RNA–Protein interactions for RNA: ENST00000396840.6

IFFO1-204, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene IFFO1, Length 2,677 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-204ENST00000396840 NISCHQ9Y2I1 1504 aa37.5■■■■□ 3.59
IFFO1-204ENST00000396840 SHROOM4Q9ULL8 1493 aa32.55■■■□□ 2.8
IFFO1-204ENST00000396840 SUPT5HO00267 1087 aaKnown RBP31.98■■■□□ 2.71
IFFO1-204ENST00000396840 ZCCHC6Q5VYS8 1495 aaKnown RBP31.71■■■□□ 2.67
IFFO1-204ENST00000396840 CCDC180Q9P1Z9 1646 aa31.63■■■□□ 2.65
IFFO1-204ENST00000396840 DCAF8L2P0C7V8 631 aa31.59■■■□□ 2.65
IFFO1-204ENST00000396840 CHIC1Q5VXU3 224 aa30.95■■■□□ 2.55
IFFO1-204ENST00000396840 MYO15BQ96JP2 1530 aa30.92■■■□□ 2.54
IFFO1-204ENST00000396840 DCAF1Q9Y4B6 1507 aa30.54■■■□□ 2.48
IFFO1-204ENST00000396840 PCGF6Q9BYE7 350 aa30.35■■■□□ 2.45
IFFO1-204ENST00000396840 HRCP23327 699 aa30.26■■■□□ 2.43
IFFO1-204ENST00000396840 LOC105371045A0A1W2PR82 267 aa30.24■■■□□ 2.43
IFFO1-204ENST00000396840 SCRIBQ14160 1630 aa30.02■■■□□ 2.4
IFFO1-204ENST00000396840 ABCC9O60706 1549 aa29.96■■■□□ 2.39
IFFO1-204ENST00000396840 PPARGC1BQ86YN6 1023 aaKnown RBP29.87■■■□□ 2.37
IFFO1-204ENST00000396840 RSF1Q96T23 1441 aaPredicted RBP29.82■■■□□ 2.36
IFFO1-204ENST00000396840 TRIM41Q8WV44 630 aa29.64■■■□□ 2.33
IFFO1-204ENST00000396840 FAM9AQ8IZU1 332 aaPredicted RBP29.63■■■□□ 2.33
IFFO1-204ENST00000396840 RB1CC1Q8TDY2 1594 aa29.59■■■□□ 2.33
IFFO1-204ENST00000396840 EHMT2Q96KQ7 1210 aa29.57■■■□□ 2.32
IFFO1-204ENST00000396840 TRIM26Q12899 539 aaPredicted RBP29.52■■■□□ 2.32
IFFO1-204ENST00000396840 CECR2Q9BXF3 1484 aa29.41■■■□□ 2.3
IFFO1-204ENST00000396840 NACADO15069 1562 aa29.27■■■□□ 2.28
IFFO1-204ENST00000396840 MROH2BQ7Z745 1585 aa29.27■■■□□ 2.28
IFFO1-204ENST00000396840 WIZO95785 1651 aa29.15■■■□□ 2.26
IFFO1-204ENST00000396840 ZEB1P37275 1124 aaPredicted RBP28.82■■■□□ 2.2
IFFO1-204ENST00000396840 BAZ1AQ9NRL2 1556 aaPredicted RBP28.81■■■□□ 2.2
IFFO1-204ENST00000396840 ABCC8Q09428 1581 aa28.64■■■□□ 2.17
IFFO1-204ENST00000396840 EIF4G1Q04637 1599 aaKnown RBP28.62■■■□□ 2.17
IFFO1-204ENST00000396840 TTBK1Q5TCY1 1321 aaPredicted RBP28.61■■■□□ 2.17
IFFO1-204ENST00000396840 CCDC88BA6NC98 1476 aa28.54■■■□□ 2.16
IFFO1-204ENST00000396840 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
IFFO1-204ENST00000396840 SMARCA4P51532 1647 aa28.53■■■□□ 2.16
IFFO1-204ENST00000396840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.53■■■□□ 2.16
IFFO1-204ENST00000396840 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
IFFO1-204ENST00000396840 UNC13AQ9UPW8 1703 aa28.47■■■□□ 2.15
IFFO1-204ENST00000396840 SMARCA2P51531 1590 aa28.44■■■□□ 2.14
IFFO1-204ENST00000396840 CCER1Q8TC90 406 aaPredicted RBP28.4■■■□□ 2.14
IFFO1-204ENST00000396840 SOGA1O94964 1423 aa28.39■■■□□ 2.14
IFFO1-204ENST00000396840 CEP162Q5TB80 1403 aa28.27■■■□□ 2.12
IFFO1-204ENST00000396840 UBTFP17480 764 aaKnown RBP28.27■■■□□ 2.12
IFFO1-204ENST00000396840 RUSC2Q8N2Y8 1516 aa28.27■■■□□ 2.12
IFFO1-204ENST00000396840 CSRNP3Q8WYN3 585 aa28.21■■■□□ 2.11
IFFO1-204ENST00000396840 TNIKQ9UKE5 1360 aa28.12■■■□□ 2.09
IFFO1-204ENST00000396840 WRNQ14191 1432 aaPredicted RBP eCLIP28.1■■■□□ 2.09
IFFO1-204ENST00000396840 BICRAQ9NZM4 1560 aa28.09■■■□□ 2.09
IFFO1-204ENST00000396840 SCAF1Q9H7N4 1312 aaKnown RBP28.07■■■□□ 2.08
IFFO1-204ENST00000396840 EEA1Q15075 1411 aa27.99■■■□□ 2.07
IFFO1-204ENST00000396840 GOLGA3Q08378 1498 aa27.95■■■□□ 2.06
IFFO1-204ENST00000396840 RANGAP1P46060 587 aaPredicted RBP27.93■■■□□ 2.06
IFFO1-204ENST00000396840 SYNJ1O43426 1573 aa27.88■■■□□ 2.05
IFFO1-204ENST00000396840 DIEXFQ68CQ4 756 aaKnown RBP27.87■■■□□ 2.05
IFFO1-204ENST00000396840 PEG3Q9GZU2 1588 aa27.82■■■□□ 2.04
IFFO1-204ENST00000396840 HNRNPUL2Q1KMD3 747 aaKnown RBP27.8■■■□□ 2.04
IFFO1-204ENST00000396840 ATAD2BQ9ULI0 1458 aa27.79■■■□□ 2.04
IFFO1-204ENST00000396840 BAZ1BQ9UIG0 1483 aaKnown RBP27.78■■■□□ 2.04
IFFO1-204ENST00000396840 CEP164Q9UPV0 1460 aa27.75■■■□□ 2.03
IFFO1-204ENST00000396840 NEUROD1Q13562 356 aa27.73■■■□□ 2.03
IFFO1-204ENST00000396840 CLIP1P30622 1438 aa27.72■■■□□ 2.03
IFFO1-204ENST00000396840 ACIN1Q9UKV3 1341 aaKnown RBP27.68■■■□□ 2.02
IFFO1-204ENST00000396840 RAPGEF2Q9Y4G8 1499 aa27.65■■■□□ 2.02
IFFO1-204ENST00000396840 KIF21BO75037 1637 aa27.64■■■□□ 2.01
IFFO1-204ENST00000396840 APLP2Q06481 763 aa27.62■■■□□ 2.01
IFFO1-204ENST00000396840 PELP1Q8IZL8 1130 aaKnown RBP27.58■■■□□ 2.01
IFFO1-204ENST00000396840 ZNF316A6NFI3 1004 aaPredicted RBP27.56■■■□□ 2
IFFO1-204ENST00000396840 VPS8Q8N3P4 1428 aa27.55■■■□□ 2
IFFO1-204ENST00000396840 CENPBP07199 599 aaPredicted RBP27.48■■□□□ 1.99
IFFO1-204ENST00000396840 GTF3C3Q9Y5Q9 886 aa27.48■■□□□ 1.99
IFFO1-204ENST00000396840 YTHDC1Q96MU7 727 aaKnown RBP27.44■■□□□ 1.98
IFFO1-204ENST00000396840 TOP2BQ02880 1626 aa27.42■■□□□ 1.98
IFFO1-204ENST00000396840 MIER1Q8N108 512 aa27.29■■□□□ 1.96
IFFO1-204ENST00000396840 BIVM-ERCC5R4GMW8 1640 aa27.26■■□□□ 1.95
IFFO1-204ENST00000396840 KANK4Q5T7N3 995 aaPredicted RBP27.26■■□□□ 1.95
IFFO1-204ENST00000396840 PRXQ9BXM0 1461 aa27.22■■□□□ 1.95
IFFO1-204ENST00000396840 CUX1P39880 1505 aa27.21■■□□□ 1.95
IFFO1-204ENST00000396840 ARAP1Q96P48 1450 aa27.2■■□□□ 1.94
IFFO1-204ENST00000396840 ERICH3Q5RHP9 1530 aa27.15■■□□□ 1.94
IFFO1-204ENST00000396840 NCAPD3P42695 1498 aa27.14■■□□□ 1.94
IFFO1-204ENST00000396840 KIF27Q86VH2 1401 aa27.12■■□□□ 1.93
IFFO1-204ENST00000396840 ITGAEP38570 1179 aa27.1■■□□□ 1.93
IFFO1-204ENST00000396840 HMGXB3Q12766 1538 aa27.09■■□□□ 1.93
IFFO1-204ENST00000396840 DHX57Q6P158 1386 aaKnown RBP27.04■■□□□ 1.92
IFFO1-204ENST00000396840 CFTRP13569 1480 aa27.01■■□□□ 1.91
IFFO1-204ENST00000396840 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.91
IFFO1-204ENST00000396840 CUX2O14529 1486 aa26.91■■□□□ 1.9
IFFO1-204ENST00000396840 RRBP1Q9P2E9 1410 aaKnown RBP26.88■■□□□ 1.89
IFFO1-204ENST00000396840 CCNB3Q8WWL7 1395 aa26.87■■□□□ 1.89
IFFO1-204ENST00000396840 CLSPNQ9HAW4 1339 aa26.86■■□□□ 1.89
IFFO1-204ENST00000396840 IGF1RP08069 1367 aa26.84■■□□□ 1.89
IFFO1-204ENST00000396840 P3H3Q8IVL6 736 aa26.82■■□□□ 1.88
IFFO1-204ENST00000396840 ATP1B4Q9UN42 357 aaPredicted RBP26.8■■□□□ 1.88
IFFO1-204ENST00000396840 CARMIL1Q5VZK9 1371 aa26.75■■□□□ 1.87
IFFO1-204ENST00000396840 CADPSQ9ULU8 1353 aa26.74■■□□□ 1.87
IFFO1-204ENST00000396840 FGD5Q6ZNL6 1462 aa26.74■■□□□ 1.87
IFFO1-204ENST00000396840 RAB3GAP2Q9H2M9 1393 aa26.7■■□□□ 1.86
IFFO1-204ENST00000396840 FAM50AQ14320 339 aaKnown RBP26.69■■□□□ 1.86
IFFO1-204ENST00000396840 PRDM2Q13029 1718 aa26.67■■□□□ 1.86
IFFO1-204ENST00000396840 TIAM1Q13009 1591 aa26.64■■□□□ 1.85
IFFO1-204ENST00000396840 PHLDB1Q86UU1 1377 aa26.61■■□□□ 1.85
IFFO1-204ENST00000396840 LRRC9Q6ZRR7 1453 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms