RNA–Protein interactions for RNA: ENST00000488007.5

IFFO1-210, Transcript of intermediate filament family orphan 1, humanhuman

TSL 5

Gene IFFO1, Length 3,001 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-210ENST00000488007 NISCHQ9Y2I1 1504 aa24.97■■□□□ 1.59
IFFO1-210ENST00000488007 HRCP23327 699 aa24.31■■□□□ 1.48
IFFO1-210ENST00000488007 PPARGC1BQ86YN6 1023 aaKnown RBP24.14■■□□□ 1.46
IFFO1-210ENST00000488007 PELP1Q8IZL8 1130 aaKnown RBP24■■□□□ 1.43
IFFO1-210ENST00000488007 PCGF6Q9BYE7 350 aa23.86■■□□□ 1.41
IFFO1-210ENST00000488007 SUPT5HO00267 1087 aaKnown RBP23.43■■□□□ 1.34
IFFO1-210ENST00000488007 SCAF1Q9H7N4 1312 aaKnown RBP23.41■■□□□ 1.34
IFFO1-210ENST00000488007 SHROOM4Q9ULL8 1493 aa23.3■■□□□ 1.32
IFFO1-210ENST00000488007 MYO15BQ96JP2 1530 aa23.14■■□□□ 1.3
IFFO1-210ENST00000488007 MYT1Q01538 1121 aa23.11■■□□□ 1.29
IFFO1-210ENST00000488007 CHIC1Q5VXU3 224 aa22.89■■□□□ 1.25
IFFO1-210ENST00000488007 LOC105371045A0A1W2PR82 267 aa22.7■■□□□ 1.22
IFFO1-210ENST00000488007 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
IFFO1-210ENST00000488007 NEUROD1Q13562 356 aa22.63■■□□□ 1.21
IFFO1-210ENST00000488007 GTF3C3Q9Y5Q9 886 aa22.6■■□□□ 1.21
IFFO1-210ENST00000488007 ACIN1Q9UKV3 1341 aaKnown RBP22.59■■□□□ 1.21
IFFO1-210ENST00000488007 ZEB1P37275 1124 aaPredicted RBP22.5■■□□□ 1.19
IFFO1-210ENST00000488007 DCAF1Q9Y4B6 1507 aa22.47■■□□□ 1.19
IFFO1-210ENST00000488007 DCAF8L2P0C7V8 631 aa22.39■■□□□ 1.17
IFFO1-210ENST00000488007 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
IFFO1-210ENST00000488007 CENPBP07199 599 aaPredicted RBP22.24■■□□□ 1.15
IFFO1-210ENST00000488007 YTHDC1Q96MU7 727 aaKnown RBP22.05■■□□□ 1.12
IFFO1-210ENST00000488007 DIEXFQ68CQ4 756 aaKnown RBP22.02■■□□□ 1.12
IFFO1-210ENST00000488007 EHMT2Q96KQ7 1210 aa21.99■■□□□ 1.11
IFFO1-210ENST00000488007 BCL11AQ9H165 835 aa21.97■■□□□ 1.11
IFFO1-210ENST00000488007 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.94■■□□□ 1.1
IFFO1-210ENST00000488007 CCER1Q8TC90 406 aaPredicted RBP21.86■■□□□ 1.09
IFFO1-210ENST00000488007 FAM9AQ8IZU1 332 aaPredicted RBP21.83■■□□□ 1.09
IFFO1-210ENST00000488007 TTBK1Q5TCY1 1321 aaPredicted RBP21.69■■□□□ 1.06
IFFO1-210ENST00000488007 ANP32EQ9BTT0 268 aa21.55■■□□□ 1.04
IFFO1-210ENST00000488007 CSRNP3Q8WYN3 585 aa21.49■■□□□ 1.03
IFFO1-210ENST00000488007 MIER1Q8N108 512 aa21.45■■□□□ 1.02
IFFO1-210ENST00000488007 TRIM41Q8WV44 630 aa21.42■■□□□ 1.02
IFFO1-210ENST00000488007 PRKCSHP14314 528 aaPredicted RBP21.41■■□□□ 1.02
IFFO1-210ENST00000488007 ZNF316A6NFI3 1004 aaPredicted RBP21.37■■□□□ 1.01
IFFO1-210ENST00000488007 TSHZ2Q9NRE2 1034 aa21.31■■□□□ 1
IFFO1-210ENST00000488007 ZCCHC6Q5VYS8 1495 aaKnown RBP21.27■□□□□ 0.99
IFFO1-210ENST00000488007 SUPT16HQ9Y5B9 1047 aaKnown RBP21.26■□□□□ 0.99
IFFO1-210ENST00000488007 BCANQ96GW7 911 aa21.09■□□□□ 0.97
IFFO1-210ENST00000488007 HNRNPUL2Q1KMD3 747 aaKnown RBP20.8■□□□□ 0.92
IFFO1-210ENST00000488007 CLSPNQ9HAW4 1339 aa20.79■□□□□ 0.92
IFFO1-210ENST00000488007 RBM19Q9Y4C8 960 aaKnown RBP20.79■□□□□ 0.92
IFFO1-210ENST00000488007 FKBP8Q14318 412 aa20.73■□□□□ 0.91
IFFO1-210ENST00000488007 ITGAEP38570 1179 aa20.72■□□□□ 0.91
IFFO1-210ENST00000488007 ERICH6Q7L0X2 663 aa20.7■□□□□ 0.9
IFFO1-210ENST00000488007 ANO8Q9HCE9 1232 aaPredicted RBP20.67■□□□□ 0.9
IFFO1-210ENST00000488007 MSH5O43196 834 aa20.66■□□□□ 0.9
IFFO1-210ENST00000488007 KCNH8Q96L42 1107 aa20.63■□□□□ 0.89
IFFO1-210ENST00000488007 RB1CC1Q8TDY2 1594 aa20.49■□□□□ 0.87
IFFO1-210ENST00000488007 DEKP35659 375 aaKnown RBP20.48■□□□□ 0.87
IFFO1-210ENST00000488007 NEFLP07196 543 aa20.47■□□□□ 0.87
IFFO1-210ENST00000488007 CCDC136Q96JN2 1154 aa20.45■□□□□ 0.87
IFFO1-210ENST00000488007 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
IFFO1-210ENST00000488007 SALL2Q9Y467 1007 aaPredicted RBP20.4■□□□□ 0.86
IFFO1-210ENST00000488007 APLP2Q06481 763 aa20.37■□□□□ 0.85
IFFO1-210ENST00000488007 CEP162Q5TB80 1403 aa20.36■□□□□ 0.85
IFFO1-210ENST00000488007 UBTFP17480 764 aaKnown RBP20.36■□□□□ 0.85
IFFO1-210ENST00000488007 NBR1Q14596 966 aa20.32■□□□□ 0.84
IFFO1-210ENST00000488007 TRIM52Q96A61 297 aa20.32■□□□□ 0.84
IFFO1-210ENST00000488007 RANGAP1P46060 587 aaPredicted RBP20.32■□□□□ 0.84
IFFO1-210ENST00000488007 WRNQ14191 1432 aaPredicted RBP eCLIP20.29■□□□□ 0.84
IFFO1-210ENST00000488007 ABCC9O60706 1549 aa20.28■□□□□ 0.84
IFFO1-210ENST00000488007 IRX6P78412 446 aaPredicted RBP20.27■□□□□ 0.83
IFFO1-210ENST00000488007 RTN4Q9NQC3 1192 aaKnown RBP20.27■□□□□ 0.83
IFFO1-210ENST00000488007 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
IFFO1-210ENST00000488007 FANCIQ9NVI1 1328 aa20.19■□□□□ 0.82
IFFO1-210ENST00000488007 CDK11AQ9UQ88 783 aaPredicted RBP20.19■□□□□ 0.82
IFFO1-210ENST00000488007 DDX10Q13206 875 aaKnown RBP20.15■□□□□ 0.82
IFFO1-210ENST00000488007 SCRIBQ14160 1630 aa20.15■□□□□ 0.82
IFFO1-210ENST00000488007 IL27Q8NEV9 243 aa20.11■□□□□ 0.81
IFFO1-210ENST00000488007 MYT1LQ9UL68 1186 aa20.1■□□□□ 0.81
IFFO1-210ENST00000488007 TNIKQ9UKE5 1360 aa20.03■□□□□ 0.8
IFFO1-210ENST00000488007 HIRIP3Q9BW71 556 aaPredicted RBP20.02■□□□□ 0.8
IFFO1-210ENST00000488007 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
IFFO1-210ENST00000488007 PAK3O75914 559 aaPredicted RBP20■□□□□ 0.79
IFFO1-210ENST00000488007 SOGA1O94964 1423 aa19.99■□□□□ 0.79
IFFO1-210ENST00000488007 ABCC8Q09428 1581 aa19.97■□□□□ 0.79
IFFO1-210ENST00000488007 CCDC88BA6NC98 1476 aa19.96■□□□□ 0.79
IFFO1-210ENST00000488007 NOP58Q9Y2X3 529 aaKnown RBP19.95■□□□□ 0.78
IFFO1-210ENST00000488007 RTL5Q5HYW3 569 aaPredicted RBP19.92■□□□□ 0.78
IFFO1-210ENST00000488007 ERICH6BQ5W0A0 696 aa19.92■□□□□ 0.78
IFFO1-210ENST00000488007 CECR2Q9BXF3 1484 aa19.92■□□□□ 0.78
IFFO1-210ENST00000488007 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
IFFO1-210ENST00000488007 UBE2Q2Q8WVN8 375 aa19.92■□□□□ 0.78
IFFO1-210ENST00000488007 RUSC2Q8N2Y8 1516 aa19.87■□□□□ 0.77
IFFO1-210ENST00000488007 B4GALNT3Q6L9W6 998 aa19.86■□□□□ 0.77
IFFO1-210ENST00000488007 ANP32CO43423 234 aa19.84■□□□□ 0.77
IFFO1-210ENST00000488007 HNRNPUQ00839 825 aaKnown RBP eCLIP19.84■□□□□ 0.77
IFFO1-210ENST00000488007 CLIP1P30622 1438 aa19.73■□□□□ 0.75
IFFO1-210ENST00000488007 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
IFFO1-210ENST00000488007 PPP4R2Q9NY27 417 aa19.71■□□□□ 0.75
IFFO1-210ENST00000488007 MROH2BQ7Z745 1585 aa19.71■□□□□ 0.75
IFFO1-210ENST00000488007 GOLGA3Q08378 1498 aa19.71■□□□□ 0.75
IFFO1-210ENST00000488007 SIN3AQ96ST3 1273 aa19.69■□□□□ 0.74
IFFO1-210ENST00000488007 WIZO95785 1651 aa19.69■□□□□ 0.74
IFFO1-210ENST00000488007 CCER2I3L3R5 266 aa19.68■□□□□ 0.74
IFFO1-210ENST00000488007 ZBTB47Q9UFB7 747 aaPredicted RBP19.68■□□□□ 0.74
IFFO1-210ENST00000488007 ANP32AP39687 249 aaKnown RBP19.66■□□□□ 0.74
IFFO1-210ENST00000488007 LAS1LQ9Y4W2 734 aaKnown RBP19.65■□□□□ 0.74
IFFO1-210ENST00000488007 VPS8Q8N3P4 1428 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms