RNA–Protein interactions for RNA: ENST00000552994.5

ZFC3H1-212, Transcript of zinc finger C3H1-type containing, humanhuman

TSL 1 (best)

Gene ZFC3H1, Length 7,597 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFC3H1-212ENST00000552994 DCAF8L2P0C7V8 631 aa21.02■□□□□ 0.95
ZFC3H1-212ENST00000552994 PELP1Q8IZL8 1130 aaKnown RBP19.54■□□□□ 0.72
ZFC3H1-212ENST00000552994 SUPT5HO00267 1087 aaKnown RBP19.45■□□□□ 0.7
ZFC3H1-212ENST00000552994 FAM9AQ8IZU1 332 aaPredicted RBP19.41■□□□□ 0.7
ZFC3H1-212ENST00000552994 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
ZFC3H1-212ENST00000552994 APLP2Q06481 763 aa19.25■□□□□ 0.67
ZFC3H1-212ENST00000552994 MYT1Q01538 1121 aa19.12■□□□□ 0.65
ZFC3H1-212ENST00000552994 SHROOM4Q9ULL8 1493 aa18.97■□□□□ 0.63
ZFC3H1-212ENST00000552994 ERICH6Q7L0X2 663 aa18.75■□□□□ 0.59
ZFC3H1-212ENST00000552994 CCER1Q8TC90 406 aaPredicted RBP18.69■□□□□ 0.58
ZFC3H1-212ENST00000552994 ATP1B4Q9UN42 357 aaPredicted RBP18.62■□□□□ 0.57
ZFC3H1-212ENST00000552994 TTBK1Q5TCY1 1321 aaPredicted RBP18.6■□□□□ 0.57
ZFC3H1-212ENST00000552994 CENPBP07199 599 aaPredicted RBP18.59■□□□□ 0.57
ZFC3H1-212ENST00000552994 RANGAP1P46060 587 aaPredicted RBP18.51■□□□□ 0.55
ZFC3H1-212ENST00000552994 NISCHQ9Y2I1 1504 aa18.51■□□□□ 0.55
ZFC3H1-212ENST00000552994 ZEB1P37275 1124 aaPredicted RBP18.44■□□□□ 0.54
ZFC3H1-212ENST00000552994 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
ZFC3H1-212ENST00000552994 MYT1LQ9UL68 1186 aa18.25■□□□□ 0.51
ZFC3H1-212ENST00000552994 NEFLP07196 543 aa18.24■□□□□ 0.51
ZFC3H1-212ENST00000552994 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
ZFC3H1-212ENST00000552994 TRIM41Q8WV44 630 aa18.05■□□□□ 0.48
ZFC3H1-212ENST00000552994 DAXXQ9UER7 740 aaPredicted RBP18.03■□□□□ 0.48
ZFC3H1-212ENST00000552994 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.94■□□□□ 0.46
ZFC3H1-212ENST00000552994 HNRNPUL2Q1KMD3 747 aaKnown RBP17.94■□□□□ 0.46
ZFC3H1-212ENST00000552994 CHIC1Q5VXU3 224 aa17.88■□□□□ 0.45
ZFC3H1-212ENST00000552994 POLR3GLQ9BT43 218 aa17.88■□□□□ 0.45
ZFC3H1-212ENST00000552994 HRCP23327 699 aa17.83■□□□□ 0.45
ZFC3H1-212ENST00000552994 SLC4A1APQ9BWU0 796 aaKnown RBP17.83■□□□□ 0.45
ZFC3H1-212ENST00000552994 YTHDC1Q96MU7 727 aaKnown RBP17.83■□□□□ 0.44
ZFC3H1-212ENST00000552994 ITGAEP38570 1179 aa17.63■□□□□ 0.41
ZFC3H1-212ENST00000552994 TRIM26Q12899 539 aaPredicted RBP17.61■□□□□ 0.41
ZFC3H1-212ENST00000552994 CNGB1Q14028 1251 aaPredicted RBP17.59■□□□□ 0.41
ZFC3H1-212ENST00000552994 CLSPNQ9HAW4 1339 aa17.54■□□□□ 0.4
ZFC3H1-212ENST00000552994 ZNF316A6NFI3 1004 aaPredicted RBP17.52■□□□□ 0.39
ZFC3H1-212ENST00000552994 PPARGC1BQ86YN6 1023 aaKnown RBP17.52■□□□□ 0.39
ZFC3H1-212ENST00000552994 ZBTB47Q9UFB7 747 aaPredicted RBP17.38■□□□□ 0.37
ZFC3H1-212ENST00000552994 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
ZFC3H1-212ENST00000552994 RTL5Q5HYW3 569 aaPredicted RBP17.32■□□□□ 0.36
ZFC3H1-212ENST00000552994 BCANQ96GW7 911 aa17.26■□□□□ 0.35
ZFC3H1-212ENST00000552994 DIEXFQ68CQ4 756 aaKnown RBP17.2■□□□□ 0.34
ZFC3H1-212ENST00000552994 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
ZFC3H1-212ENST00000552994 FAM50AQ14320 339 aaKnown RBP17.17■□□□□ 0.34
ZFC3H1-212ENST00000552994 NEFMP07197 916 aa17.15■□□□□ 0.34
ZFC3H1-212ENST00000552994 GTF3C3Q9Y5Q9 886 aa17.13■□□□□ 0.33
ZFC3H1-212ENST00000552994 BCL11AQ9H165 835 aa17.09■□□□□ 0.33
ZFC3H1-212ENST00000552994 CANXP27824 592 aaKnown RBP17.06■□□□□ 0.32
ZFC3H1-212ENST00000552994 FBLN2P98095 1184 aa17.05■□□□□ 0.32
ZFC3H1-212ENST00000552994 ZNF326Q5BKZ1 582 aaKnown RBP17.01■□□□□ 0.31
ZFC3H1-212ENST00000552994 ESF1Q9H501 851 aaKnown RBP17■□□□□ 0.31
ZFC3H1-212ENST00000552994 NEUROD1Q13562 356 aa16.96■□□□□ 0.3
ZFC3H1-212ENST00000552994 ACIN1Q9UKV3 1341 aaKnown RBP16.93■□□□□ 0.3
ZFC3H1-212ENST00000552994 CDK11AQ9UQ88 783 aaPredicted RBP16.9■□□□□ 0.3
ZFC3H1-212ENST00000552994 LOC105371045A0A1W2PR82 267 aa16.87■□□□□ 0.29
ZFC3H1-212ENST00000552994 ANP32CO43423 234 aa16.86■□□□□ 0.29
ZFC3H1-212ENST00000552994 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
ZFC3H1-212ENST00000552994 STAG3Q9UJ98 1225 aa16.83■□□□□ 0.28
ZFC3H1-212ENST00000552994 GLIPR1L2Q4G1C9 344 aa16.74■□□□□ 0.27
ZFC3H1-212ENST00000552994 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
ZFC3H1-212ENST00000552994 ANP32BQ92688 251 aaKnown RBP16.72■□□□□ 0.27
ZFC3H1-212ENST00000552994 HSP90AA1P07900 732 aaKnown RBP16.69■□□□□ 0.26
ZFC3H1-212ENST00000552994 NPM1P06748 294 aaKnown RBP eCLIP16.66■□□□□ 0.26
ZFC3H1-212ENST00000552994 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
ZFC3H1-212ENST00000552994 ZNF777Q9ULD5 760 aaPredicted RBP16.66■□□□□ 0.26
ZFC3H1-212ENST00000552994 SCAF1Q9H7N4 1312 aaKnown RBP16.65■□□□□ 0.26
ZFC3H1-212ENST00000552994 ANP32AP39687 249 aaKnown RBP16.65■□□□□ 0.26
ZFC3H1-212ENST00000552994 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
ZFC3H1-212ENST00000552994 EIF5BO60841 1220 aaKnown RBP16.63■□□□□ 0.25
ZFC3H1-212ENST00000552994 ARID3CA6NKF2 412 aa16.63■□□□□ 0.25
ZFC3H1-212ENST00000552994 A0A0G2JS52 829 aa16.62■□□□□ 0.25
ZFC3H1-212ENST00000552994 ABCC9O60706 1549 aa16.6■□□□□ 0.25
ZFC3H1-212ENST00000552994 NPM2Q86SE8 214 aaKnown RBP16.56■□□□□ 0.24
ZFC3H1-212ENST00000552994 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
ZFC3H1-212ENST00000552994 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
ZFC3H1-212ENST00000552994 ZBTB7CA1YPR0 619 aa16.38■□□□□ 0.21
ZFC3H1-212ENST00000552994 FKBP8Q14318 412 aa16.37■□□□□ 0.21
ZFC3H1-212ENST00000552994 C14orf37Q86TY3 774 aa16.36■□□□□ 0.21
ZFC3H1-212ENST00000552994 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
ZFC3H1-212ENST00000552994 MYH16Q9H6N6 1097 aa16.35■□□□□ 0.21
ZFC3H1-212ENST00000552994 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.34■□□□□ 0.21
ZFC3H1-212ENST00000552994 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.34■□□□□ 0.211e-9■■■□□ 15.9
ZFC3H1-212ENST00000552994 PLEKHG5O94827 1062 aa16.33■□□□□ 0.2
ZFC3H1-212ENST00000552994 DCAF1Q9Y4B6 1507 aa16.3■□□□□ 0.2
ZFC3H1-212ENST00000552994 WDR43Q15061 677 aaKnown RBP eCLIP16.3■□□□□ 0.21e-6■□□□□ 9.5
ZFC3H1-212ENST00000552994 TONSLQ96HA7 1378 aa16.3■□□□□ 0.2
ZFC3H1-212ENST00000552994 ANP32EQ9BTT0 268 aa16.29■□□□□ 0.2
ZFC3H1-212ENST00000552994 SALL2Q9Y467 1007 aaPredicted RBP16.26■□□□□ 0.19
ZFC3H1-212ENST00000552994 PPP1R15AO75807 674 aaPredicted RBP16.25■□□□□ 0.19
ZFC3H1-212ENST00000552994 ARXQ96QS3 562 aa16.24■□□□□ 0.19
ZFC3H1-212ENST00000552994 NBR1Q14596 966 aa16.24■□□□□ 0.19
ZFC3H1-212ENST00000552994 TULP1O00294 542 aaPredicted RBP16.24■□□□□ 0.19
ZFC3H1-212ENST00000552994 TMC1Q8TDI8 760 aa16.23■□□□□ 0.19
ZFC3H1-212ENST00000552994 NPHP1O15259 732 aa16.21■□□□□ 0.19
ZFC3H1-212ENST00000552994 FAM9BQ8IZU0 186 aa16.2■□□□□ 0.18
ZFC3H1-212ENST00000552994 ARID4BQ4LE39 1312 aaPredicted RBP16.17■□□□□ 0.18
ZFC3H1-212ENST00000552994 TSPY4P0CV99 314 aa16.17■□□□□ 0.18
ZFC3H1-212ENST00000552994 TSPY10P0CW01 314 aa16.17■□□□□ 0.18
ZFC3H1-212ENST00000552994 NCLP19338 710 aaKnown RBP16.16■□□□□ 0.18
ZFC3H1-212ENST00000552994 HNRNPUQ00839 825 aaKnown RBP eCLIP16.16■□□□□ 0.18
ZFC3H1-212ENST00000552994 ZRSR1Q15695 479 aaKnown RBP16.14■□□□□ 0.17
ZFC3H1-212ENST00000552994 KDM2AQ9Y2K7 1162 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms