IFFO1-201ENST00000336604 ACIN1Q9UKV3 1341 aaKnown RBP26.78■■□□□ 1.88
IFFO1-201ENST00000336604 NEUROD1Q13562 356 aa26.77■■□□□ 1.88
IFFO1-201ENST00000336604 APLP2Q06481 763 aa26.77■■□□□ 1.88
IFFO1-201ENST00000336604 BIVM-ERCC5R4GMW8 1640 aa26.74■■□□□ 1.87
IFFO1-201ENST00000336604 NCAPD3P42695 1498 aa26.71■■□□□ 1.87
IFFO1-201ENST00000336604 HMGXB3Q12766 1538 aa26.68■■□□□ 1.86
IFFO1-201ENST00000336604 ZNF316A6NFI3 1004 aaPredicted RBP26.65■■□□□ 1.86
IFFO1-201ENST00000336604 PRXQ9BXM0 1461 aa26.65■■□□□ 1.86
IFFO1-201ENST00000336604 CUX1P39880 1505 aa26.63■■□□□ 1.85
IFFO1-201ENST00000336604 GTF3C3Q9Y5Q9 886 aa26.62■■□□□ 1.85
IFFO1-201ENST00000336604 ERICH3Q5RHP9 1530 aa26.61■■□□□ 1.85
IFFO1-201ENST00000336604 ARAP1Q96P48 1450 aa26.55■■□□□ 1.84
IFFO1-201ENST00000336604 CFTRP13569 1480 aa26.53■■□□□ 1.84
IFFO1-201ENST00000336604 KIF27Q86VH2 1401 aa26.52■■□□□ 1.84
IFFO1-201ENST00000336604 CENPBP07199 599 aaPredicted RBP26.5■■□□□ 1.83
IFFO1-201ENST00000336604 KANK4Q5T7N3 995 aaPredicted RBP26.48■■□□□ 1.83
IFFO1-201ENST00000336604 MYT1Q01538 1121 aa26.38■■□□□ 1.81
IFFO1-201ENST00000336604 MIER1Q8N108 512 aa26.32■■□□□ 1.8
IFFO1-201ENST00000336604 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
IFFO1-201ENST00000336604 YTHDC1Q96MU7 727 aaKnown RBP26.31■■□□□ 1.8
IFFO1-201ENST00000336604 DHX57Q6P158 1386 aaKnown RBP26.29■■□□□ 1.8
IFFO1-201ENST00000336604 CUX2O14529 1486 aa26.27■■□□□ 1.8
IFFO1-201ENST00000336604 IGF1RP08069 1367 aa26.25■■□□□ 1.79
IFFO1-201ENST00000336604 RRBP1Q9P2E9 1410 aaKnown RBP26.25■■□□□ 1.79
IFFO1-201ENST00000336604 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
IFFO1-201ENST00000336604 CLSPNQ9HAW4 1339 aa26.22■■□□□ 1.79
IFFO1-201ENST00000336604 PRDM2Q13029 1718 aa26.2■■□□□ 1.78
IFFO1-201ENST00000336604 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
IFFO1-201ENST00000336604 FGD5Q6ZNL6 1462 aa26.15■■□□□ 1.78
IFFO1-201ENST00000336604 ITGAEP38570 1179 aa26.14■■□□□ 1.77
IFFO1-201ENST00000336604 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
IFFO1-201ENST00000336604 TIAM1Q13009 1591 aa26.01■■□□□ 1.75
IFFO1-201ENST00000336604 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
IFFO1-201ENST00000336604 FANCD2Q9BXW9 1451 aa25.99■■□□□ 1.75
IFFO1-201ENST00000336604 P3H3Q8IVL6 736 aa25.96■■□□□ 1.75
IFFO1-201ENST00000336604 RAB3GAP2Q9H2M9 1393 aa25.95■■□□□ 1.74
IFFO1-201ENST00000336604 MAP3K1Q13233 1512 aa25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms