Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 CASC19-226ENST00000641392 1832 nt8.64□□□□□ -1.034e-16■■■■□ 24.4
U2AF2P26368 CASC19-210ENST00000641073 1065 nt8.56□□□□□ -1.044e-16■■■■□ 24.4
U2AF2P26368 CASC19-219ENST00000641262 832 nt8.56□□□□□ -1.044e-16■■■■□ 24.4
U2AF2P26368 CASC19-277ENST00000642082 1545 nt6.91□□□□□ -1.34e-16■■■■□ 24.4
U2AF2P26368 CASC19-242ENST00000641584 2114 nt5.53□□□□□ -1.524e-16■■■■□ 24.4
U2AF2P26368 CASC19-278ENST00000642088 2091 nt4.87□□□□□ -1.634e-16■■■■□ 24.4
U2AF2P26368 CASC19-271ENST00000641968 842 nt4.52□□□□□ -1.694e-16■■■■□ 24.4
U2AF2P26368 CASC19-202ENST00000521815 561 ntTSL 33.73□□□□□ -1.814e-16■■■■□ 24.4
U2AF2P26368 NDUFS4-203ENST00000506765 559 ntTSL 212.55□□□□□ -0.41e-6■■■■□ 24.4
U2AF2P26368 NDUFS4-204ENST00000506974 833 ntTSL 1 (best)11.44□□□□□ -0.581e-6■■■■□ 24.4
U2AF2P26368 NDUFS4-201ENST00000296684 675 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.641e-6■■■■□ 24.4
U2AF2P26368 NDUFS4-202ENST00000502423 562 ntTSL 510.66□□□□□ -0.71e-6■■■■□ 24.4
U2AF2P26368 NDUFS4-205ENST00000507026 680 ntTSL 39.62□□□□□ -0.871e-6■■■■□ 24.4
U2AF2P26368 BRD2-207ENST00000463639 946 ntTSL 26.55□□□□□ -1.369e-23■■■■□ 24.4
U2AF2P26368 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.87■□□□□ 0.775e-7■■■■□ 24.4
U2AF2P26368 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.33■□□□□ 0.685e-7■■■■□ 24.4
U2AF2P26368 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.545e-7■■■■□ 24.4
U2AF2P26368 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.01■□□□□ 0.475e-7■■■■□ 24.4
U2AF2P26368 CENPM-206ENST00000407253 818 ntTSL 2 BASIC18.01■□□□□ 0.475e-7■■■■□ 24.4
U2AF2P26368 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC16.92■□□□□ 0.35e-7■■■■□ 24.4
U2AF2P26368 UBR4-206ENST00000419533 5583 ntTSL 59.19□□□□□ -0.947e-8■■■■□ 24.4
U2AF2P26368 DONSON-205ENST00000437395 1719 ntTSL 526.68■■□□□ 1.864e-8■■■■□ 24.4
U2AF2P26368 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC26.1■■□□□ 1.774e-8■■■■□ 24.4
U2AF2P26368 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.734e-8■■■■□ 24.4
U2AF2P26368 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.73■■□□□ 1.714e-8■■■■□ 24.4
U2AF2P26368 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC25.68■■□□□ 1.74e-8■■■■□ 24.4
U2AF2P26368 DONSON-203ENST00000417871 1820 ntTSL 525.55■■□□□ 1.684e-8■■■■□ 24.4
U2AF2P26368 DONSON-211ENST00000457359 2273 ntTSL 523.62■■□□□ 1.374e-8■■■■□ 24.4
U2AF2P26368 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.054e-8■■■■□ 24.4
U2AF2P26368 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.174e-8■■■■□ 24.4
U2AF2P26368 AKAP9-213ENST00000491695 1389 ntTSL 1 (best)8.76□□□□□ -1.014e-8■■■■□ 24.4
U2AF2P26368 DONSON-209ENST00000444517 1180 ntTSL 1 (best)6.03□□□□□ -1.444e-8■■■■□ 24.4
U2AF2P26368 DONSON-207ENST00000440810 703 ntTSL 55.92□□□□□ -1.464e-8■■■■□ 24.4
U2AF2P26368 LRPPRC-207ENST00000467058 557 ntTSL 34.75□□□□□ -1.654e-8■■■■□ 24.4
U2AF2P26368 DONSON-208ENST00000442660 1566 ntTSL 1 (best)4.27□□□□□ -1.734e-8■■■■□ 24.4
U2AF2P26368 DONSON-212ENST00000460557 786 ntTSL 21.81□□□□□ -2.124e-8■■■■□ 24.4
U2AF2P26368 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.08■□□□□ 0.481e-323■■■■□ 24.4
U2AF2P26368 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.97■■■□□ 2.072e-7■■■■□ 24.4
U2AF2P26368 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC21.3■■□□□ 12e-7■■■■□ 24.4
U2AF2P26368 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.872e-7■■■■□ 24.4
U2AF2P26368 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC19.64■□□□□ 0.732e-7■■■■□ 24.4
U2AF2P26368 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC18.46■□□□□ 0.552e-7■■■■□ 24.4
U2AF2P26368 PMS1-201ENST00000342075 3012 ntTSL 215.97■□□□□ 0.152e-7■■■■□ 24.4
U2AF2P26368 PMS1-204ENST00000409823 2795 ntTSL 5 BASIC14.43□□□□□ -0.12e-7■■■■□ 24.4
U2AF2P26368 PMS1-217ENST00000450931 2817 ntTSL 27.1□□□□□ -1.272e-7■■■■□ 24.4
U2AF2P26368 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.61□□□□□ -1.832e-7■■■■□ 24.4
U2AF2P26368 PMS1-209ENST00000424059 2004 ntTSL 1 (best)3.09□□□□□ -1.912e-7■■■■□ 24.4
U2AF2P26368 DDX39B-217ENST00000474961 974 ntTSL 210.9□□□□□ -0.666e-25■■■■□ 24.4
U2AF2P26368 DDX39B-218ENST00000478365 439 ntTSL 28.92□□□□□ -0.986e-25■■■■□ 24.4
U2AF2P26368 MBD6-202ENST00000546632 607 ntTSL 224.45■■□□□ 1.56e-6■■■■□ 24.4
U2AF2P26368 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.456e-6■■■■□ 24.4
U2AF2P26368 MBD6-210ENST00000549623 544 ntTSL 423.61■■□□□ 1.375e-6■■■■□ 24.4
U2AF2P26368 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.156e-6■■■■□ 24.4
U2AF2P26368 CDC42BPB-208ENST00000561271 572 ntTSL 319.12■□□□□ 0.656e-6■■■■□ 24.4
U2AF2P26368 MBD6-213ENST00000552255 509 ntTSL 418.22■□□□□ 0.516e-6■■■■□ 24.4
U2AF2P26368 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.2■□□□□ 0.56e-6■■■■□ 24.4
U2AF2P26368 FAM126B-205ENST00000453765 536 ntTSL 418.08■□□□□ 0.486e-6■■■■□ 24.4
U2AF2P26368 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.24■□□□□ 0.356e-6■■■■□ 24.4
U2AF2P26368 MBD6-209ENST00000549231 538 ntTSL 417.09■□□□□ 0.336e-6■■■■□ 24.4
U2AF2P26368 MBD6-207ENST00000548887 568 ntTSL 416.41■□□□□ 0.225e-6■■■■□ 24.4
U2AF2P26368 FAM126B-203ENST00000446678 522 ntTSL 315.86■□□□□ 0.136e-6■■■■□ 24.4
U2AF2P26368 MBD6-211ENST00000551351 532 ntTSL 415.41■□□□□ 0.066e-6■■■■□ 24.4
U2AF2P26368 CDC42BPB-202ENST00000558321 528 ntTSL 313.75□□□□□ -0.216e-6■■■■□ 24.4
U2AF2P26368 MBD6-203ENST00000546805 596 ntTSL 513.38□□□□□ -0.275e-6■■■■□ 24.4
U2AF2P26368 FAM126B-201ENST00000286181 4778 ntTSL 1 (best)12.02□□□□□ -0.486e-6■■■■□ 24.4
U2AF2P26368 MBD6-208ENST00000549042 533 ntTSL 411.23□□□□□ -0.615e-6■■■■□ 24.4
U2AF2P26368 KDM4C-210ENST00000490806 793 ntTSL 311.12□□□□□ -0.638e-11■■■■□ 24.4
U2AF2P26368 KDM4C-207ENST00000466673 537 ntTSL 210.56□□□□□ -0.728e-11■■■■□ 24.4
U2AF2P26368 FAM126B-211ENST00000498780 2209 ntTSL 29.93□□□□□ -0.826e-6■■■■□ 24.4
U2AF2P26368 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.916e-6■■■■□ 24.4
U2AF2P26368 FAM118B-208ENST00000531935 1888 ntTSL 27.83□□□□□ -1.166e-6■■■■□ 24.4
U2AF2P26368 CRY1-203ENST00000549356 621 ntTSL 35.75□□□□□ -1.498e-13■■■■□ 24.4
U2AF2P26368 FAM126B-204ENST00000452799 692 ntTSL 34.54□□□□□ -1.686e-6■■■■□ 24.4
U2AF2P26368 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.716e-6■■■■□ 24.4
U2AF2P26368 FAM126B-207ENST00000485144 538 ntTSL 32.98□□□□□ -1.936e-6■■■■□ 24.4
U2AF2P26368 MARS-211ENST00000548202 796 ntTSL 216.96■□□□□ 0.319e-11■■■■□ 24.3
U2AF2P26368 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.181e-8■■■■□ 24.3
U2AF2P26368 ARHGAP12-210ENST00000497103 732 ntTSL 35.77□□□□□ -1.491e-7■■■■□ 24.3
U2AF2P26368 ZSWIM8-219ENST00000604165 582 ntTSL 522.85■■□□□ 1.256e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.34■■□□□ 1.016e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.646e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.95■□□□□ 0.626e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-205ENST00000433366 5773 ntTSL 518.22■□□□□ 0.516e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.25■□□□□ 0.356e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.156e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-212ENST00000492395 4490 ntTSL 1 (best)14□□□□□ -0.176e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-214ENST00000603187 3713 ntTSL 1 (best)13.84□□□□□ -0.196e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-217ENST00000603409 842 ntTSL 513.76□□□□□ -0.216e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-202ENST00000412198 3611 ntTSL 213.67□□□□□ -0.226e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-222ENST00000604754 3369 ntTSL 1 (best)12.96□□□□□ -0.346e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-218ENST00000603840 970 ntTSL 1 (best)10.99□□□□□ -0.656e-15■■■■□ 24.3
U2AF2P26368 ZSWIM8-215ENST00000603195 674 ntTSL 210□□□□□ -0.816e-15■■■■□ 24.3
U2AF2P26368 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.85■□□□□ 0.933e-20■■■■□ 24.3
U2AF2P26368 CHTOP-206ENST00000495554 2553 ntTSL 217.12■□□□□ 0.333e-20■■■■□ 24.3
U2AF2P26368 MARK3-208ENST00000554627 1571 ntTSL 211.04□□□□□ -0.646e-14■■■■□ 24.3
U2AF2P26368 MARK3-218ENST00000559274 1053 ntTSL 210.32□□□□□ -0.766e-14■■■■□ 24.3
U2AF2P26368 MAPK1IP1L-205ENST00000622254 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.643e-12■■■■□ 24.3
U2AF2P26368 MAPK1IP1L-203ENST00000554364 565 ntTSL 29.99□□□□□ -0.813e-12■■■■□ 24.3
U2AF2P26368 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.183e-12■■■■□ 24.3
U2AF2P26368 VDAC1-207ENST00000492324 635 ntTSL 214.98□□□□□ -0.013e-9■■■■□ 24.3
Retrieved 100 of 36,523 protein–RNA pairs in 389.5 ms