RNA–Protein interactions for RNA: ENST00000562776.5

SIN3A-204, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 4

Gene SIN3A, Length 590 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-204ENST00000562776 NISCHQ9Y2I1 1504 aa26.88■■□□□ 1.89
SIN3A-204ENST00000562776 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
SIN3A-204ENST00000562776 ABCC9O60706 1549 aa24.03■■□□□ 1.44
SIN3A-204ENST00000562776 RB1CC1Q8TDY2 1594 aa22.93■■□□□ 1.26
SIN3A-204ENST00000562776 NACADO15069 1562 aa22.81■■□□□ 1.24
SIN3A-204ENST00000562776 DNAJC5BQ9UF47 199 aa22.61■■□□□ 1.21
SIN3A-204ENST00000562776 DCAF8L2P0C7V8 631 aa22.6■■□□□ 1.21
SIN3A-204ENST00000562776 MYO15BQ96JP2 1530 aa22.57■■□□□ 1.2
SIN3A-204ENST00000562776 PABPN1Q86U42 306 aaKnown RBP eCLIP22.39■■□□□ 1.17
SIN3A-204ENST00000562776 ZCCHC6Q5VYS8 1495 aaKnown RBP22.34■■□□□ 1.17
SIN3A-204ENST00000562776 UNC13AQ9UPW8 1703 aa22.34■■□□□ 1.17
SIN3A-204ENST00000562776 DCAF1Q9Y4B6 1507 aa22.26■■□□□ 1.15
SIN3A-204ENST00000562776 BICRAQ9NZM4 1560 aa22.26■■□□□ 1.15
SIN3A-204ENST00000562776 SHROOM4Q9ULL8 1493 aa22.03■■□□□ 1.12
SIN3A-204ENST00000562776 SCRIBQ14160 1630 aa21.86■■□□□ 1.09
SIN3A-204ENST00000562776 CC2D2AQ9P2K1 1620 aa21.73■■□□□ 1.07
SIN3A-204ENST00000562776 EIF4G1Q04637 1599 aaKnown RBP21.7■■□□□ 1.06
SIN3A-204ENST00000562776 CECR2Q9BXF3 1484 aa21.68■■□□□ 1.06
SIN3A-204ENST00000562776 NCAPD3P42695 1498 aa21.1■□□□□ 0.97
SIN3A-204ENST00000562776 ATAD2BQ9ULI0 1458 aa20.99■□□□□ 0.95
SIN3A-204ENST00000562776 SMARCA2P51531 1590 aa20.92■□□□□ 0.94
SIN3A-204ENST00000562776 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
SIN3A-204ENST00000562776 HMGXB3Q12766 1538 aa20.88■□□□□ 0.93
SIN3A-204ENST00000562776 BAZ1AQ9NRL2 1556 aaPredicted RBP20.85■□□□□ 0.93
SIN3A-204ENST00000562776 DNAJC5Q9H3Z4 198 aa20.8■□□□□ 0.92
SIN3A-204ENST00000562776 PEG3Q9GZU2 1588 aa20.8■□□□□ 0.92
SIN3A-204ENST00000562776 CUX2O14529 1486 aa20.77■□□□□ 0.92
SIN3A-204ENST00000562776 ERCC6Q03468 1493 aa20.74■□□□□ 0.91
SIN3A-204ENST00000562776 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
SIN3A-204ENST00000562776 MROH2BQ7Z745 1585 aa20.68■□□□□ 0.9
SIN3A-204ENST00000562776 NESP48681 1621 aa20.64■□□□□ 0.9
SIN3A-204ENST00000562776 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
SIN3A-204ENST00000562776 PDS5BQ9NTI5 1447 aa20.46■□□□□ 0.87
SIN3A-204ENST00000562776 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
SIN3A-204ENST00000562776 WIZO95785 1651 aa20.43■□□□□ 0.86
SIN3A-204ENST00000562776 CADPSQ9ULU8 1353 aa20.43■□□□□ 0.86
SIN3A-204ENST00000562776 RSF1Q96T23 1441 aaPredicted RBP20.39■□□□□ 0.85
SIN3A-204ENST00000562776 KIF21AQ7Z4S6 1674 aa20.35■□□□□ 0.85
SIN3A-204ENST00000562776 MRC2Q9UBG0 1479 aa20.24■□□□□ 0.83
SIN3A-204ENST00000562776 TOP2AP11388 1531 aaKnown RBP20.24■□□□□ 0.83
SIN3A-204ENST00000562776 WDR62O43379 1518 aa20.21■□□□□ 0.83
SIN3A-204ENST00000562776 CFTRP13569 1480 aa20.2■□□□□ 0.82
SIN3A-204ENST00000562776 FANCD2Q9BXW9 1451 aa20.15■□□□□ 0.82
SIN3A-204ENST00000562776 CEP164Q9UPV0 1460 aa20.15■□□□□ 0.82
SIN3A-204ENST00000562776 CCDC88BA6NC98 1476 aa19.98■□□□□ 0.79
SIN3A-204ENST00000562776 URB2Q14146 1524 aaKnown RBP19.97■□□□□ 0.79
SIN3A-204ENST00000562776 PRDM2Q13029 1718 aa19.89■□□□□ 0.77
SIN3A-204ENST00000562776 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
SIN3A-204ENST00000562776 IFT140Q96RY7 1462 aa19.79■□□□□ 0.76
SIN3A-204ENST00000562776 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
SIN3A-204ENST00000562776 TOPBP1Q92547 1522 aa19.76■□□□□ 0.75
SIN3A-204ENST00000562776 SUPT5HO00267 1087 aaKnown RBP19.75■□□□□ 0.75
SIN3A-204ENST00000562776 TRIM41Q8WV44 630 aa19.75■□□□□ 0.75
SIN3A-204ENST00000562776 ZNF608Q9ULD9 1512 aaPredicted RBP19.71■□□□□ 0.75
SIN3A-204ENST00000562776 DNMBPQ6XZF7 1577 aa19.69■□□□□ 0.74
SIN3A-204ENST00000562776 TARBP1Q13395 1621 aaKnown RBP19.59■□□□□ 0.73
SIN3A-204ENST00000562776 EIF4G3O43432 1585 aaKnown RBP19.57■□□□□ 0.72
SIN3A-204ENST00000562776 POLA1P09884 1462 aaPredicted RBP19.56■□□□□ 0.72
SIN3A-204ENST00000562776 AQRO60306 1485 aaKnown RBP eCLIP19.55■□□□□ 0.72
SIN3A-204ENST00000562776 SOGA1O94964 1423 aa19.51■□□□□ 0.71
SIN3A-204ENST00000562776 RIMBP3CA6NJZ7 1639 aa19.5■□□□□ 0.71
SIN3A-204ENST00000562776 RIMBP3BA6NNM3 1639 aa19.5■□□□□ 0.71
SIN3A-204ENST00000562776 RIMBP3Q9UFD9 1639 aa19.5■□□□□ 0.71
SIN3A-204ENST00000562776 RAD54L2Q9Y4B4 1467 aa19.48■□□□□ 0.71
SIN3A-204ENST00000562776 ARHGEF11O15085 1522 aa19.46■□□□□ 0.71
SIN3A-204ENST00000562776 TDRD9Q8NDG6 1382 aaKnown RBP19.44■□□□□ 0.7
SIN3A-204ENST00000562776 WDR97A6NE52 1622 aa19.43■□□□□ 0.7
SIN3A-204ENST00000562776 FGD5Q6ZNL6 1462 aa19.43■□□□□ 0.7
SIN3A-204ENST00000562776 CUX1P39880 1505 aa19.41■□□□□ 0.7
SIN3A-204ENST00000562776 CHD1O14646 1710 aa19.39■□□□□ 0.7
SIN3A-204ENST00000562776 FBLN2P98095 1184 aa19.38■□□□□ 0.69
SIN3A-204ENST00000562776 CYB5RLQ6IPT4 315 aa19.34■□□□□ 0.69
SIN3A-204ENST00000562776 GRIN2BQ13224 1484 aa19.33■□□□□ 0.68
SIN3A-204ENST00000562776 MAGI1Q96QZ7 1491 aaPredicted RBP19.33■□□□□ 0.68
SIN3A-204ENST00000562776 SNAPC4Q5SXM2 1469 aa19.32■□□□□ 0.68
SIN3A-204ENST00000562776 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
SIN3A-204ENST00000562776 ARAP1Q96P48 1450 aa19.27■□□□□ 0.67
SIN3A-204ENST00000562776 SYNJ2O15056 1496 aa19.26■□□□□ 0.67
SIN3A-204ENST00000562776 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
SIN3A-204ENST00000562776 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
SIN3A-204ENST00000562776 GAPVD1Q14C86 1478 aa19.25■□□□□ 0.67
SIN3A-204ENST00000562776 WRNQ14191 1432 aaPredicted RBP eCLIP19.24■□□□□ 0.67
SIN3A-204ENST00000562776 SYNJ1O43426 1573 aa19.23■□□□□ 0.67
SIN3A-204ENST00000562776 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
SIN3A-204ENST00000562776 BIVM-ERCC5R4GMW8 1640 aa19.22■□□□□ 0.67
SIN3A-204ENST00000562776 ABCA5Q8WWZ7 1642 aa19.18■□□□□ 0.66
SIN3A-204ENST00000562776 PBRM1Q86U86 1689 aa19.16■□□□□ 0.66
SIN3A-204ENST00000562776 TRHP20396 242 aaPredicted RBP19.08■□□□□ 0.64
SIN3A-204ENST00000562776 GRIN2AQ12879 1464 aa19.06■□□□□ 0.64
SIN3A-204ENST00000562776 FHAD1B1AJZ9 1412 aa19.03■□□□□ 0.64
SIN3A-204ENST00000562776 NUP160Q12769 1436 aa19.03■□□□□ 0.64
SIN3A-204ENST00000562776 ADAMTS12P58397 1594 aa19.02■□□□□ 0.63
SIN3A-204ENST00000562776 ERICH3Q5RHP9 1530 aa19.01■□□□□ 0.63
SIN3A-204ENST00000562776 CEP170Q5SW79 1584 aa18.97■□□□□ 0.63
SIN3A-204ENST00000562776 SHROOM2Q13796 1616 aa18.92■□□□□ 0.62
SIN3A-204ENST00000562776 ERCC6L2Q5T890 1561 aa18.91■□□□□ 0.62
SIN3A-204ENST00000562776 JPH4Q96JJ6 628 aa18.86■□□□□ 0.61
SIN3A-204ENST00000562776 KIF27Q86VH2 1401 aa18.83■□□□□ 0.61
SIN3A-204ENST00000562776 PRG4Q92954 1404 aaPredicted RBP18.82■□□□□ 0.6
SIN3A-204ENST00000562776 IGF1RP08069 1367 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms