RNA–Protein interactions for RNA: ENST00000471408.5

IFFO1-207, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,843 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-207ENST00000471408 NISCHQ9Y2I1 1504 aa28.52■■■□□ 2.16
IFFO1-207ENST00000471408 CCDC180Q9P1Z9 1646 aa24.41■■□□□ 1.5
IFFO1-207ENST00000471408 DCAF8L2P0C7V8 631 aa24.3■■□□□ 1.48
IFFO1-207ENST00000471408 SHROOM4Q9ULL8 1493 aa24.16■■□□□ 1.46
IFFO1-207ENST00000471408 ZCCHC6Q5VYS8 1495 aaKnown RBP23.95■■□□□ 1.42
IFFO1-207ENST00000471408 ABCC9O60706 1549 aa23.51■■□□□ 1.35
IFFO1-207ENST00000471408 SUPT5HO00267 1087 aaKnown RBP23.41■■□□□ 1.34
IFFO1-207ENST00000471408 DCAF1Q9Y4B6 1507 aa23.26■■□□□ 1.31
IFFO1-207ENST00000471408 SCRIBQ14160 1630 aa23■■□□□ 1.27
IFFO1-207ENST00000471408 MYO15BQ96JP2 1530 aa22.81■■□□□ 1.24
IFFO1-207ENST00000471408 NACADO15069 1562 aa22.81■■□□□ 1.24
IFFO1-207ENST00000471408 RB1CC1Q8TDY2 1594 aa22.63■■□□□ 1.21
IFFO1-207ENST00000471408 PABPN1Q86U42 306 aaKnown RBP eCLIP22.45■■□□□ 1.18
IFFO1-207ENST00000471408 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
IFFO1-207ENST00000471408 RSF1Q96T23 1441 aaPredicted RBP22.37■■□□□ 1.17
IFFO1-207ENST00000471408 CHIC1Q5VXU3 224 aa22.25■■□□□ 1.15
IFFO1-207ENST00000471408 UNC13AQ9UPW8 1703 aa22.2■■□□□ 1.14
IFFO1-207ENST00000471408 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
IFFO1-207ENST00000471408 WIZO95785 1651 aa22.02■■□□□ 1.12
IFFO1-207ENST00000471408 BICRAQ9NZM4 1560 aa21.99■■□□□ 1.11
IFFO1-207ENST00000471408 BAZ1AQ9NRL2 1556 aaPredicted RBP21.95■■□□□ 1.11
IFFO1-207ENST00000471408 SMARCA4P51532 1647 aa21.83■■□□□ 1.09
IFFO1-207ENST00000471408 TRIM41Q8WV44 630 aa21.78■■□□□ 1.08
IFFO1-207ENST00000471408 FAM9AQ8IZU1 332 aaPredicted RBP21.71■■□□□ 1.07
IFFO1-207ENST00000471408 LOC105371045A0A1W2PR82 267 aa21.7■■□□□ 1.06
IFFO1-207ENST00000471408 EHMT2Q96KQ7 1210 aa21.66■■□□□ 1.06
IFFO1-207ENST00000471408 TOP2AP11388 1531 aaKnown RBP21.6■■□□□ 1.05
IFFO1-207ENST00000471408 CCDC88BA6NC98 1476 aa21.58■■□□□ 1.05
IFFO1-207ENST00000471408 ATAD2BQ9ULI0 1458 aa21.49■■□□□ 1.03
IFFO1-207ENST00000471408 SMARCA2P51531 1590 aa21.48■■□□□ 1.03
IFFO1-207ENST00000471408 BAZ1BQ9UIG0 1483 aaKnown RBP21.45■■□□□ 1.02
IFFO1-207ENST00000471408 EIF4G1Q04637 1599 aaKnown RBP21.37■■□□□ 1.01
IFFO1-207ENST00000471408 ABCC8Q09428 1581 aa21.37■■□□□ 1.01
IFFO1-207ENST00000471408 PEG3Q9GZU2 1588 aa21.35■■□□□ 1.01
IFFO1-207ENST00000471408 NCAPD3P42695 1498 aa21.15■□□□□ 0.98
IFFO1-207ENST00000471408 WRNQ14191 1432 aaPredicted RBP eCLIP21.08■□□□□ 0.96
IFFO1-207ENST00000471408 HRCP23327 699 aa21.06■□□□□ 0.96
IFFO1-207ENST00000471408 SOGA1O94964 1423 aa21.06■□□□□ 0.96
IFFO1-207ENST00000471408 PCGF6Q9BYE7 350 aa21.05■□□□□ 0.96
IFFO1-207ENST00000471408 CC2D2AQ9P2K1 1620 aa21.03■□□□□ 0.96
IFFO1-207ENST00000471408 HMGXB3Q12766 1538 aa21.03■□□□□ 0.96
IFFO1-207ENST00000471408 RUSC2Q8N2Y8 1516 aa20.98■□□□□ 0.95
IFFO1-207ENST00000471408 SYNJ1O43426 1573 aa20.92■□□□□ 0.94
IFFO1-207ENST00000471408 UBTFP17480 764 aaKnown RBP20.91■□□□□ 0.94
IFFO1-207ENST00000471408 CSRNP3Q8WYN3 585 aa20.91■□□□□ 0.94
IFFO1-207ENST00000471408 DNAJC5BQ9UF47 199 aa20.9■□□□□ 0.94
IFFO1-207ENST00000471408 PPARGC1BQ86YN6 1023 aaKnown RBP20.89■□□□□ 0.94
IFFO1-207ENST00000471408 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.92
IFFO1-207ENST00000471408 CFTRP13569 1480 aa20.81■□□□□ 0.92
IFFO1-207ENST00000471408 CADPSQ9ULU8 1353 aa20.78■□□□□ 0.92
IFFO1-207ENST00000471408 TTBK1Q5TCY1 1321 aaPredicted RBP20.76■□□□□ 0.91
IFFO1-207ENST00000471408 NESP48681 1621 aa20.7■□□□□ 0.9
IFFO1-207ENST00000471408 TRIM26Q12899 539 aaPredicted RBP20.68■□□□□ 0.9
IFFO1-207ENST00000471408 EEA1Q15075 1411 aa20.68■□□□□ 0.9
IFFO1-207ENST00000471408 CUX1P39880 1505 aa20.68■□□□□ 0.9
IFFO1-207ENST00000471408 TOP2BQ02880 1626 aa20.67■□□□□ 0.9
IFFO1-207ENST00000471408 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
IFFO1-207ENST00000471408 FANCD2Q9BXW9 1451 aa20.58■□□□□ 0.89
IFFO1-207ENST00000471408 GOLGA3Q08378 1498 aa20.58■□□□□ 0.88
IFFO1-207ENST00000471408 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
IFFO1-207ENST00000471408 RAPGEF2Q9Y4G8 1499 aa20.55■□□□□ 0.88
IFFO1-207ENST00000471408 BIVM-ERCC5R4GMW8 1640 aa20.55■□□□□ 0.88
IFFO1-207ENST00000471408 CEP164Q9UPV0 1460 aa20.53■□□□□ 0.88
IFFO1-207ENST00000471408 KIF27Q86VH2 1401 aa20.49■□□□□ 0.87
IFFO1-207ENST00000471408 CUX2O14529 1486 aa20.47■□□□□ 0.87
IFFO1-207ENST00000471408 FGD5Q6ZNL6 1462 aa20.46■□□□□ 0.87
IFFO1-207ENST00000471408 PRDM2Q13029 1718 aa20.44■□□□□ 0.86
IFFO1-207ENST00000471408 RAD54L2Q9Y4B4 1467 aa20.4■□□□□ 0.86
IFFO1-207ENST00000471408 CLIP1P30622 1438 aa20.39■□□□□ 0.86
IFFO1-207ENST00000471408 KIF21BO75037 1637 aa20.39■□□□□ 0.85
IFFO1-207ENST00000471408 PDS5BQ9NTI5 1447 aa20.34■□□□□ 0.85
IFFO1-207ENST00000471408 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
IFFO1-207ENST00000471408 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.85
IFFO1-207ENST00000471408 PRXQ9BXM0 1461 aa20.32■□□□□ 0.84
IFFO1-207ENST00000471408 IGF1RP08069 1367 aa20.32■□□□□ 0.84
IFFO1-207ENST00000471408 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
IFFO1-207ENST00000471408 URB2Q14146 1524 aaKnown RBP20.28■□□□□ 0.84
IFFO1-207ENST00000471408 APLP2Q06481 763 aa20.27■□□□□ 0.84
IFFO1-207ENST00000471408 TDRD9Q8NDG6 1382 aaKnown RBP20.27■□□□□ 0.84
IFFO1-207ENST00000471408 DNMBPQ6XZF7 1577 aa20.27■□□□□ 0.84
IFFO1-207ENST00000471408 CARMIL1Q5VZK9 1371 aa20.26■□□□□ 0.83
IFFO1-207ENST00000471408 ZEB1P37275 1124 aaPredicted RBP20.22■□□□□ 0.83
IFFO1-207ENST00000471408 KIF21AQ7Z4S6 1674 aa20.22■□□□□ 0.83
IFFO1-207ENST00000471408 P3H3Q8IVL6 736 aa20.21■□□□□ 0.83
IFFO1-207ENST00000471408 ERICH3Q5RHP9 1530 aa20.19■□□□□ 0.82
IFFO1-207ENST00000471408 VPS8Q8N3P4 1428 aa20.15■□□□□ 0.82
IFFO1-207ENST00000471408 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
IFFO1-207ENST00000471408 ATP1B4Q9UN42 357 aaPredicted RBP20.13■□□□□ 0.81
IFFO1-207ENST00000471408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.11■□□□□ 0.81
IFFO1-207ENST00000471408 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
IFFO1-207ENST00000471408 ARAP1Q96P48 1450 aa20.08■□□□□ 0.81
IFFO1-207ENST00000471408 HNRNPUL2Q1KMD3 747 aaKnown RBP20.05■□□□□ 0.8
IFFO1-207ENST00000471408 GAPVD1Q14C86 1478 aa20.04■□□□□ 0.8
IFFO1-207ENST00000471408 AQRO60306 1485 aaKnown RBP eCLIP20.03■□□□□ 0.84e-8■■■■□ 24.3
IFFO1-207ENST00000471408 ARHGAP35Q9NRY4 1499 aa20.02■□□□□ 0.8
IFFO1-207ENST00000471408 KANK4Q5T7N3 995 aaPredicted RBP20.02■□□□□ 0.8
IFFO1-207ENST00000471408 MRC2Q9UBG0 1479 aa20.01■□□□□ 0.79
IFFO1-207ENST00000471408 CCER1Q8TC90 406 aaPredicted RBP20■□□□□ 0.79
IFFO1-207ENST00000471408 ZNF608Q9ULD9 1512 aaPredicted RBP19.92■□□□□ 0.78
IFFO1-207ENST00000471408 FHOD3Q2V2M9 1422 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms