Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC15.92■□□□□ 0.146e-7■□□□□ 9.7
NKRFO15226 PUF60-211ENST00000527744 1007 ntTSL 215.28■□□□□ 0.046e-7■□□□□ 9.7
NKRFO15226 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC14.8□□□□□ -0.046e-7■□□□□ 9.7
NKRFO15226 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.064e-10■□□□□ 9.7
NKRFO15226 DGCR8-202ENST00000383024 4419 ntTSL 5 BASIC13.08□□□□□ -0.324e-10■□□□□ 9.7
NKRFO15226 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.552e-6■□□□□ 9.7
NKRFO15226 EEF1D-237ENST00000531281 813 ntTSL 219.97■□□□□ 0.791e-8■□□□□ 9.7
NKRFO15226 EEF1D-239ENST00000531670 926 ntTSL 318.16■□□□□ 0.51e-8■□□□□ 9.7
NKRFO15226 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.254e-11■□□□□ 9.7
NKRFO15226 SPATS2L-225ENST00000471533 329 ntTSL 322.74■■□□□ 1.234e-11■□□□□ 9.7
NKRFO15226 SPATS2L-221ENST00000459656 1901 ntTSL 1 (best)22.69■■□□□ 1.224e-11■□□□□ 9.7
NKRFO15226 SPATS2L-216ENST00000444012 605 ntTSL 421.52■■□□□ 1.044e-11■□□□□ 9.7
NKRFO15226 SPATS2L-212ENST00000428692 541 ntTSL 421■□□□□ 0.954e-11■□□□□ 9.7
NKRFO15226 SPATS2L-220ENST00000457757 835 ntTSL 521■□□□□ 0.954e-11■□□□□ 9.7
NKRFO15226 SPATS2L-211ENST00000423749 771 ntTSL 520.81■□□□□ 0.924e-11■□□□□ 9.7
NKRFO15226 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.64e-11■□□□□ 9.7
NKRFO15226 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.07■□□□□ 0.484e-11■□□□□ 9.7
NKRFO15226 SPATS2L-226ENST00000471601 1730 ntTSL 216.37■□□□□ 0.214e-11■□□□□ 9.7
NKRFO15226 SPATS2L-214ENST00000439084 584 ntTSL 316.22■□□□□ 0.194e-11■□□□□ 9.7
NKRFO15226 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.164e-11■□□□□ 9.7
NKRFO15226 SPATS2L-208ENST00000409718 2648 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.194e-11■□□□□ 9.7
NKRFO15226 SPATS2L-219ENST00000453663 637 ntTSL 411.82□□□□□ -0.524e-11■□□□□ 9.7
NKRFO15226 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC11.57□□□□□ -0.564e-11■□□□□ 9.7
NKRFO15226 SPATS2L-207ENST00000409397 920 ntTSL 39.3□□□□□ -0.924e-11■□□□□ 9.7
NKRFO15226 SPATS2L-201ENST00000358677 6156 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.994e-11■□□□□ 9.7
NKRFO15226 SPATS2L-215ENST00000439395 561 ntTSL 46.58□□□□□ -1.364e-11■□□□□ 9.7
NKRFO15226 SIN3A-204ENST00000562776 590 ntTSL 412.63□□□□□ -0.391e-6■□□□□ 9.7
NKRFO15226 SH3PXD2A-201ENST00000315994 5504 ntTSL 1 (best)13.56□□□□□ -0.241e-6■□□□□ 9.7
NKRFO15226 ZNF629-201ENST00000262525 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.441e-11■□□□□ 9.7
NKRFO15226 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.592e-6■□□□□ 9.6
NKRFO15226 SLC12A7-204ENST00000513223 1066 ntTSL 517.71■□□□□ 0.433e-6■□□□□ 9.6
NKRFO15226 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.292e-6■□□□□ 9.6
NKRFO15226 DNAJA1-203ENST00000495015 604 ntTSL 39.05□□□□□ -0.962e-6■□□□□ 9.6
NKRFO15226 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.281e-6■□□□□ 9.6
NKRFO15226 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC8.67□□□□□ -1.021e-6■□□□□ 9.6
NKRFO15226 SON-203ENST00000381679 7860 ntTSL 5 BASIC13.24□□□□□ -0.295e-7■□□□□ 9.6
NKRFO15226 SON-208ENST00000455528 8394 ntTSL 1 (best)12.16□□□□□ -0.465e-7■□□□□ 9.6
NKRFO15226 SON-201ENST00000300278 7477 ntTSL 1 (best) BASIC11.57□□□□□ -0.565e-7■□□□□ 9.6
NKRFO15226 SON-202ENST00000356577 8813 ntTSL 1 (best) BASIC11.06□□□□□ -0.645e-7■□□□□ 9.6
NKRFO15226 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC6.21□□□□□ -1.425e-7■□□□□ 9.6
NKRFO15226 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.271e-11■□□□□ 9.6
NKRFO15226 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.071e-11■□□□□ 9.6
NKRFO15226 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.399e-7■□□□□ 9.6
NKRFO15226 HNRNPF-202ENST00000356053 2670 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.169e-7■□□□□ 9.6
NKRFO15226 PLEC-202ENST00000345136 14803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.493e-6■□□□□ 9.6
NKRFO15226 GALE-212ENST00000470383 2073 ntTSL 228.83■■■□□ 2.211e-6■□□□□ 9.6
NKRFO15226 GALE-209ENST00000467070 556 ntTSL 323.87■■□□□ 1.411e-6■□□□□ 9.6
NKRFO15226 GALE-208ENST00000466250 598 ntTSL 223.44■■□□□ 1.341e-6■□□□□ 9.6
NKRFO15226 GALE-202ENST00000418277 882 ntTSL 520.07■□□□□ 0.81e-6■□□□□ 9.6
NKRFO15226 GALE-207ENST00000459934 1563 ntTSL 518.93■□□□□ 0.621e-6■□□□□ 9.6
NKRFO15226 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.51e-6■□□□□ 9.6
NKRFO15226 GALE-214ENST00000481736 1801 ntTSL 211.53□□□□□ -0.561e-6■□□□□ 9.6
NKRFO15226 ERBB2-209ENST00000578709 559 ntTSL 427.15■■□□□ 1.941e-6■□□□□ 9.6
NKRFO15226 AL390719.1-204ENST00000412397 1219 ntBASIC22.92■■□□□ 1.261e-6■□□□□ 9.6
NKRFO15226 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.77■■□□□ 1.241e-6■□□□□ 9.6
NKRFO15226 AC104809.2-203ENST00000438506 588 ntTSL 317.98■□□□□ 0.471e-6■□□□□ 9.6
NKRFO15226 MYO18A-220ENST00000588791 650 ntTSL 517.97■□□□□ 0.471e-6■□□□□ 9.6
NKRFO15226 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.371e-6■□□□□ 9.6
NKRFO15226 TSNARE1-203ENST00000518928 940 ntTSL 316.37■□□□□ 0.211e-6■□□□□ 9.6
NKRFO15226 AC111170.3-201ENST00000624282 2464 ntBASIC16.08■□□□□ 0.161e-6■□□□□ 9.6
NKRFO15226 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.121e-6■□□□□ 9.6
NKRFO15226 C1QTNF6-207ENST00000497071 688 ntTSL 314.11□□□□□ -0.151e-6■□□□□ 9.6
NKRFO15226 MYO18A-207ENST00000530254 6479 ntTSL 1 (best)13.55□□□□□ -0.241e-6■□□□□ 9.6
NKRFO15226 AL390719.1-203ENST00000456409 750 ntTSL 213.38□□□□□ -0.271e-6■□□□□ 9.6
NKRFO15226 MYO18A-223ENST00000628822 7501 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.591e-6■□□□□ 9.6
NKRFO15226 MYO18A-209ENST00000531253 7504 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.591e-6■□□□□ 9.6
NKRFO15226 AL390719.1-202ENST00000394517 397 ntTSL 511.33□□□□□ -0.61e-6■□□□□ 9.6
NKRFO15226 MYO18A-202ENST00000527372 9992 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.611e-6■□□□□ 9.6
NKRFO15226 MYO18A-214ENST00000533112 7522 ntTSL 1 (best) BASIC10.79□□□□□ -0.681e-6■□□□□ 9.6
NKRFO15226 IARS-208ENST00000472894 651 ntTSL 38.08□□□□□ -1.121e-6■□□□□ 9.6
NKRFO15226 HIVEP2-201ENST00000012134 9755 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.785e-10■□□□□ 9.6
NKRFO15226 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.815e-10■□□□□ 9.6
NKRFO15226 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.095e-10■□□□□ 9.6
NKRFO15226 ACTB-208ENST00000464611 715 ntTSL 59.23□□□□□ -0.931e-14■□□□□ 9.6
NKRFO15226 SCAF8-204ENST00000461219 677 ntTSL 523.63■■□□□ 1.371e-8■□□□□ 9.5
NKRFO15226 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.351e-8■□□□□ 9.5
NKRFO15226 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC13.62□□□□□ -0.231e-8■□□□□ 9.5
NKRFO15226 SCAF8-205ENST00000464628 468 ntTSL 513.62□□□□□ -0.231e-8■□□□□ 9.5
NKRFO15226 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC10.42□□□□□ -0.741e-8■□□□□ 9.5
NKRFO15226 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.891e-8■□□□□ 9.5
NKRFO15226 CHKA-206ENST00000531341 524 ntTSL 324.79■■□□□ 1.561e-8■□□□□ 9.5
NKRFO15226 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.61e-8■□□□□ 9.5
NKRFO15226 EEF1D-244ENST00000532543 791 ntTSL 319.12■□□□□ 0.652e-7■□□□□ 9.5
NKRFO15226 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.65e-7■□□□□ 9.5
NKRFO15226 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.265e-7■□□□□ 9.5
NKRFO15226 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)15.82■□□□□ 0.125e-7■□□□□ 9.5
NKRFO15226 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.776e-13■□□□□ 9.5
NKRFO15226 ACTB-207ENST00000462494 2245 ntTSL 518.91■□□□□ 0.626e-13■□□□□ 9.5
NKRFO15226 ACTB-204ENST00000425660 1845 ntTSL 1 (best)16.77■□□□□ 0.286e-13■□□□□ 9.5
NKRFO15226 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.682e-7■□□□□ 9.5
NKRFO15226 STK25-215ENST00000439101 779 ntTSL 530.23■■■□□ 2.432e-7■□□□□ 9.5
NKRFO15226 RNF166-209ENST00000567844 633 ntTSL 5 BASIC29.94■■■□□ 2.382e-7■□□□□ 9.5
NKRFO15226 STK25-209ENST00000424537 781 ntTSL 229.86■■■□□ 2.372e-7■□□□□ 9.5
NKRFO15226 PTPN18-213ENST00000489215 460 ntTSL 427.8■■■□□ 2.042e-7■□□□□ 9.5
NKRFO15226 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.842e-7■□□□□ 9.5
NKRFO15226 STK25-210ENST00000426941 575 ntTSL 226.4■■□□□ 1.822e-7■□□□□ 9.5
NKRFO15226 STK25-219ENST00000452891 575 ntTSL 426.4■■□□□ 1.822e-7■□□□□ 9.5
NKRFO15226 SREBF1-214ENST00000486311 473 ntTSL 326.2■■□□□ 1.782e-7■□□□□ 9.5
NKRFO15226 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.768e-6■□□□□ 9.5
NKRFO15226 PTPN18-205ENST00000428843 785 ntTSL 325.44■■□□□ 1.662e-7■□□□□ 9.5
Retrieved 100 of 9,198 protein–RNA pairs in 40.3 ms