RNA–Protein interactions for RNA: ENST00000603409.5

ZSWIM8-217, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 5

Gene ZSWIM8, Length 842 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-217ENST00000603409 NISCHQ9Y2I1 1504 aa29.62■■■□□ 2.33
ZSWIM8-217ENST00000603409 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
ZSWIM8-217ENST00000603409 ABCC9O60706 1549 aa25.76■■□□□ 1.71
ZSWIM8-217ENST00000603409 RB1CC1Q8TDY2 1594 aa24.82■■□□□ 1.56
ZSWIM8-217ENST00000603409 NACADO15069 1562 aa24.81■■□□□ 1.56
ZSWIM8-217ENST00000603409 DCAF8L2P0C7V8 631 aa24.77■■□□□ 1.56
ZSWIM8-217ENST00000603409 MYO15BQ96JP2 1530 aa24.7■■□□□ 1.54
ZSWIM8-217ENST00000603409 ZCCHC6Q5VYS8 1495 aaKnown RBP24.65■■□□□ 1.54
ZSWIM8-217ENST00000603409 DCAF1Q9Y4B6 1507 aa24.56■■□□□ 1.52
ZSWIM8-217ENST00000603409 UNC13AQ9UPW8 1703 aa24.14■■□□□ 1.45
ZSWIM8-217ENST00000603409 PABPN1Q86U42 306 aaKnown RBP eCLIP24.1■■□□□ 1.451e-6■■■■□ 24.5
ZSWIM8-217ENST00000603409 BICRAQ9NZM4 1560 aa24.03■■□□□ 1.44
ZSWIM8-217ENST00000603409 SCRIBQ14160 1630 aa23.95■■□□□ 1.42
ZSWIM8-217ENST00000603409 SHROOM4Q9ULL8 1493 aa23.88■■□□□ 1.41
ZSWIM8-217ENST00000603409 DNAJC5BQ9UF47 199 aa23.71■■□□□ 1.39
ZSWIM8-217ENST00000603409 EIF4G1Q04637 1599 aaKnown RBP23.41■■□□□ 1.34
ZSWIM8-217ENST00000603409 CC2D2AQ9P2K1 1620 aa23.3■■□□□ 1.32
ZSWIM8-217ENST00000603409 CECR2Q9BXF3 1484 aa23.19■■□□□ 1.3
ZSWIM8-217ENST00000603409 BAZ1AQ9NRL2 1556 aaPredicted RBP22.97■■□□□ 1.27
ZSWIM8-217ENST00000603409 SMARCA4P51532 1647 aa22.95■■□□□ 1.26
ZSWIM8-217ENST00000603409 NCAPD3P42695 1498 aa22.92■■□□□ 1.26
ZSWIM8-217ENST00000603409 ATAD2BQ9ULI0 1458 aa22.88■■□□□ 1.25
ZSWIM8-217ENST00000603409 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
ZSWIM8-217ENST00000603409 MROH2BQ7Z745 1585 aa22.8■■□□□ 1.24
ZSWIM8-217ENST00000603409 PEG3Q9GZU2 1588 aa22.77■■□□□ 1.24
ZSWIM8-217ENST00000603409 HMGXB3Q12766 1538 aa22.76■■□□□ 1.23
ZSWIM8-217ENST00000603409 BAZ1BQ9UIG0 1483 aaKnown RBP22.68■■□□□ 1.22
ZSWIM8-217ENST00000603409 RSF1Q96T23 1441 aaPredicted RBP22.57■■□□□ 1.2
ZSWIM8-217ENST00000603409 WIZO95785 1651 aa22.51■■□□□ 1.19
ZSWIM8-217ENST00000603409 TOP2AP11388 1531 aaKnown RBP22.31■■□□□ 1.16
ZSWIM8-217ENST00000603409 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
ZSWIM8-217ENST00000603409 NESP48681 1621 aa22.27■■□□□ 1.16
ZSWIM8-217ENST00000603409 CADPSQ9ULU8 1353 aa22.25■■□□□ 1.15
ZSWIM8-217ENST00000603409 ERCC6Q03468 1493 aa22.24■■□□□ 1.15
ZSWIM8-217ENST00000603409 PDS5BQ9NTI5 1447 aa22.17■■□□□ 1.14
ZSWIM8-217ENST00000603409 CFTRP13569 1480 aa22.09■■□□□ 1.13
ZSWIM8-217ENST00000603409 CCDC88BA6NC98 1476 aa22.07■■□□□ 1.12
ZSWIM8-217ENST00000603409 CUX2O14529 1486 aa22.06■■□□□ 1.12
ZSWIM8-217ENST00000603409 KIF21AQ7Z4S6 1674 aa21.96■■□□□ 1.11
ZSWIM8-217ENST00000603409 SUPT5HO00267 1087 aaKnown RBP21.95■■□□□ 1.1
ZSWIM8-217ENST00000603409 FANCD2Q9BXW9 1451 aa21.95■■□□□ 1.1
ZSWIM8-217ENST00000603409 THOC2Q8NI27 1593 aaKnown RBP21.93■■□□□ 1.1
ZSWIM8-217ENST00000603409 CEP164Q9UPV0 1460 aa21.92■■□□□ 1.1
ZSWIM8-217ENST00000603409 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
ZSWIM8-217ENST00000603409 WDR62O43379 1518 aa21.81■■□□□ 1.08
ZSWIM8-217ENST00000603409 PRDM2Q13029 1718 aa21.81■■□□□ 1.08
ZSWIM8-217ENST00000603409 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
ZSWIM8-217ENST00000603409 ABCC8Q09428 1581 aa21.66■■□□□ 1.06
ZSWIM8-217ENST00000603409 TOPBP1Q92547 1522 aa21.58■■□□□ 1.04
ZSWIM8-217ENST00000603409 DNMBPQ6XZF7 1577 aa21.55■■□□□ 1.04
ZSWIM8-217ENST00000603409 IFT140Q96RY7 1462 aa21.49■■□□□ 1.03
ZSWIM8-217ENST00000603409 DNAJC5Q9H3Z4 198 aa21.45■■□□□ 1.02
ZSWIM8-217ENST00000603409 POLA1P09884 1462 aaPredicted RBP21.39■■□□□ 1.02
ZSWIM8-217ENST00000603409 CUX1P39880 1505 aa21.39■■□□□ 1.01
ZSWIM8-217ENST00000603409 SOGA1O94964 1423 aa21.34■■□□□ 1.01
ZSWIM8-217ENST00000603409 ZNF608Q9ULD9 1512 aaPredicted RBP21.33■■□□□ 1
ZSWIM8-217ENST00000603409 FGD5Q6ZNL6 1462 aa21.32■■□□□ 1
ZSWIM8-217ENST00000603409 TARBP1Q13395 1621 aaKnown RBP21.32■■□□□ 1
ZSWIM8-217ENST00000603409 WRNQ14191 1432 aaPredicted RBP eCLIP21.29■■□□□ 1
ZSWIM8-217ENST00000603409 RAD54L2Q9Y4B4 1467 aa21.28■■□□□ 1
ZSWIM8-217ENST00000603409 AQRO60306 1485 aaKnown RBP eCLIP21.23■□□□□ 0.993e-7■■■■□ 21.5
ZSWIM8-217ENST00000603409 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
ZSWIM8-217ENST00000603409 EIF4G3O43432 1585 aaKnown RBP21.21■□□□□ 0.99
ZSWIM8-217ENST00000603409 TOP2BQ02880 1626 aa21.21■□□□□ 0.99
ZSWIM8-217ENST00000603409 TDRD9Q8NDG6 1382 aaKnown RBP21.2■□□□□ 0.98
ZSWIM8-217ENST00000603409 OSCARQ8IYS5 282 aa21.19■□□□□ 0.98
ZSWIM8-217ENST00000603409 BIVM-ERCC5R4GMW8 1640 aa21.18■□□□□ 0.98
ZSWIM8-217ENST00000603409 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
ZSWIM8-217ENST00000603409 SYNJ1O43426 1573 aa21.14■□□□□ 0.98
ZSWIM8-217ENST00000603409 GRIN2BQ13224 1484 aa21.09■□□□□ 0.97
ZSWIM8-217ENST00000603409 GAPVD1Q14C86 1478 aa21.08■□□□□ 0.97
ZSWIM8-217ENST00000603409 MAGI1Q96QZ7 1491 aaPredicted RBP21.05■□□□□ 0.96
ZSWIM8-217ENST00000603409 SNAPC4Q5SXM2 1469 aa21.02■□□□□ 0.96
ZSWIM8-217ENST00000603409 ABCA5Q8WWZ7 1642 aa21.01■□□□□ 0.95
ZSWIM8-217ENST00000603409 FBLN2P98095 1184 aa21.01■□□□□ 0.95
ZSWIM8-217ENST00000603409 CHMP7Q8WUX9 453 aaPredicted RBP20.99■□□□□ 0.95
ZSWIM8-217ENST00000603409 SYNJ2O15056 1496 aa20.95■□□□□ 0.94
ZSWIM8-217ENST00000603409 PBRM1Q86U86 1689 aa20.94■□□□□ 0.94
ZSWIM8-217ENST00000603409 CHD1O14646 1710 aa20.93■□□□□ 0.94
ZSWIM8-217ENST00000603409 ERICH3Q5RHP9 1530 aa20.9■□□□□ 0.94
ZSWIM8-217ENST00000603409 KIF27Q86VH2 1401 aa20.87■□□□□ 0.93
ZSWIM8-217ENST00000603409 FHAD1B1AJZ9 1412 aa20.86■□□□□ 0.93
ZSWIM8-217ENST00000603409 ADAMTS12P58397 1594 aa20.81■□□□□ 0.92
ZSWIM8-217ENST00000603409 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
ZSWIM8-217ENST00000603409 IGF1RP08069 1367 aa20.79■□□□□ 0.92
ZSWIM8-217ENST00000603409 TRIM41Q8WV44 630 aa20.78■□□□□ 0.92
ZSWIM8-217ENST00000603409 CLASP1Q7Z460 1538 aa20.77■□□□□ 0.92
ZSWIM8-217ENST00000603409 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
ZSWIM8-217ENST00000603409 NUP160Q12769 1436 aa20.73■□□□□ 0.91
ZSWIM8-217ENST00000603409 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
ZSWIM8-217ENST00000603409 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
ZSWIM8-217ENST00000603409 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
ZSWIM8-217ENST00000603409 CUL7Q14999 1698 aa20.67■□□□□ 0.9
ZSWIM8-217ENST00000603409 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
ZSWIM8-217ENST00000603409 CEP170Q5SW79 1584 aa20.65■□□□□ 0.9
ZSWIM8-217ENST00000603409 CYB5RLQ6IPT4 315 aa20.6■□□□□ 0.89
ZSWIM8-217ENST00000603409 RUSC2Q8N2Y8 1516 aa20.58■□□□□ 0.88
ZSWIM8-217ENST00000603409 ARAP1Q96P48 1450 aa20.57■□□□□ 0.88
ZSWIM8-217ENST00000603409 JPH4Q96JJ6 628 aa20.56■□□□□ 0.88
ZSWIM8-217ENST00000603409 KIAA0586Q9BVV6 1533 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms