RNA–Protein interactions for RNA: ENST00000467857.1

NOP56-208, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 2

Gene NOP56, Length 735 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-208ENST00000467857 AEBP2Q6ZN18 517 aaPredicted RBP20.89■□□□□ 0.93
NOP56-208ENST00000467857 CHIC1Q5VXU3 224 aa20.47■□□□□ 0.87
NOP56-208ENST00000467857 NISCHQ9Y2I1 1504 aa19.67■□□□□ 0.74
NOP56-208ENST00000467857 PHF23Q9BUL5 403 aaPredicted RBP17.97■□□□□ 0.47
NOP56-208ENST00000467857 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
NOP56-208ENST00000467857 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
NOP56-208ENST00000467857 PLPPR3Q6T4P5 718 aa16.66■□□□□ 0.26
NOP56-208ENST00000467857 ZCCHC6Q5VYS8 1495 aaKnown RBP16.58■□□□□ 0.24
NOP56-208ENST00000467857 FOXD1Q16676 465 aa16.46■□□□□ 0.23
NOP56-208ENST00000467857 DCAF1Q9Y4B6 1507 aa16.36■□□□□ 0.21
NOP56-208ENST00000467857 SHROOM4Q9ULL8 1493 aa16.17■□□□□ 0.18
NOP56-208ENST00000467857 DCAF8L2P0C7V8 631 aa16.15■□□□□ 0.18
NOP56-208ENST00000467857 MYO15BQ96JP2 1530 aa16.07■□□□□ 0.16
NOP56-208ENST00000467857 SUPT5HO00267 1087 aaKnown RBP15.83■□□□□ 0.12
NOP56-208ENST00000467857 PPP6R1Q9UPN7 881 aa15.83■□□□□ 0.12
NOP56-208ENST00000467857 NACADO15069 1562 aa15.82■□□□□ 0.12
NOP56-208ENST00000467857 ADRA2BP18089 450 aa15.8■□□□□ 0.12
NOP56-208ENST00000467857 ABCC9O60706 1549 aa15.68■□□□□ 0.1
NOP56-208ENST00000467857 RB1CC1Q8TDY2 1594 aa15.58■□□□□ 0.09
NOP56-208ENST00000467857 SCRIBQ14160 1630 aa15.57■□□□□ 0.08
NOP56-208ENST00000467857 PIAS4Q8N2W9 510 aaPredicted RBP15.52■□□□□ 0.08
NOP56-208ENST00000467857 RSF1Q96T23 1441 aaPredicted RBP15.37■□□□□ 0.05
NOP56-208ENST00000467857 MSH5O43196 834 aa15.24■□□□□ 0.03
NOP56-208ENST00000467857 BAZ1AQ9NRL2 1556 aaPredicted RBP15.21■□□□□ 0.03
NOP56-208ENST00000467857 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
NOP56-208ENST00000467857 MROH2BQ7Z745 1585 aa15.13■□□□□ 0.01
NOP56-208ENST00000467857 UNC13AQ9UPW8 1703 aa15.04■□□□□ -0
NOP56-208ENST00000467857 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
NOP56-208ENST00000467857 WIZO95785 1651 aa14.99□□□□□ -0.01
NOP56-208ENST00000467857 TRIM41Q8WV44 630 aa14.97□□□□□ -0.01
NOP56-208ENST00000467857 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.02
NOP56-208ENST00000467857 BICRAQ9NZM4 1560 aa14.95□□□□□ -0.02
NOP56-208ENST00000467857 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
NOP56-208ENST00000467857 PABPN1Q86U42 306 aaKnown RBP eCLIP14.87□□□□□ -0.037e-13■■□□□ 11.8
NOP56-208ENST00000467857 CCDC88BA6NC98 1476 aa14.8□□□□□ -0.04
NOP56-208ENST00000467857 SMARCA2P51531 1590 aa14.79□□□□□ -0.04
NOP56-208ENST00000467857 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
NOP56-208ENST00000467857 ATAD2BQ9ULI0 1458 aa14.71□□□□□ -0.05
NOP56-208ENST00000467857 LOC105371045A0A1W2PR82 267 aa14.71□□□□□ -0.05
NOP56-208ENST00000467857 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
NOP56-208ENST00000467857 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
NOP56-208ENST00000467857 EEA1Q15075 1411 aa14.62□□□□□ -0.07
NOP56-208ENST00000467857 SCAF1Q9H7N4 1312 aaKnown RBP14.59□□□□□ -0.07
NOP56-208ENST00000467857 NCAPD3P42695 1498 aa14.58□□□□□ -0.08
NOP56-208ENST00000467857 HMGXB3Q12766 1538 aa14.57□□□□□ -0.08
NOP56-208ENST00000467857 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
NOP56-208ENST00000467857 TRIM26Q12899 539 aaPredicted RBP14.52□□□□□ -0.09
NOP56-208ENST00000467857 WRNQ14191 1432 aaPredicted RBP eCLIP14.51□□□□□ -0.09
NOP56-208ENST00000467857 ABCC8Q09428 1581 aa14.49□□□□□ -0.09
NOP56-208ENST00000467857 PCGF6Q9BYE7 350 aa14.47□□□□□ -0.09
NOP56-208ENST00000467857 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
NOP56-208ENST00000467857 HRCP23327 699 aa14.39□□□□□ -0.11
NOP56-208ENST00000467857 TNIKQ9UKE5 1360 aa14.37□□□□□ -0.11
NOP56-208ENST00000467857 SOGA1O94964 1423 aa14.34□□□□□ -0.11
NOP56-208ENST00000467857 CFTRP13569 1480 aa14.33□□□□□ -0.12
NOP56-208ENST00000467857 GOLGA3Q08378 1498 aa14.33□□□□□ -0.12
NOP56-208ENST00000467857 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
NOP56-208ENST00000467857 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
NOP56-208ENST00000467857 CEP164Q9UPV0 1460 aa14.31□□□□□ -0.12
NOP56-208ENST00000467857 SYNJ1O43426 1573 aa14.31□□□□□ -0.12
NOP56-208ENST00000467857 TOP2BQ02880 1626 aa14.31□□□□□ -0.12
NOP56-208ENST00000467857 KCNA4P22459 653 aa14.28□□□□□ -0.12
NOP56-208ENST00000467857 BIVM-ERCC5R4GMW8 1640 aa14.27□□□□□ -0.12
NOP56-208ENST00000467857 UBTFP17480 764 aaKnown RBP14.27□□□□□ -0.13
NOP56-208ENST00000467857 ZEB1P37275 1124 aaPredicted RBP14.27□□□□□ -0.13
NOP56-208ENST00000467857 CNKSR2Q8WXI2 1034 aa14.27□□□□□ -0.13
NOP56-208ENST00000467857 KIF21BO75037 1637 aa14.26□□□□□ -0.13
NOP56-208ENST00000467857 CEP162Q5TB80 1403 aa14.25□□□□□ -0.13
NOP56-208ENST00000467857 EHMT2Q96KQ7 1210 aa14.25□□□□□ -0.13
NOP56-208ENST00000467857 CADPSQ9ULU8 1353 aa14.24□□□□□ -0.13
NOP56-208ENST00000467857 CC2D2AQ9P2K1 1620 aa14.21□□□□□ -0.13
NOP56-208ENST00000467857 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
NOP56-208ENST00000467857 DMRT2Q9Y5R5 561 aa14.2□□□□□ -0.14
NOP56-208ENST00000467857 PRDM2Q13029 1718 aa14.19□□□□□ -0.14
NOP56-208ENST00000467857 KIF27Q86VH2 1401 aa14.17□□□□□ -0.14
NOP56-208ENST00000467857 ERICH3Q5RHP9 1530 aa14.15□□□□□ -0.14
NOP56-208ENST00000467857 CUX1P39880 1505 aa14.14□□□□□ -0.15
NOP56-208ENST00000467857 CLIP1P30622 1438 aa14.09□□□□□ -0.15
NOP56-208ENST00000467857 PRXQ9BXM0 1461 aa14.09□□□□□ -0.15
NOP56-208ENST00000467857 APLP2Q06481 763 aa14.06□□□□□ -0.16
NOP56-208ENST00000467857 RAPGEF2Q9Y4G8 1499 aa14.06□□□□□ -0.16
NOP56-208ENST00000467857 NPM3O75607 178 aaKnown RBP14.04□□□□□ -0.16
NOP56-208ENST00000467857 FANCD2Q9BXW9 1451 aa14.04□□□□□ -0.16
NOP56-208ENST00000467857 VPS8Q8N3P4 1428 aa14.03□□□□□ -0.16
NOP56-208ENST00000467857 LAMC3Q9Y6N6 1575 aa14.02□□□□□ -0.16
NOP56-208ENST00000467857 RNF216Q9NWF9 866 aaPredicted RBP13.99□□□□□ -0.17
NOP56-208ENST00000467857 PDS5BQ9NTI5 1447 aa13.98□□□□□ -0.17
NOP56-208ENST00000467857 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
NOP56-208ENST00000467857 CUX2O14529 1486 aa13.97□□□□□ -0.17
NOP56-208ENST00000467857 FGD5Q6ZNL6 1462 aa13.96□□□□□ -0.17
NOP56-208ENST00000467857 IGF1RP08069 1367 aa13.95□□□□□ -0.18
NOP56-208ENST00000467857 HOXD11P31277 338 aaPredicted RBP13.94□□□□□ -0.18
NOP56-208ENST00000467857 PPARGC1BQ86YN6 1023 aaKnown RBP13.93□□□□□ -0.18
NOP56-208ENST00000467857 CARMIL1Q5VZK9 1371 aa13.92□□□□□ -0.18
NOP56-208ENST00000467857 ABCA10Q8WWZ4 1543 aa13.9□□□□□ -0.18
NOP56-208ENST00000467857 TOPBP1Q92547 1522 aa13.9□□□□□ -0.18
NOP56-208ENST00000467857 CCER1Q8TC90 406 aaPredicted RBP13.86□□□□□ -0.19
NOP56-208ENST00000467857 POLA1P09884 1462 aaPredicted RBP13.85□□□□□ -0.19
NOP56-208ENST00000467857 CUL7Q14999 1698 aa13.82□□□□□ -0.2
NOP56-208ENST00000467857 ARAP1Q96P48 1450 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms