RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 NISCHQ9Y2I1 1504 aa27.27■■□□□ 1.96
IFFO1-208ENST00000472558 SHROOM4Q9ULL8 1493 aa23.72■■□□□ 1.39
IFFO1-208ENST00000472558 HRCP23327 699 aa23.68■■□□□ 1.38
IFFO1-208ENST00000472558 SUPT5HO00267 1087 aaKnown RBP23.55■■□□□ 1.36
IFFO1-208ENST00000472558 CCDC180Q9P1Z9 1646 aa23.5■■□□□ 1.35
IFFO1-208ENST00000472558 MYO15BQ96JP2 1530 aa23.39■■□□□ 1.33
IFFO1-208ENST00000472558 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
IFFO1-208ENST00000472558 PCGF6Q9BYE7 350 aa23.27■■□□□ 1.32
IFFO1-208ENST00000472558 CHIC1Q5VXU3 224 aa23.18■■□□□ 1.3
IFFO1-208ENST00000472558 DCAF8L2P0C7V8 631 aa23.13■■□□□ 1.29
IFFO1-208ENST00000472558 ZCCHC6Q5VYS8 1495 aaKnown RBP22.87■■□□□ 1.25
IFFO1-208ENST00000472558 ABCC9O60706 1549 aa22.8■■□□□ 1.24
IFFO1-208ENST00000472558 DCAF1Q9Y4B6 1507 aa22.74■■□□□ 1.23
IFFO1-208ENST00000472558 LOC105371045A0A1W2PR82 267 aa22.67■■□□□ 1.22
IFFO1-208ENST00000472558 TRIM26Q12899 539 aaPredicted RBP22.5■■□□□ 1.19
IFFO1-208ENST00000472558 PELP1Q8IZL8 1130 aaKnown RBP22.49■■□□□ 1.19
IFFO1-208ENST00000472558 SCAF1Q9H7N4 1312 aaKnown RBP22.39■■□□□ 1.17
IFFO1-208ENST00000472558 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
IFFO1-208ENST00000472558 SCRIBQ14160 1630 aa22.08■■□□□ 1.13
IFFO1-208ENST00000472558 NACADO15069 1562 aa21.97■■□□□ 1.11
IFFO1-208ENST00000472558 RB1CC1Q8TDY2 1594 aa21.85■■□□□ 1.09
IFFO1-208ENST00000472558 ACIN1Q9UKV3 1341 aaKnown RBP21.82■■□□□ 1.08
IFFO1-208ENST00000472558 NEUROD1Q13562 356 aa21.82■■□□□ 1.08
IFFO1-208ENST00000472558 FAM9AQ8IZU1 332 aaPredicted RBP21.79■■□□□ 1.08
IFFO1-208ENST00000472558 TRIM41Q8WV44 630 aa21.76■■□□□ 1.07
IFFO1-208ENST00000472558 EHMT2Q96KQ7 1210 aa21.71■■□□□ 1.07
IFFO1-208ENST00000472558 PABPN1Q86U42 306 aaKnown RBP eCLIP21.68■■□□□ 1.06
IFFO1-208ENST00000472558 MYT1Q01538 1121 aa21.65■■□□□ 1.06
IFFO1-208ENST00000472558 GTF3C3Q9Y5Q9 886 aa21.65■■□□□ 1.06
IFFO1-208ENST00000472558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.62■■□□□ 1.05
IFFO1-208ENST00000472558 RSF1Q96T23 1441 aaPredicted RBP21.61■■□□□ 1.05
IFFO1-208ENST00000472558 UNC13AQ9UPW8 1703 aa21.54■■□□□ 1.04
IFFO1-208ENST00000472558 DIEXFQ68CQ4 756 aaKnown RBP21.49■■□□□ 1.03
IFFO1-208ENST00000472558 CCER1Q8TC90 406 aaPredicted RBP21.49■■□□□ 1.03
IFFO1-208ENST00000472558 CECR2Q9BXF3 1484 aa21.45■■□□□ 1.02
IFFO1-208ENST00000472558 CENPBP07199 599 aaPredicted RBP21.43■■□□□ 1.02
IFFO1-208ENST00000472558 BICRAQ9NZM4 1560 aa21.33■■□□□ 1.01
IFFO1-208ENST00000472558 MROH2BQ7Z745 1585 aa21.23■□□□□ 0.99
IFFO1-208ENST00000472558 TTBK1Q5TCY1 1321 aaPredicted RBP21.17■□□□□ 0.98
IFFO1-208ENST00000472558 YTHDC1Q96MU7 727 aaKnown RBP21.15■□□□□ 0.98
IFFO1-208ENST00000472558 ZNF316A6NFI3 1004 aaPredicted RBP21.1■□□□□ 0.97
IFFO1-208ENST00000472558 WIZO95785 1651 aa21.07■□□□□ 0.96
IFFO1-208ENST00000472558 MIER1Q8N108 512 aa21.01■□□□□ 0.95
IFFO1-208ENST00000472558 WRNQ14191 1432 aaPredicted RBP eCLIP21■□□□□ 0.95
IFFO1-208ENST00000472558 BAZ1AQ9NRL2 1556 aaPredicted RBP20.98■□□□□ 0.95
IFFO1-208ENST00000472558 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
IFFO1-208ENST00000472558 EIF4G1Q04637 1599 aaKnown RBP20.92■□□□□ 0.94
IFFO1-208ENST00000472558 CEP162Q5TB80 1403 aa20.91■□□□□ 0.94
IFFO1-208ENST00000472558 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
IFFO1-208ENST00000472558 ABCC8Q09428 1581 aa20.81■□□□□ 0.92
IFFO1-208ENST00000472558 TNIKQ9UKE5 1360 aa20.76■□□□□ 0.91
IFFO1-208ENST00000472558 SOGA1O94964 1423 aa20.76■□□□□ 0.91
IFFO1-208ENST00000472558 HNRNPUL2Q1KMD3 747 aaKnown RBP20.7■□□□□ 0.9
IFFO1-208ENST00000472558 RUSC2Q8N2Y8 1516 aa20.67■□□□□ 0.9
IFFO1-208ENST00000472558 ATAD2BQ9ULI0 1458 aa20.66■□□□□ 0.9
IFFO1-208ENST00000472558 SUPT16HQ9Y5B9 1047 aaKnown RBP20.64■□□□□ 0.9
IFFO1-208ENST00000472558 UBTFP17480 764 aaKnown RBP20.64■□□□□ 0.89
IFFO1-208ENST00000472558 TOP2AP11388 1531 aaKnown RBP20.64■□□□□ 0.89
IFFO1-208ENST00000472558 CSRNP3Q8WYN3 585 aa20.6■□□□□ 0.89
IFFO1-208ENST00000472558 BAZ1BQ9UIG0 1483 aaKnown RBP20.56■□□□□ 0.88
IFFO1-208ENST00000472558 SMARCA2P51531 1590 aa20.53■□□□□ 0.88
IFFO1-208ENST00000472558 TSHZ2Q9NRE2 1034 aa20.53■□□□□ 0.88
IFFO1-208ENST00000472558 PEG3Q9GZU2 1588 aa20.51■□□□□ 0.87
IFFO1-208ENST00000472558 GOLGA3Q08378 1498 aa20.49■□□□□ 0.87
IFFO1-208ENST00000472558 EEA1Q15075 1411 aa20.48■□□□□ 0.87
IFFO1-208ENST00000472558 ANP32EQ9BTT0 268 aa20.46■□□□□ 0.87
IFFO1-208ENST00000472558 CLSPNQ9HAW4 1339 aa20.44■□□□□ 0.86
IFFO1-208ENST00000472558 CC2D2AQ9P2K1 1620 aa20.44■□□□□ 0.86
IFFO1-208ENST00000472558 DNAJC5BQ9UF47 199 aa20.41■□□□□ 0.86
IFFO1-208ENST00000472558 NCAPD3P42695 1498 aa20.36■□□□□ 0.85
IFFO1-208ENST00000472558 CLIP1P30622 1438 aa20.36■□□□□ 0.85
IFFO1-208ENST00000472558 BCL11AQ9H165 835 aa20.36■□□□□ 0.85
IFFO1-208ENST00000472558 DHX57Q6P158 1386 aaKnown RBP20.33■□□□□ 0.84
IFFO1-208ENST00000472558 VPS8Q8N3P4 1428 aa20.32■□□□□ 0.84
IFFO1-208ENST00000472558 KCNH8Q96L42 1107 aa20.28■□□□□ 0.84
IFFO1-208ENST00000472558 CEP164Q9UPV0 1460 aa20.28■□□□□ 0.84
IFFO1-208ENST00000472558 HMGXB3Q12766 1538 aa20.25■□□□□ 0.83
IFFO1-208ENST00000472558 KIF21BO75037 1637 aa20.25■□□□□ 0.83
IFFO1-208ENST00000472558 APLP2Q06481 763 aa20.22■□□□□ 0.83
IFFO1-208ENST00000472558 RANGAP1P46060 587 aaPredicted RBP20.22■□□□□ 0.83
IFFO1-208ENST00000472558 BCANQ96GW7 911 aa20.21■□□□□ 0.83
IFFO1-208ENST00000472558 RAPGEF2Q9Y4G8 1499 aa20.17■□□□□ 0.82
IFFO1-208ENST00000472558 SYNJ1O43426 1573 aa20.17■□□□□ 0.82
IFFO1-208ENST00000472558 FKBP8Q14318 412 aa20.09■□□□□ 0.81
IFFO1-208ENST00000472558 KANK4Q5T7N3 995 aaPredicted RBP20.08■□□□□ 0.8
IFFO1-208ENST00000472558 RBM19Q9Y4C8 960 aaKnown RBP20.04■□□□□ 0.8
IFFO1-208ENST00000472558 NESP48681 1621 aa20.03■□□□□ 0.8
IFFO1-208ENST00000472558 CFTRP13569 1480 aa19.97■□□□□ 0.79
IFFO1-208ENST00000472558 ARAP1Q96P48 1450 aa19.97■□□□□ 0.79
IFFO1-208ENST00000472558 RRBP1Q9P2E9 1410 aaKnown RBP19.96■□□□□ 0.79
IFFO1-208ENST00000472558 CADPSQ9ULU8 1353 aa19.95■□□□□ 0.78
IFFO1-208ENST00000472558 CUX2O14529 1486 aa19.95■□□□□ 0.78
IFFO1-208ENST00000472558 ITGAEP38570 1179 aa19.93■□□□□ 0.78
IFFO1-208ENST00000472558 DDX10Q13206 875 aaKnown RBP19.92■□□□□ 0.78
IFFO1-208ENST00000472558 MSH5O43196 834 aa19.92■□□□□ 0.78
IFFO1-208ENST00000472558 MAPKBP1O60336 1514 aa19.9■□□□□ 0.78
IFFO1-208ENST00000472558 CCNB3Q8WWL7 1395 aa19.85■□□□□ 0.77
IFFO1-208ENST00000472558 TRIM52Q96A61 297 aa19.85■□□□□ 0.77
IFFO1-208ENST00000472558 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.77
IFFO1-208ENST00000472558 WDR97A6NE52 1622 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms