RNA–Protein interactions for RNA: ENST00000604165.1

ZSWIM8-219, Transcript of zinc finger SWIM-type containing 8, humanhuman

TSL 5

Gene ZSWIM8, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM8-219ENST00000604165 NISCHQ9Y2I1 1504 aa52.2■■■■■ 5.95
ZSWIM8-219ENST00000604165 CCDC180Q9P1Z9 1646 aa46.87■■■■■ 5.09
ZSWIM8-219ENST00000604165 ABCC9O60706 1549 aa46.69■■■■■ 5.06
ZSWIM8-219ENST00000604165 RB1CC1Q8TDY2 1594 aa44.56■■■■■ 4.72
ZSWIM8-219ENST00000604165 NACADO15069 1562 aa44.31■■■■■ 4.68
ZSWIM8-219ENST00000604165 MYO15BQ96JP2 1530 aa43.82■■■■■ 4.61
ZSWIM8-219ENST00000604165 DCAF8L2P0C7V8 631 aa43.81■■■■■ 4.6
ZSWIM8-219ENST00000604165 DNAJC5BQ9UF47 199 aa43.79■■■■■ 4.6
ZSWIM8-219ENST00000604165 UNC13AQ9UPW8 1703 aa43.51■■■■■ 4.56
ZSWIM8-219ENST00000604165 PABPN1Q86U42 306 aaKnown RBP eCLIP43.42■■■■■ 4.54
ZSWIM8-219ENST00000604165 ZCCHC6Q5VYS8 1495 aaKnown RBP43.29■■■■■ 4.52
ZSWIM8-219ENST00000604165 BICRAQ9NZM4 1560 aa43.26■■■■■ 4.52
ZSWIM8-219ENST00000604165 DCAF1Q9Y4B6 1507 aa43.23■■■■■ 4.51
ZSWIM8-219ENST00000604165 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.45
ZSWIM8-219ENST00000604165 SCRIBQ14160 1630 aa42.56■■■■■ 4.4
ZSWIM8-219ENST00000604165 CC2D2AQ9P2K1 1620 aa42.24■■■■■ 4.35
ZSWIM8-219ENST00000604165 EIF4G1Q04637 1599 aaKnown RBP42.18■■■■■ 4.34
ZSWIM8-219ENST00000604165 CECR2Q9BXF3 1484 aa42.11■■■■■ 4.33
ZSWIM8-219ENST00000604165 NCAPD3P42695 1498 aa40.91■■■■■ 4.14
ZSWIM8-219ENST00000604165 ATAD2BQ9ULI0 1458 aa40.74■■■■■ 4.11
ZSWIM8-219ENST00000604165 SMARCA4P51532 1647 aa40.69■■■■■ 4.1
ZSWIM8-219ENST00000604165 SMARCA2P51531 1590 aa40.65■■■■■ 4.1
ZSWIM8-219ENST00000604165 HMGXB3Q12766 1538 aa40.61■■■■■ 4.09
ZSWIM8-219ENST00000604165 BAZ1AQ9NRL2 1556 aaPredicted RBP40.52■■■■■ 4.08
ZSWIM8-219ENST00000604165 PEG3Q9GZU2 1588 aa40.4■■■■■ 4.06
ZSWIM8-219ENST00000604165 CUX2O14529 1486 aa40.35■■■■■ 4.05
ZSWIM8-219ENST00000604165 ERCC6Q03468 1493 aa40.32■■■■■ 4.04
ZSWIM8-219ENST00000604165 BAZ1BQ9UIG0 1483 aaKnown RBP40.31■■■■■ 4.04
ZSWIM8-219ENST00000604165 DNAJC5Q9H3Z4 198 aa40.25■■■■■ 4.03
ZSWIM8-219ENST00000604165 MROH2BQ7Z745 1585 aa40.18■■■■■ 4.02
ZSWIM8-219ENST00000604165 NESP48681 1621 aa40.12■■■■■ 4.01
ZSWIM8-219ENST00000604165 LAMC3Q9Y6N6 1575 aa39.96■■■■□ 3.99
ZSWIM8-219ENST00000604165 THOC2Q8NI27 1593 aaKnown RBP39.79■■■■□ 3.96
ZSWIM8-219ENST00000604165 PDS5BQ9NTI5 1447 aa39.71■■■■□ 3.95
ZSWIM8-219ENST00000604165 WIZO95785 1651 aa39.66■■■■□ 3.94
ZSWIM8-219ENST00000604165 CADPSQ9ULU8 1353 aa39.63■■■■□ 3.93
ZSWIM8-219ENST00000604165 KIF21AQ7Z4S6 1674 aa39.62■■■■□ 3.93
ZSWIM8-219ENST00000604165 RSF1Q96T23 1441 aaPredicted RBP39.38■■■■□ 3.89
ZSWIM8-219ENST00000604165 MRC2Q9UBG0 1479 aa39.35■■■■□ 3.89
ZSWIM8-219ENST00000604165 WDR62O43379 1518 aa39.29■■■■□ 3.88
ZSWIM8-219ENST00000604165 TOP2AP11388 1531 aaKnown RBP39.24■■■■□ 3.87
ZSWIM8-219ENST00000604165 CFTRP13569 1480 aa39.21■■■■□ 3.87
ZSWIM8-219ENST00000604165 CEP164Q9UPV0 1460 aa39.17■■■■□ 3.86
ZSWIM8-219ENST00000604165 FANCD2Q9BXW9 1451 aa39.13■■■■□ 3.85
ZSWIM8-219ENST00000604165 URB2Q14146 1524 aaKnown RBP38.82■■■■□ 3.8
ZSWIM8-219ENST00000604165 PRDM2Q13029 1718 aa38.79■■■■□ 3.8
ZSWIM8-219ENST00000604165 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
ZSWIM8-219ENST00000604165 OSCARQ8IYS5 282 aa38.45■■■■□ 3.75
ZSWIM8-219ENST00000604165 IFT140Q96RY7 1462 aa38.44■■■■□ 3.74
ZSWIM8-219ENST00000604165 TOPBP1Q92547 1522 aa38.42■■■■□ 3.74
ZSWIM8-219ENST00000604165 ABCC8Q09428 1581 aa38.4■■■■□ 3.74
ZSWIM8-219ENST00000604165 TRIM41Q8WV44 630 aa38.32■■■■□ 3.72
ZSWIM8-219ENST00000604165 ZNF608Q9ULD9 1512 aaPredicted RBP38.3■■■■□ 3.72
ZSWIM8-219ENST00000604165 DNMBPQ6XZF7 1577 aa38.29■■■■□ 3.72
ZSWIM8-219ENST00000604165 EIF4G3O43432 1585 aaKnown RBP38.11■■■■□ 3.69
ZSWIM8-219ENST00000604165 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
ZSWIM8-219ENST00000604165 POLA1P09884 1462 aaPredicted RBP38.03■■■■□ 3.68
ZSWIM8-219ENST00000604165 AQRO60306 1485 aaKnown RBP eCLIP37.95■■■■□ 3.673e-7■■■■□ 22.4
ZSWIM8-219ENST00000604165 RIMBP3CA6NJZ7 1639 aa37.93■■■■□ 3.66
ZSWIM8-219ENST00000604165 RIMBP3BA6NNM3 1639 aa37.93■■■■□ 3.66
ZSWIM8-219ENST00000604165 RIMBP3Q9UFD9 1639 aa37.93■■■■□ 3.66
ZSWIM8-219ENST00000604165 ARHGEF11O15085 1522 aa37.84■■■■□ 3.65
ZSWIM8-219ENST00000604165 SOGA1O94964 1423 aa37.83■■■■□ 3.65
ZSWIM8-219ENST00000604165 RAD54L2Q9Y4B4 1467 aa37.83■■■■□ 3.65
ZSWIM8-219ENST00000604165 WDR97A6NE52 1622 aa37.79■■■■□ 3.64
ZSWIM8-219ENST00000604165 CHD1O14646 1710 aa37.79■■■■□ 3.64
ZSWIM8-219ENST00000604165 FGD5Q6ZNL6 1462 aa37.77■■■■□ 3.64
ZSWIM8-219ENST00000604165 CUX1P39880 1505 aa37.74■■■■□ 3.63
ZSWIM8-219ENST00000604165 TDRD9Q8NDG6 1382 aaKnown RBP37.71■■■■□ 3.63
ZSWIM8-219ENST00000604165 FBLN2P98095 1184 aa37.6■■■■□ 3.61
ZSWIM8-219ENST00000604165 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
ZSWIM8-219ENST00000604165 MAGI1Q96QZ7 1491 aaPredicted RBP37.56■■■■□ 3.6
ZSWIM8-219ENST00000604165 GRIN2BQ13224 1484 aa37.53■■■■□ 3.6
ZSWIM8-219ENST00000604165 SUPT5HO00267 1087 aaKnown RBP37.49■■■■□ 3.59
ZSWIM8-219ENST00000604165 CYB5RLQ6IPT4 315 aa37.48■■■■□ 3.59
ZSWIM8-219ENST00000604165 ARAP1Q96P48 1450 aa37.46■■■■□ 3.59
ZSWIM8-219ENST00000604165 CLASP1Q7Z460 1538 aa37.44■■■■□ 3.58
ZSWIM8-219ENST00000604165 CHMP7Q8WUX9 453 aaPredicted RBP37.42■■■■□ 3.58
ZSWIM8-219ENST00000604165 SYNJ2O15056 1496 aa37.41■■■■□ 3.58
ZSWIM8-219ENST00000604165 ABCA10Q8WWZ4 1543 aa37.41■■■■□ 3.58
ZSWIM8-219ENST00000604165 SYNJ1O43426 1573 aa37.4■■■■□ 3.58
ZSWIM8-219ENST00000604165 GAPVD1Q14C86 1478 aa37.39■■■■□ 3.58
ZSWIM8-219ENST00000604165 PBRM1Q86U86 1689 aa37.34■■■■□ 3.57
ZSWIM8-219ENST00000604165 ABCA5Q8WWZ7 1642 aa37.32■■■■□ 3.57
ZSWIM8-219ENST00000604165 WRNQ14191 1432 aaPredicted RBP eCLIP37.22■■■■□ 3.55
ZSWIM8-219ENST00000604165 BIVM-ERCC5R4GMW8 1640 aa37.19■■■■□ 3.54
ZSWIM8-219ENST00000604165 TOP2BQ02880 1626 aa37.18■■■■□ 3.54
ZSWIM8-219ENST00000604165 GRIN2AQ12879 1464 aa37.04■■■■□ 3.52
ZSWIM8-219ENST00000604165 ADAMTS12P58397 1594 aa37.02■■■■□ 3.52
ZSWIM8-219ENST00000604165 TRHP20396 242 aaPredicted RBP37■■■■□ 3.51
ZSWIM8-219ENST00000604165 NUP160Q12769 1436 aa36.96■■■■□ 3.51
ZSWIM8-219ENST00000604165 FHAD1B1AJZ9 1412 aa36.94■■■■□ 3.5
ZSWIM8-219ENST00000604165 ERICH3Q5RHP9 1530 aa36.94■■■■□ 3.5
ZSWIM8-219ENST00000604165 CEP170Q5SW79 1584 aa36.89■■■■□ 3.5
ZSWIM8-219ENST00000604165 SHROOM2Q13796 1616 aa36.8■■■■□ 3.48
ZSWIM8-219ENST00000604165 ERCC6L2Q5T890 1561 aa36.77■■■■□ 3.48
ZSWIM8-219ENST00000604165 PRG4Q92954 1404 aaPredicted RBP36.52■■■■□ 3.44
ZSWIM8-219ENST00000604165 JPH4Q96JJ6 628 aa36.52■■■■□ 3.44
ZSWIM8-219ENST00000604165 RUSC2Q8N2Y8 1516 aa36.5■■■■□ 3.43
ZSWIM8-219ENST00000604165 KIF27Q86VH2 1401 aa36.45■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms