RNA–Protein interactions for RNA: ENST00000619571.4

IFFO1-212, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2 BASIC

Gene IFFO1, Length 2,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-212ENST00000619571 NISCHQ9Y2I1 1504 aa37.57■■■■□ 3.61
IFFO1-212ENST00000619571 SHROOM4Q9ULL8 1493 aa32.59■■■□□ 2.81
IFFO1-212ENST00000619571 SUPT5HO00267 1087 aaKnown RBP32.16■■■□□ 2.74
IFFO1-212ENST00000619571 ZCCHC6Q5VYS8 1495 aaKnown RBP31.84■■■□□ 2.69
IFFO1-212ENST00000619571 CCDC180Q9P1Z9 1646 aa31.6■■■□□ 2.65
IFFO1-212ENST00000619571 CHIC1Q5VXU3 224 aa31.37■■■□□ 2.61
IFFO1-212ENST00000619571 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
IFFO1-212ENST00000619571 DCAF8L2P0C7V8 631 aa31.34■■■□□ 2.61
IFFO1-212ENST00000619571 HRCP23327 699 aa31.1■■■□□ 2.57
IFFO1-212ENST00000619571 PCGF6Q9BYE7 350 aa30.91■■■□□ 2.54
IFFO1-212ENST00000619571 DCAF1Q9Y4B6 1507 aa30.7■■■□□ 2.5
IFFO1-212ENST00000619571 LOC105371045A0A1W2PR82 267 aa30.57■■■□□ 2.48
IFFO1-212ENST00000619571 PPARGC1BQ86YN6 1023 aaKnown RBP30.53■■■□□ 2.48
IFFO1-212ENST00000619571 TRIM26Q12899 539 aaPredicted RBP30.11■■■□□ 2.41
IFFO1-212ENST00000619571 ABCC9O60706 1549 aa30.11■■■□□ 2.41
IFFO1-212ENST00000619571 RSF1Q96T23 1441 aaPredicted RBP29.96■■■□□ 2.39
IFFO1-212ENST00000619571 SCRIBQ14160 1630 aa29.91■■■□□ 2.38
IFFO1-212ENST00000619571 TRIM41Q8WV44 630 aa29.85■■■□□ 2.37
IFFO1-212ENST00000619571 FAM9AQ8IZU1 332 aaPredicted RBP29.74■■■□□ 2.35
IFFO1-212ENST00000619571 RB1CC1Q8TDY2 1594 aa29.71■■■□□ 2.35
IFFO1-212ENST00000619571 EHMT2Q96KQ7 1210 aa29.58■■■□□ 2.33
IFFO1-212ENST00000619571 ZEB1P37275 1124 aaPredicted RBP29.57■■■□□ 2.32
IFFO1-212ENST00000619571 CECR2Q9BXF3 1484 aa29.4■■■□□ 2.3
IFFO1-212ENST00000619571 MROH2BQ7Z745 1585 aa29.29■■■□□ 2.28
IFFO1-212ENST00000619571 NACADO15069 1562 aa29.19■■■□□ 2.26
IFFO1-212ENST00000619571 WIZO95785 1651 aa29.15■■■□□ 2.26
IFFO1-212ENST00000619571 SCAF1Q9H7N4 1312 aaKnown RBP28.97■■■□□ 2.23
IFFO1-212ENST00000619571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.94■■■□□ 2.22
IFFO1-212ENST00000619571 BAZ1AQ9NRL2 1556 aaPredicted RBP28.92■■■□□ 2.22
IFFO1-212ENST00000619571 CCER1Q8TC90 406 aaPredicted RBP28.85■■■□□ 2.21
IFFO1-212ENST00000619571 EIF4G1Q04637 1599 aaKnown RBP28.84■■■□□ 2.21
IFFO1-212ENST00000619571 TTBK1Q5TCY1 1321 aaPredicted RBP28.71■■■□□ 2.19
IFFO1-212ENST00000619571 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
IFFO1-212ENST00000619571 PELP1Q8IZL8 1130 aaKnown RBP28.69■■■□□ 2.18
IFFO1-212ENST00000619571 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
IFFO1-212ENST00000619571 TOP2AP11388 1531 aaKnown RBP28.62■■■□□ 2.17
IFFO1-212ENST00000619571 CEP162Q5TB80 1403 aa28.57■■■□□ 2.16
IFFO1-212ENST00000619571 WRNQ14191 1432 aaPredicted RBP eCLIP28.56■■■□□ 2.16
IFFO1-212ENST00000619571 SOGA1O94964 1423 aa28.54■■■□□ 2.16
IFFO1-212ENST00000619571 SMARCA4P51532 1647 aa28.52■■■□□ 2.16
IFFO1-212ENST00000619571 SMARCA2P51531 1590 aa28.51■■■□□ 2.15
IFFO1-212ENST00000619571 ACIN1Q9UKV3 1341 aaKnown RBP28.51■■■□□ 2.15
IFFO1-212ENST00000619571 DIEXFQ68CQ4 756 aaKnown RBP28.49■■■□□ 2.15
IFFO1-212ENST00000619571 NEUROD1Q13562 356 aa28.49■■■□□ 2.15
IFFO1-212ENST00000619571 TNIKQ9UKE5 1360 aa28.44■■■□□ 2.14
IFFO1-212ENST00000619571 UBTFP17480 764 aaKnown RBP28.41■■■□□ 2.14
IFFO1-212ENST00000619571 CSRNP3Q8WYN3 585 aa28.41■■■□□ 2.14
IFFO1-212ENST00000619571 RUSC2Q8N2Y8 1516 aa28.39■■■□□ 2.14
IFFO1-212ENST00000619571 EEA1Q15075 1411 aa28.3■■■□□ 2.12
IFFO1-212ENST00000619571 UNC13AQ9UPW8 1703 aa28.26■■■□□ 2.12
IFFO1-212ENST00000619571 CENPBP07199 599 aaPredicted RBP28.26■■■□□ 2.11
IFFO1-212ENST00000619571 GTF3C3Q9Y5Q9 886 aa28.25■■■□□ 2.11
IFFO1-212ENST00000619571 GOLGA3Q08378 1498 aa28.2■■■□□ 2.1
IFFO1-212ENST00000619571 ZNF316A6NFI3 1004 aaPredicted RBP28.14■■■□□ 2.1
IFFO1-212ENST00000619571 PABPN1Q86U42 306 aaKnown RBP eCLIP28.12■■■□□ 2.09
IFFO1-212ENST00000619571 HNRNPUL2Q1KMD3 747 aaKnown RBP28.06■■■□□ 2.08
IFFO1-212ENST00000619571 CEP164Q9UPV0 1460 aa27.98■■■□□ 2.07
IFFO1-212ENST00000619571 SYNJ1O43426 1573 aa27.96■■■□□ 2.07
IFFO1-212ENST00000619571 CLIP1P30622 1438 aa27.95■■■□□ 2.06
IFFO1-212ENST00000619571 YTHDC1Q96MU7 727 aaKnown RBP27.95■■■□□ 2.06
IFFO1-212ENST00000619571 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
IFFO1-212ENST00000619571 KIF21BO75037 1637 aa27.9■■■□□ 2.06
IFFO1-212ENST00000619571 PEG3Q9GZU2 1588 aa27.87■■■□□ 2.05
IFFO1-212ENST00000619571 RANGAP1P46060 587 aaPredicted RBP27.86■■■□□ 2.05
IFFO1-212ENST00000619571 MIER1Q8N108 512 aa27.86■■■□□ 2.05
IFFO1-212ENST00000619571 VPS8Q8N3P4 1428 aa27.84■■■□□ 2.05
IFFO1-212ENST00000619571 APLP2Q06481 763 aa27.82■■■□□ 2.04
IFFO1-212ENST00000619571 RAPGEF2Q9Y4G8 1499 aa27.8■■■□□ 2.04
IFFO1-212ENST00000619571 BAZ1BQ9UIG0 1483 aaKnown RBP27.73■■■□□ 2.03
IFFO1-212ENST00000619571 ATAD2BQ9ULI0 1458 aa27.73■■■□□ 2.03
IFFO1-212ENST00000619571 TOP2BQ02880 1626 aa27.52■■■□□ 2
IFFO1-212ENST00000619571 DHX57Q6P158 1386 aaKnown RBP27.45■■□□□ 1.99
IFFO1-212ENST00000619571 KANK4Q5T7N3 995 aaPredicted RBP27.45■■□□□ 1.99
IFFO1-212ENST00000619571 ARAP1Q96P48 1450 aa27.42■■□□□ 1.98
IFFO1-212ENST00000619571 PRXQ9BXM0 1461 aa27.41■■□□□ 1.98
IFFO1-212ENST00000619571 CLSPNQ9HAW4 1339 aa27.4■■□□□ 1.98
IFFO1-212ENST00000619571 ERICH3Q5RHP9 1530 aa27.37■■□□□ 1.97
IFFO1-212ENST00000619571 BIVM-ERCC5R4GMW8 1640 aa27.37■■□□□ 1.97
IFFO1-212ENST00000619571 MYT1Q01538 1121 aa27.28■■□□□ 1.96
IFFO1-212ENST00000619571 RRBP1Q9P2E9 1410 aaKnown RBP27.24■■□□□ 1.95
IFFO1-212ENST00000619571 CUX1P39880 1505 aa27.23■■□□□ 1.95
IFFO1-212ENST00000619571 KIF27Q86VH2 1401 aa27.2■■□□□ 1.95
IFFO1-212ENST00000619571 ITGAEP38570 1179 aa27.2■■□□□ 1.94
IFFO1-212ENST00000619571 CCNB3Q8WWL7 1395 aa27.16■■□□□ 1.94
IFFO1-212ENST00000619571 ARHGAP35Q9NRY4 1499 aa27.13■■□□□ 1.93
IFFO1-212ENST00000619571 CUX2O14529 1486 aa27.09■■□□□ 1.93
IFFO1-212ENST00000619571 SUPT16HQ9Y5B9 1047 aaKnown RBP27.09■■□□□ 1.93
IFFO1-212ENST00000619571 NCAPD3P42695 1498 aa27.07■■□□□ 1.92
IFFO1-212ENST00000619571 HMGXB3Q12766 1538 aa27.04■■□□□ 1.92
IFFO1-212ENST00000619571 RAB3GAP2Q9H2M9 1393 aa26.99■■□□□ 1.91
IFFO1-212ENST00000619571 CFTRP13569 1480 aa26.99■■□□□ 1.91
IFFO1-212ENST00000619571 KCNH8Q96L42 1107 aa26.94■■□□□ 1.9
IFFO1-212ENST00000619571 IGF1RP08069 1367 aa26.91■■□□□ 1.9
IFFO1-212ENST00000619571 MAPKBP1O60336 1514 aa26.91■■□□□ 1.9
IFFO1-212ENST00000619571 TIAM1Q13009 1591 aa26.86■■□□□ 1.89
IFFO1-212ENST00000619571 SETD5Q9C0A6 1442 aa26.83■■□□□ 1.89
IFFO1-212ENST00000619571 FAM50AQ14320 339 aaKnown RBP26.81■■□□□ 1.88
IFFO1-212ENST00000619571 SIN3AQ96ST3 1273 aa26.81■■□□□ 1.88
IFFO1-212ENST00000619571 PHLDB1Q86UU1 1377 aa26.81■■□□□ 1.88
IFFO1-212ENST00000619571 CARMIL1Q5VZK9 1371 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms