RNA–Protein interactions for RNA: ENST00000396830.2

IFFO1-203, Transcript of intermediate filament family orphan 1, humanhuman

TSL 1 (best)

Gene IFFO1, Length 1,776 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-203ENST00000396830 NISCHQ9Y2I1 1504 aa40.3■■■■■ 4.04
IFFO1-203ENST00000396830 CCDC180Q9P1Z9 1646 aa35.3■■■■□ 3.24
IFFO1-203ENST00000396830 ZCCHC6Q5VYS8 1495 aaKnown RBP33.78■■■■□ 3
IFFO1-203ENST00000396830 ABCC9O60706 1549 aa33.73■■■□□ 2.99
IFFO1-203ENST00000396830 DCAF8L2P0C7V8 631 aa33.39■■■□□ 2.94
IFFO1-203ENST00000396830 DCAF1Q9Y4B6 1507 aa33.29■■■□□ 2.92
IFFO1-203ENST00000396830 MYO15BQ96JP2 1530 aa33.01■■■□□ 2.88
IFFO1-203ENST00000396830 NACADO15069 1562 aa32.95■■■□□ 2.86
IFFO1-203ENST00000396830 RB1CC1Q8TDY2 1594 aa32.76■■■□□ 2.83
IFFO1-203ENST00000396830 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
IFFO1-203ENST00000396830 SCRIBQ14160 1630 aa32.45■■■□□ 2.78
IFFO1-203ENST00000396830 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
IFFO1-203ENST00000396830 BICRAQ9NZM4 1560 aa31.84■■■□□ 2.69
IFFO1-203ENST00000396830 PABPN1Q86U42 306 aaKnown RBP eCLIP31.74■■■□□ 2.67
IFFO1-203ENST00000396830 CECR2Q9BXF3 1484 aa31.39■■■□□ 2.62
IFFO1-203ENST00000396830 SUPT5HO00267 1087 aaKnown RBP31.28■■■□□ 2.6
IFFO1-203ENST00000396830 MROH2BQ7Z745 1585 aa31.15■■■□□ 2.58
IFFO1-203ENST00000396830 RSF1Q96T23 1441 aaPredicted RBP31.13■■■□□ 2.57
IFFO1-203ENST00000396830 BAZ1AQ9NRL2 1556 aaPredicted RBP31.12■■■□□ 2.57
IFFO1-203ENST00000396830 SMARCA4P51532 1647 aa31.07■■■□□ 2.56
IFFO1-203ENST00000396830 WIZO95785 1651 aa30.89■■■□□ 2.54
IFFO1-203ENST00000396830 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
IFFO1-203ENST00000396830 PEG3Q9GZU2 1588 aa30.68■■■□□ 2.5
IFFO1-203ENST00000396830 ATAD2BQ9ULI0 1458 aa30.64■■■□□ 2.49
IFFO1-203ENST00000396830 SMARCA2P51531 1590 aa30.58■■■□□ 2.49
IFFO1-203ENST00000396830 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
IFFO1-203ENST00000396830 CC2D2AQ9P2K1 1620 aa30.51■■■□□ 2.48
IFFO1-203ENST00000396830 BAZ1BQ9UIG0 1483 aaKnown RBP30.42■■■□□ 2.46
IFFO1-203ENST00000396830 NCAPD3P42695 1498 aa30.41■■■□□ 2.46
IFFO1-203ENST00000396830 HMGXB3Q12766 1538 aa30.34■■■□□ 2.45
IFFO1-203ENST00000396830 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
IFFO1-203ENST00000396830 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
IFFO1-203ENST00000396830 DNAJC5BQ9UF47 199 aa30.11■■■□□ 2.41
IFFO1-203ENST00000396830 CFTRP13569 1480 aa29.64■■■□□ 2.34
IFFO1-203ENST00000396830 CADPSQ9ULU8 1353 aa29.6■■■□□ 2.33
IFFO1-203ENST00000396830 NESP48681 1621 aa29.52■■■□□ 2.32
IFFO1-203ENST00000396830 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
IFFO1-203ENST00000396830 ABCC8Q09428 1581 aa29.49■■■□□ 2.31
IFFO1-203ENST00000396830 TRIM41Q8WV44 630 aa29.44■■■□□ 2.3
IFFO1-203ENST00000396830 LAMC3Q9Y6N6 1575 aa29.44■■■□□ 2.3
IFFO1-203ENST00000396830 FANCD2Q9BXW9 1451 aa29.29■■■□□ 2.28
IFFO1-203ENST00000396830 WRNQ14191 1432 aaPredicted RBP eCLIP29.29■■■□□ 2.28
IFFO1-203ENST00000396830 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
IFFO1-203ENST00000396830 PDS5BQ9NTI5 1447 aa29.19■■■□□ 2.26
IFFO1-203ENST00000396830 KIF21AQ7Z4S6 1674 aa29.17■■■□□ 2.26
IFFO1-203ENST00000396830 CUX1P39880 1505 aa29.15■■■□□ 2.26
IFFO1-203ENST00000396830 CEP164Q9UPV0 1460 aa29.13■■■□□ 2.25
IFFO1-203ENST00000396830 TOP2BQ02880 1626 aa29.12■■■□□ 2.25
IFFO1-203ENST00000396830 BIVM-ERCC5R4GMW8 1640 aa29.1■■■□□ 2.25
IFFO1-203ENST00000396830 LOC105371045A0A1W2PR82 267 aa29.04■■■□□ 2.24
IFFO1-203ENST00000396830 URB2Q14146 1524 aaKnown RBP28.98■■■□□ 2.23
IFFO1-203ENST00000396830 DNMBPQ6XZF7 1577 aa28.97■■■□□ 2.23
IFFO1-203ENST00000396830 TOPBP1Q92547 1522 aa28.95■■■□□ 2.22
IFFO1-203ENST00000396830 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
IFFO1-203ENST00000396830 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
IFFO1-203ENST00000396830 FGD5Q6ZNL6 1462 aa28.87■■■□□ 2.21
IFFO1-203ENST00000396830 SOGA1O94964 1423 aa28.85■■■□□ 2.21
IFFO1-203ENST00000396830 FAM9AQ8IZU1 332 aaPredicted RBP28.85■■■□□ 2.21
IFFO1-203ENST00000396830 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
IFFO1-203ENST00000396830 POLA1P09884 1462 aaPredicted RBP28.77■■■□□ 2.2
IFFO1-203ENST00000396830 THOC2Q8NI27 1593 aaKnown RBP28.76■■■□□ 2.19
IFFO1-203ENST00000396830 EEA1Q15075 1411 aa28.75■■■□□ 2.19
IFFO1-203ENST00000396830 WDR62O43379 1518 aa28.74■■■□□ 2.19
IFFO1-203ENST00000396830 RAD54L2Q9Y4B4 1467 aa28.7■■■□□ 2.19
IFFO1-203ENST00000396830 CUX2O14529 1486 aa28.6■■■□□ 2.17
IFFO1-203ENST00000396830 ABCA10Q8WWZ4 1543 aa28.59■■■□□ 2.17
IFFO1-203ENST00000396830 WDR97A6NE52 1622 aa28.57■■■□□ 2.16
IFFO1-203ENST00000396830 TARBP1Q13395 1621 aaKnown RBP28.57■■■□□ 2.16
IFFO1-203ENST00000396830 KIF27Q86VH2 1401 aa28.56■■■□□ 2.16
IFFO1-203ENST00000396830 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
IFFO1-203ENST00000396830 EHMT2Q96KQ7 1210 aa28.47■■■□□ 2.15
IFFO1-203ENST00000396830 IFT140Q96RY7 1462 aa28.45■■■□□ 2.14
IFFO1-203ENST00000396830 TDRD9Q8NDG6 1382 aaKnown RBP28.44■■■□□ 2.14
IFFO1-203ENST00000396830 ABCA5Q8WWZ7 1642 aa28.41■■■□□ 2.14
IFFO1-203ENST00000396830 IGF1RP08069 1367 aa28.39■■■□□ 2.13
IFFO1-203ENST00000396830 ZNF608Q9ULD9 1512 aaPredicted RBP28.36■■■□□ 2.13
IFFO1-203ENST00000396830 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
IFFO1-203ENST00000396830 KIF21BO75037 1637 aa28.34■■■□□ 2.13
IFFO1-203ENST00000396830 AQRO60306 1485 aaKnown RBP eCLIP28.33■■■□□ 2.134e-8■■■■□ 24.3
IFFO1-203ENST00000396830 GOLGA3Q08378 1498 aa28.33■■■□□ 2.13
IFFO1-203ENST00000396830 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
IFFO1-203ENST00000396830 PRXQ9BXM0 1461 aa28.31■■■□□ 2.12
IFFO1-203ENST00000396830 PCGF6Q9BYE7 350 aa28.3■■■□□ 2.12
IFFO1-203ENST00000396830 TRIM26Q12899 539 aaPredicted RBP28.28■■■□□ 2.12
IFFO1-203ENST00000396830 RAPGEF2Q9Y4G8 1499 aa28.27■■■□□ 2.12
IFFO1-203ENST00000396830 PBRM1Q86U86 1689 aa28.25■■■□□ 2.11
IFFO1-203ENST00000396830 EIF4G3O43432 1585 aaKnown RBP28.24■■■□□ 2.11
IFFO1-203ENST00000396830 ERICH3Q5RHP9 1530 aa28.23■■■□□ 2.11
IFFO1-203ENST00000396830 CARMIL1Q5VZK9 1371 aa28.22■■■□□ 2.11
IFFO1-203ENST00000396830 CUL7Q14999 1698 aa28.18■■■□□ 2.1
IFFO1-203ENST00000396830 CEP162Q5TB80 1403 aa28.18■■■□□ 2.1
IFFO1-203ENST00000396830 GRIN2BQ13224 1484 aa28.17■■■□□ 2.1
IFFO1-203ENST00000396830 UBTFP17480 764 aaKnown RBP28.16■■■□□ 2.1
IFFO1-203ENST00000396830 ADAMTS12P58397 1594 aa28.06■■■□□ 2.08
IFFO1-203ENST00000396830 SNAPC4Q5SXM2 1469 aa28.05■■■□□ 2.08
IFFO1-203ENST00000396830 FHAD1B1AJZ9 1412 aa28.02■■■□□ 2.08
IFFO1-203ENST00000396830 HRCP23327 699 aa27.97■■■□□ 2.07
IFFO1-203ENST00000396830 MAGI1Q96QZ7 1491 aaPredicted RBP27.96■■■□□ 2.07
IFFO1-203ENST00000396830 SYNJ2O15056 1496 aa27.87■■■□□ 2.05
IFFO1-203ENST00000396830 CTTNBP2Q8WZ74 1663 aa27.85■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms