RNA–Protein interactions for RNA: ENST00000427998.5

AL390719.1-201, humanhuman

TSL 1 (best) BASIC

Gene AL390719.1, Length 977 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390719.1-201ENST00000427998 NISCHQ9Y2I1 1504 aa48.73■■■■■ 5.39
AL390719.1-201ENST00000427998 ABCC9O60706 1549 aa44.01■■■■■ 4.64
AL390719.1-201ENST00000427998 CCDC180Q9P1Z9 1646 aa43.73■■■■■ 4.59
AL390719.1-201ENST00000427998 RB1CC1Q8TDY2 1594 aa41.77■■■■■ 4.28
AL390719.1-201ENST00000427998 NACADO15069 1562 aa41.44■■■■■ 4.22
AL390719.1-201ENST00000427998 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
AL390719.1-201ENST00000427998 DCAF8L2P0C7V8 631 aa41.29■■■■■ 4.2
AL390719.1-201ENST00000427998 PABPN1Q86U42 306 aaKnown RBP eCLIP40.97■■■■■ 4.15
AL390719.1-201ENST00000427998 MYO15BQ96JP2 1530 aa40.81■■■■■ 4.12
AL390719.1-201ENST00000427998 UNC13AQ9UPW8 1703 aa40.67■■■■■ 4.1
AL390719.1-201ENST00000427998 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
AL390719.1-201ENST00000427998 ZCCHC6Q5VYS8 1495 aaKnown RBP40.35■■■■■ 4.05
AL390719.1-201ENST00000427998 DCAF1Q9Y4B6 1507 aa40.22■■■■■ 4.03
AL390719.1-201ENST00000427998 SHROOM4Q9ULL8 1493 aa40.02■■■■■ 4
AL390719.1-201ENST00000427998 SCRIBQ14160 1630 aa39.91■■■■□ 3.98
AL390719.1-201ENST00000427998 CC2D2AQ9P2K1 1620 aa39.69■■■■□ 3.94
AL390719.1-201ENST00000427998 CECR2Q9BXF3 1484 aa39.66■■■■□ 3.94
AL390719.1-201ENST00000427998 EIF4G1Q04637 1599 aaKnown RBP39.58■■■■□ 3.93
AL390719.1-201ENST00000427998 NCAPD3P42695 1498 aa38.28■■■■□ 3.72
AL390719.1-201ENST00000427998 DNAJC5Q9H3Z4 198 aa38.17■■■■□ 3.7
AL390719.1-201ENST00000427998 ATAD2BQ9ULI0 1458 aa38.15■■■■□ 3.7
AL390719.1-201ENST00000427998 ERCC6Q03468 1493 aa38.04■■■■□ 3.68
AL390719.1-201ENST00000427998 SMARCA2P51531 1590 aa38.02■■■■□ 3.68
AL390719.1-201ENST00000427998 SMARCA4P51532 1647 aa38.02■■■■□ 3.68
AL390719.1-201ENST00000427998 CUX2O14529 1486 aa37.99■■■■□ 3.67
AL390719.1-201ENST00000427998 HMGXB3Q12766 1538 aa37.97■■■■□ 3.67
AL390719.1-201ENST00000427998 BAZ1AQ9NRL2 1556 aaPredicted RBP37.85■■■■□ 3.65
AL390719.1-201ENST00000427998 BAZ1BQ9UIG0 1483 aaKnown RBP37.78■■■■□ 3.64
AL390719.1-201ENST00000427998 NESP48681 1621 aa37.72■■■■□ 3.63
AL390719.1-201ENST00000427998 PEG3Q9GZU2 1588 aa37.64■■■■□ 3.62
AL390719.1-201ENST00000427998 MROH2BQ7Z745 1585 aa37.54■■■■□ 3.6
AL390719.1-201ENST00000427998 LAMC3Q9Y6N6 1575 aa37.42■■■■□ 3.58
AL390719.1-201ENST00000427998 THOC2Q8NI27 1593 aaKnown RBP37.34■■■■□ 3.57
AL390719.1-201ENST00000427998 PDS5BQ9NTI5 1447 aa37.27■■■■□ 3.56
AL390719.1-201ENST00000427998 KIF21AQ7Z4S6 1674 aa37.15■■■■□ 3.54
AL390719.1-201ENST00000427998 CADPSQ9ULU8 1353 aa37.14■■■■□ 3.54
AL390719.1-201ENST00000427998 WIZO95785 1651 aa37.04■■■■□ 3.52
AL390719.1-201ENST00000427998 MRC2Q9UBG0 1479 aa36.94■■■■□ 3.5
AL390719.1-201ENST00000427998 WDR62O43379 1518 aa36.83■■■■□ 3.49
AL390719.1-201ENST00000427998 CEP164Q9UPV0 1460 aa36.77■■■■□ 3.48
AL390719.1-201ENST00000427998 RSF1Q96T23 1441 aaPredicted RBP36.72■■■■□ 3.47
AL390719.1-201ENST00000427998 FANCD2Q9BXW9 1451 aa36.71■■■■□ 3.47
AL390719.1-201ENST00000427998 CFTRP13569 1480 aa36.65■■■■□ 3.46
AL390719.1-201ENST00000427998 TOP2AP11388 1531 aaKnown RBP36.61■■■■□ 3.45
AL390719.1-201ENST00000427998 TRIM41Q8WV44 630 aa36.48■■■■□ 3.43
AL390719.1-201ENST00000427998 URB2Q14146 1524 aaKnown RBP36.39■■■■□ 3.42
AL390719.1-201ENST00000427998 OSCARQ8IYS5 282 aa36.25■■■■□ 3.39
AL390719.1-201ENST00000427998 CCDC88BA6NC98 1476 aa36.2■■■■□ 3.39
AL390719.1-201ENST00000427998 PRDM2Q13029 1718 aa36.13■■■■□ 3.37
AL390719.1-201ENST00000427998 IFT140Q96RY7 1462 aa36.05■■■■□ 3.36
AL390719.1-201ENST00000427998 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
AL390719.1-201ENST00000427998 TOPBP1Q92547 1522 aa35.98■■■■□ 3.35
AL390719.1-201ENST00000427998 ABCC8Q09428 1581 aa35.89■■■■□ 3.34
AL390719.1-201ENST00000427998 DNMBPQ6XZF7 1577 aa35.82■■■■□ 3.32
AL390719.1-201ENST00000427998 EIF4G3O43432 1585 aaKnown RBP35.75■■■■□ 3.31
AL390719.1-201ENST00000427998 RIMBP3CA6NJZ7 1639 aa35.73■■■■□ 3.31
AL390719.1-201ENST00000427998 RIMBP3BA6NNM3 1639 aa35.73■■■■□ 3.31
AL390719.1-201ENST00000427998 RIMBP3Q9UFD9 1639 aa35.73■■■■□ 3.31
AL390719.1-201ENST00000427998 AQRO60306 1485 aaKnown RBP eCLIP35.65■■■■□ 3.3
AL390719.1-201ENST00000427998 ARHGEF11O15085 1522 aa35.64■■■■□ 3.3
AL390719.1-201ENST00000427998 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
AL390719.1-201ENST00000427998 POLA1P09884 1462 aaPredicted RBP35.6■■■■□ 3.29
AL390719.1-201ENST00000427998 FBLN2P98095 1184 aa35.5■■■■□ 3.27
AL390719.1-201ENST00000427998 RAD54L2Q9Y4B4 1467 aa35.48■■■■□ 3.27
AL390719.1-201ENST00000427998 SOGA1O94964 1423 aa35.46■■■■□ 3.27
AL390719.1-201ENST00000427998 CHD1O14646 1710 aa35.46■■■■□ 3.27
AL390719.1-201ENST00000427998 CYB5RLQ6IPT4 315 aa35.43■■■■□ 3.26
AL390719.1-201ENST00000427998 TDRD9Q8NDG6 1382 aaKnown RBP35.42■■■■□ 3.26
AL390719.1-201ENST00000427998 FGD5Q6ZNL6 1462 aa35.36■■■■□ 3.25
AL390719.1-201ENST00000427998 SNAPC4Q5SXM2 1469 aa35.29■■■■□ 3.24
AL390719.1-201ENST00000427998 ARAP1Q96P48 1450 aa35.29■■■■□ 3.24
AL390719.1-201ENST00000427998 CUX1P39880 1505 aa35.28■■■■□ 3.24
AL390719.1-201ENST00000427998 WDR97A6NE52 1622 aa35.27■■■■□ 3.24
AL390719.1-201ENST00000427998 CHMP7Q8WUX9 453 aaPredicted RBP35.2■■■■□ 3.23
AL390719.1-201ENST00000427998 MAGI1Q96QZ7 1491 aaPredicted RBP35.18■■■■□ 3.22
AL390719.1-201ENST00000427998 GRIN2BQ13224 1484 aa35.17■■■■□ 3.22
AL390719.1-201ENST00000427998 TRHP20396 242 aaPredicted RBP35.12■■■■□ 3.21
AL390719.1-201ENST00000427998 CLASP1Q7Z460 1538 aa35.11■■■■□ 3.21
AL390719.1-201ENST00000427998 SYNJ1O43426 1573 aa35.09■■■■□ 3.21
AL390719.1-201ENST00000427998 SYNJ2O15056 1496 aa35.07■■■■□ 3.2
AL390719.1-201ENST00000427998 SUPT5HO00267 1087 aaKnown RBP35.03■■■■□ 3.2
AL390719.1-201ENST00000427998 GAPVD1Q14C86 1478 aa35.02■■■■□ 3.2
AL390719.1-201ENST00000427998 ABCA10Q8WWZ4 1543 aa34.95■■■■□ 3.19
AL390719.1-201ENST00000427998 PBRM1Q86U86 1689 aa34.92■■■■□ 3.18
AL390719.1-201ENST00000427998 ABCA5Q8WWZ7 1642 aa34.87■■■■□ 3.17
AL390719.1-201ENST00000427998 WRNQ14191 1432 aaPredicted RBP eCLIP34.81■■■■□ 3.16
AL390719.1-201ENST00000427998 GRIN2AQ12879 1464 aa34.71■■■■□ 3.15
AL390719.1-201ENST00000427998 TOP2BQ02880 1626 aa34.65■■■■□ 3.14
AL390719.1-201ENST00000427998 ADAMTS12P58397 1594 aa34.65■■■■□ 3.14
AL390719.1-201ENST00000427998 BIVM-ERCC5R4GMW8 1640 aa34.63■■■■□ 3.13
AL390719.1-201ENST00000427998 NUP160Q12769 1436 aa34.6■■■■□ 3.13
AL390719.1-201ENST00000427998 FHAD1B1AJZ9 1412 aa34.58■■■■□ 3.13
AL390719.1-201ENST00000427998 CEP170Q5SW79 1584 aa34.56■■■■□ 3.12
AL390719.1-201ENST00000427998 ERCC6L2Q5T890 1561 aa34.55■■■■□ 3.12
AL390719.1-201ENST00000427998 ERICH3Q5RHP9 1530 aa34.5■■■■□ 3.11
AL390719.1-201ENST00000427998 SHROOM2Q13796 1616 aa34.4■■■■□ 3.1
AL390719.1-201ENST00000427998 PRG4Q92954 1404 aaPredicted RBP34.3■■■■□ 3.08
AL390719.1-201ENST00000427998 JPH4Q96JJ6 628 aa34.26■■■■□ 3.08
AL390719.1-201ENST00000427998 AEBP2Q6ZN18 517 aaPredicted RBP34.23■■■■□ 3.07
AL390719.1-201ENST00000427998 RUSC2Q8N2Y8 1516 aa34.15■■■■□ 3.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms