RNA–Protein interactions for RNA: ENST00000464628.1

SCAF8-205, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-205ENST00000464628 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
SCAF8-205ENST00000464628 ABCC9O60706 1549 aa28.41■■■□□ 2.14
SCAF8-205ENST00000464628 CCDC180Q9P1Z9 1646 aa27.66■■■□□ 2.02
SCAF8-205ENST00000464628 DNAJC5BQ9UF47 199 aa27.46■■□□□ 1.99
SCAF8-205ENST00000464628 RB1CC1Q8TDY2 1594 aa26.67■■□□□ 1.86
SCAF8-205ENST00000464628 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
SCAF8-205ENST00000464628 NACADO15069 1562 aa26.25■■□□□ 1.79
SCAF8-205ENST00000464628 PABPN1Q86U42 306 aaKnown RBP eCLIP26.18■■□□□ 1.78
SCAF8-205ENST00000464628 BICRAQ9NZM4 1560 aa26.03■■□□□ 1.76
SCAF8-205ENST00000464628 DNAJC5Q9H3Z4 198 aa25.86■■□□□ 1.73
SCAF8-205ENST00000464628 CC2D2AQ9P2K1 1620 aa25.7■■□□□ 1.71
SCAF8-205ENST00000464628 CECR2Q9BXF3 1484 aa25.68■■□□□ 1.7
SCAF8-205ENST00000464628 MYO15BQ96JP2 1530 aa25.61■■□□□ 1.69
SCAF8-205ENST00000464628 DCAF8L2P0C7V8 631 aa25.6■■□□□ 1.69
SCAF8-205ENST00000464628 SHROOM4Q9ULL8 1493 aa25.52■■□□□ 1.68
SCAF8-205ENST00000464628 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
SCAF8-205ENST00000464628 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
SCAF8-205ENST00000464628 DCAF1Q9Y4B6 1507 aa24.94■■□□□ 1.58
SCAF8-205ENST00000464628 CUX2O14529 1486 aa24.9■■□□□ 1.58
SCAF8-205ENST00000464628 ZCCHC6Q5VYS8 1495 aaKnown RBP24.89■■□□□ 1.57
SCAF8-205ENST00000464628 ERCC6Q03468 1493 aa24.53■■□□□ 1.52
SCAF8-205ENST00000464628 TRIM41Q8WV44 630 aa24.26■■□□□ 1.47
SCAF8-205ENST00000464628 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
SCAF8-205ENST00000464628 NCAPD3P42695 1498 aa24.21■■□□□ 1.47
SCAF8-205ENST00000464628 NESP48681 1621 aa24.17■■□□□ 1.46
SCAF8-205ENST00000464628 HMGXB3Q12766 1538 aa24.03■■□□□ 1.44
SCAF8-205ENST00000464628 ATAD2BQ9ULI0 1458 aa24.02■■□□□ 1.44
SCAF8-205ENST00000464628 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
SCAF8-205ENST00000464628 SMARCA2P51531 1590 aa23.93■■□□□ 1.42
SCAF8-205ENST00000464628 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
SCAF8-205ENST00000464628 SMARCA4P51532 1647 aa23.84■■□□□ 1.41
SCAF8-205ENST00000464628 BAZ1AQ9NRL2 1556 aaPredicted RBP23.75■■□□□ 1.39
SCAF8-205ENST00000464628 BAZ1BQ9UIG0 1483 aaKnown RBP23.71■■□□□ 1.39
SCAF8-205ENST00000464628 PDS5BQ9NTI5 1447 aa23.64■■□□□ 1.37
SCAF8-205ENST00000464628 PEG3Q9GZU2 1588 aa23.64■■□□□ 1.37
SCAF8-205ENST00000464628 WDR62O43379 1518 aa23.64■■□□□ 1.37
SCAF8-205ENST00000464628 MRC2Q9UBG0 1479 aa23.58■■□□□ 1.37
SCAF8-205ENST00000464628 RIMBP3CA6NJZ7 1639 aa23.48■■□□□ 1.35
SCAF8-205ENST00000464628 RIMBP3BA6NNM3 1639 aa23.48■■□□□ 1.35
SCAF8-205ENST00000464628 RIMBP3Q9UFD9 1639 aa23.48■■□□□ 1.35
SCAF8-205ENST00000464628 OSCARQ8IYS5 282 aa23.42■■□□□ 1.34
SCAF8-205ENST00000464628 CADPSQ9ULU8 1353 aa23.38■■□□□ 1.33
SCAF8-205ENST00000464628 MROH2BQ7Z745 1585 aa23.28■■□□□ 1.32
SCAF8-205ENST00000464628 CEP164Q9UPV0 1460 aa23.28■■□□□ 1.32
SCAF8-205ENST00000464628 ARHGEF11O15085 1522 aa23.26■■□□□ 1.31
SCAF8-205ENST00000464628 AEBP2Q6ZN18 517 aaPredicted RBP23.23■■□□□ 1.31
SCAF8-205ENST00000464628 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
SCAF8-205ENST00000464628 URB2Q14146 1524 aaKnown RBP23.09■■□□□ 1.29
SCAF8-205ENST00000464628 WIZO95785 1651 aa23■■□□□ 1.27
SCAF8-205ENST00000464628 CFTRP13569 1480 aa22.98■■□□□ 1.27
SCAF8-205ENST00000464628 ARAP1Q96P48 1450 aa22.98■■□□□ 1.27
SCAF8-205ENST00000464628 TRHP20396 242 aaPredicted RBP22.95■■□□□ 1.26
SCAF8-205ENST00000464628 ZNF608Q9ULD9 1512 aaPredicted RBP22.94■■□□□ 1.26
SCAF8-205ENST00000464628 CYB5RLQ6IPT4 315 aa22.94■■□□□ 1.26
SCAF8-205ENST00000464628 CHD1O14646 1710 aa22.89■■□□□ 1.26
SCAF8-205ENST00000464628 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
SCAF8-205ENST00000464628 EIF4G3O43432 1585 aaKnown RBP22.85■■□□□ 1.25
SCAF8-205ENST00000464628 IFT140Q96RY7 1462 aa22.84■■□□□ 1.25
SCAF8-205ENST00000464628 RSF1Q96T23 1441 aaPredicted RBP22.76■■□□□ 1.23
SCAF8-205ENST00000464628 TOPBP1Q92547 1522 aa22.65■■□□□ 1.22
SCAF8-205ENST00000464628 TOP2AP11388 1531 aaKnown RBP22.62■■□□□ 1.21
SCAF8-205ENST00000464628 TARBP1Q13395 1621 aaKnown RBP22.61■■□□□ 1.21
SCAF8-205ENST00000464628 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
SCAF8-205ENST00000464628 AQRO60306 1485 aaKnown RBP eCLIP22.54■■□□□ 1.24e-15■■■■■ 47.2
SCAF8-205ENST00000464628 DNMBPQ6XZF7 1577 aa22.51■■□□□ 1.19
SCAF8-205ENST00000464628 ABCC8Q09428 1581 aa22.46■■□□□ 1.19
SCAF8-205ENST00000464628 FBLN2P98095 1184 aa22.42■■□□□ 1.18
SCAF8-205ENST00000464628 SYNJ1O43426 1573 aa22.39■■□□□ 1.18
SCAF8-205ENST00000464628 POLA1P09884 1462 aaPredicted RBP22.36■■□□□ 1.17
SCAF8-205ENST00000464628 SNAPC4Q5SXM2 1469 aa22.34■■□□□ 1.17
SCAF8-205ENST00000464628 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
SCAF8-205ENST00000464628 WDR97A6NE52 1622 aa22.29■■□□□ 1.16
SCAF8-205ENST00000464628 GAPVD1Q14C86 1478 aa22.28■■□□□ 1.16
SCAF8-205ENST00000464628 RAD54L2Q9Y4B4 1467 aa22.26■■□□□ 1.15
SCAF8-205ENST00000464628 KIF13AQ9H1H9 1805 aa22.24■■□□□ 1.15
SCAF8-205ENST00000464628 MAGI1Q96QZ7 1491 aaPredicted RBP22.23■■□□□ 1.15
SCAF8-205ENST00000464628 ILDR1Q86SU0 546 aaPredicted RBP22.23■■□□□ 1.15
SCAF8-205ENST00000464628 CHIC1Q5VXU3 224 aa22.22■■□□□ 1.15
SCAF8-205ENST00000464628 TDRD9Q8NDG6 1382 aaKnown RBP22.21■■□□□ 1.15
SCAF8-205ENST00000464628 SYNJ2O15056 1496 aa22.16■■□□□ 1.14
SCAF8-205ENST00000464628 ERCC6L2Q5T890 1561 aa22.14■■□□□ 1.13
SCAF8-205ENST00000464628 CHMP7Q8WUX9 453 aaPredicted RBP22.13■■□□□ 1.13
SCAF8-205ENST00000464628 PBRM1Q86U86 1689 aa22.13■■□□□ 1.13
SCAF8-205ENST00000464628 SOGA1O94964 1423 aa22.13■■□□□ 1.13
SCAF8-205ENST00000464628 GRIN2BQ13224 1484 aa22.1■■□□□ 1.13
SCAF8-205ENST00000464628 FGD5Q6ZNL6 1462 aa22.07■■□□□ 1.12
SCAF8-205ENST00000464628 CEP170Q5SW79 1584 aa21.98■■□□□ 1.11
SCAF8-205ENST00000464628 SHROOM2Q13796 1616 aa21.95■■□□□ 1.1
SCAF8-205ENST00000464628 KDM4FA0A1W2PPD8 638 aa21.95■■□□□ 1.1
SCAF8-205ENST00000464628 CUX1P39880 1505 aa21.94■■□□□ 1.1
SCAF8-205ENST00000464628 ABCA5Q8WWZ7 1642 aa21.93■■□□□ 1.1
SCAF8-205ENST00000464628 GRIN2AQ12879 1464 aa21.86■■□□□ 1.09
SCAF8-205ENST00000464628 KDM6BO15054 1643 aa21.85■■□□□ 1.09
SCAF8-205ENST00000464628 DIP2BQ9P265 1576 aa21.85■■□□□ 1.09
SCAF8-205ENST00000464628 NUP160Q12769 1436 aa21.84■■□□□ 1.09
SCAF8-205ENST00000464628 ABCC10Q5T3U5 1492 aa21.83■■□□□ 1.08
SCAF8-205ENST00000464628 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
SCAF8-205ENST00000464628 MAPKBP1O60336 1514 aa21.77■■□□□ 1.08
SCAF8-205ENST00000464628 ABCA10Q8WWZ4 1543 aa21.77■■□□□ 1.08
SCAF8-205ENST00000464628 TSPOAP1O95153 1857 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms