RNA–Protein interactions for RNA: ENST00000466673.1

KDM4C-207, Transcript of lysine demethylase 4C, humanhuman

TSL 2

Gene KDM4C, Length 537 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4C-207ENST00000466673 AEBP2Q6ZN18 517 aaPredicted RBP26.88■■□□□ 1.89
KDM4C-207ENST00000466673 CHIC1Q5VXU3 224 aa25.47■■□□□ 1.67
KDM4C-207ENST00000466673 NISCHQ9Y2I1 1504 aa24.32■■□□□ 1.48
KDM4C-207ENST00000466673 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
KDM4C-207ENST00000466673 PHF23Q9BUL5 403 aaPredicted RBP22.76■■□□□ 1.23
KDM4C-207ENST00000466673 CCDC180Q9P1Z9 1646 aa21.93■■□□□ 1.1
KDM4C-207ENST00000466673 ABCC9O60706 1549 aa21.71■■□□□ 1.07
KDM4C-207ENST00000466673 FOXD1Q16676 465 aa21.5■■□□□ 1.03
KDM4C-207ENST00000466673 RB1CC1Q8TDY2 1594 aa20.76■□□□□ 0.91
KDM4C-207ENST00000466673 NACADO15069 1562 aa20.63■□□□□ 0.89
KDM4C-207ENST00000466673 MSH5O43196 834 aa20.43■□□□□ 0.86
KDM4C-207ENST00000466673 UNC13AQ9UPW8 1703 aa20.43■□□□□ 0.86
KDM4C-207ENST00000466673 MYO15BQ96JP2 1530 aa20.4■□□□□ 0.86
KDM4C-207ENST00000466673 PLPPR3Q6T4P5 718 aa20.33■□□□□ 0.85
KDM4C-207ENST00000466673 DNAJC5BQ9UF47 199 aa20.29■□□□□ 0.84
KDM4C-207ENST00000466673 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
KDM4C-207ENST00000466673 BICRAQ9NZM4 1560 aa20.21■□□□□ 0.83
KDM4C-207ENST00000466673 ZCCHC6Q5VYS8 1495 aaKnown RBP20.19■□□□□ 0.82
KDM4C-207ENST00000466673 DCAF1Q9Y4B6 1507 aa20.15■□□□□ 0.82
KDM4C-207ENST00000466673 POTEDQ86YR6 584 aa20.14■□□□□ 0.81
KDM4C-207ENST00000466673 PABPN1Q86U42 306 aaKnown RBP eCLIP20.12■□□□□ 0.81
KDM4C-207ENST00000466673 PIAS4Q8N2W9 510 aaPredicted RBP20.1■□□□□ 0.81
KDM4C-207ENST00000466673 SHROOM4Q9ULL8 1493 aa19.94■□□□□ 0.78
KDM4C-207ENST00000466673 SCRIBQ14160 1630 aa19.87■□□□□ 0.77
KDM4C-207ENST00000466673 PPP6R1Q9UPN7 881 aa19.82■□□□□ 0.76
KDM4C-207ENST00000466673 ADRA2BP18089 450 aa19.77■□□□□ 0.76
KDM4C-207ENST00000466673 CC2D2AQ9P2K1 1620 aa19.69■□□□□ 0.74
KDM4C-207ENST00000466673 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
KDM4C-207ENST00000466673 CECR2Q9BXF3 1484 aa19.56■□□□□ 0.72
KDM4C-207ENST00000466673 NCAPD3P42695 1498 aa19.02■□□□□ 0.63
KDM4C-207ENST00000466673 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
KDM4C-207ENST00000466673 ATAD2BQ9ULI0 1458 aa18.95■□□□□ 0.62
KDM4C-207ENST00000466673 HMGXB3Q12766 1538 aa18.94■□□□□ 0.62
KDM4C-207ENST00000466673 SMARCA2P51531 1590 aa18.93■□□□□ 0.62
KDM4C-207ENST00000466673 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
KDM4C-207ENST00000466673 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
KDM4C-207ENST00000466673 CUX2O14529 1486 aa18.76■□□□□ 0.59
KDM4C-207ENST00000466673 BAZ1BQ9UIG0 1483 aaKnown RBP18.75■□□□□ 0.59
KDM4C-207ENST00000466673 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
KDM4C-207ENST00000466673 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
KDM4C-207ENST00000466673 NESP48681 1621 aa18.69■□□□□ 0.58
KDM4C-207ENST00000466673 LAMC3Q9Y6N6 1575 aa18.63■□□□□ 0.57
KDM4C-207ENST00000466673 DNAJC5Q9H3Z4 198 aa18.61■□□□□ 0.57
KDM4C-207ENST00000466673 THOC2Q8NI27 1593 aaKnown RBP18.6■□□□□ 0.57
KDM4C-207ENST00000466673 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
KDM4C-207ENST00000466673 WIZO95785 1651 aa18.54■□□□□ 0.56
KDM4C-207ENST00000466673 PDS5BQ9NTI5 1447 aa18.41■□□□□ 0.54
KDM4C-207ENST00000466673 SCAF1Q9H7N4 1312 aaKnown RBP18.4■□□□□ 0.54
KDM4C-207ENST00000466673 CADPSQ9ULU8 1353 aa18.38■□□□□ 0.53
KDM4C-207ENST00000466673 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
KDM4C-207ENST00000466673 WDR62O43379 1518 aa18.32■□□□□ 0.52
KDM4C-207ENST00000466673 RSF1Q96T23 1441 aaPredicted RBP18.32■□□□□ 0.52
KDM4C-207ENST00000466673 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
KDM4C-207ENST00000466673 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
KDM4C-207ENST00000466673 CFTRP13569 1480 aa18.24■□□□□ 0.51
KDM4C-207ENST00000466673 CEP164Q9UPV0 1460 aa18.23■□□□□ 0.51
KDM4C-207ENST00000466673 PRDM2Q13029 1718 aa18.23■□□□□ 0.51
KDM4C-207ENST00000466673 FANCD2Q9BXW9 1451 aa18.2■□□□□ 0.5
KDM4C-207ENST00000466673 MAPK8IP2Q13387 824 aaPredicted RBP18.18■□□□□ 0.5
KDM4C-207ENST00000466673 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.49
KDM4C-207ENST00000466673 CCDC88BA6NC98 1476 aa18.03■□□□□ 0.48
KDM4C-207ENST00000466673 TOPBP1Q92547 1522 aa17.89■□□□□ 0.45
KDM4C-207ENST00000466673 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
KDM4C-207ENST00000466673 DNMBPQ6XZF7 1577 aa17.86■□□□□ 0.45
KDM4C-207ENST00000466673 ABCC8Q09428 1581 aa17.84■□□□□ 0.45
KDM4C-207ENST00000466673 ZNF608Q9ULD9 1512 aaPredicted RBP17.82■□□□□ 0.44
KDM4C-207ENST00000466673 EIF4G3O43432 1585 aaKnown RBP17.82■□□□□ 0.44
KDM4C-207ENST00000466673 TARBP1Q13395 1621 aaKnown RBP17.8■□□□□ 0.44
KDM4C-207ENST00000466673 OSCARQ8IYS5 282 aa17.76■□□□□ 0.43
KDM4C-207ENST00000466673 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
KDM4C-207ENST00000466673 TRIM41Q8WV44 630 aa17.71■□□□□ 0.43
KDM4C-207ENST00000466673 CHD1O14646 1710 aa17.7■□□□□ 0.42
KDM4C-207ENST00000466673 RIMBP3CA6NJZ7 1639 aa17.7■□□□□ 0.42
KDM4C-207ENST00000466673 RIMBP3BA6NNM3 1639 aa17.7■□□□□ 0.42
KDM4C-207ENST00000466673 RIMBP3Q9UFD9 1639 aa17.7■□□□□ 0.42
KDM4C-207ENST00000466673 PPP4R3CPQ6ZMV5 832 aa17.69■□□□□ 0.42
KDM4C-207ENST00000466673 WDR97A6NE52 1622 aa17.64■□□□□ 0.41
KDM4C-207ENST00000466673 AQRO60306 1485 aaKnown RBP eCLIP17.63■□□□□ 0.41
KDM4C-207ENST00000466673 ARHGEF11O15085 1522 aa17.62■□□□□ 0.41
KDM4C-207ENST00000466673 CUX1P39880 1505 aa17.61■□□□□ 0.41
KDM4C-207ENST00000466673 FGD5Q6ZNL6 1462 aa17.59■□□□□ 0.41
KDM4C-207ENST00000466673 RAD54L2Q9Y4B4 1467 aa17.59■□□□□ 0.41
KDM4C-207ENST00000466673 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
KDM4C-207ENST00000466673 CACNB1Q02641 598 aaPredicted RBP17.56■□□□□ 0.4
KDM4C-207ENST00000466673 SOGA1O94964 1423 aa17.55■□□□□ 0.4
KDM4C-207ENST00000466673 DCAF8L1A6NGE4 600 aa17.51■□□□□ 0.39
KDM4C-207ENST00000466673 PBRM1Q86U86 1689 aa17.51■□□□□ 0.39
KDM4C-207ENST00000466673 CNKSR2Q8WXI2 1034 aa17.5■□□□□ 0.39
KDM4C-207ENST00000466673 SNAPC4Q5SXM2 1469 aa17.5■□□□□ 0.39
KDM4C-207ENST00000466673 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
KDM4C-207ENST00000466673 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
KDM4C-207ENST00000466673 MAGI1Q96QZ7 1491 aaPredicted RBP17.47■□□□□ 0.39
KDM4C-207ENST00000466673 ABCA5Q8WWZ7 1642 aa17.46■□□□□ 0.39
KDM4C-207ENST00000466673 GRIN2BQ13224 1484 aa17.44■□□□□ 0.38
KDM4C-207ENST00000466673 ARAP1Q96P48 1450 aa17.44■□□□□ 0.38
KDM4C-207ENST00000466673 SYNJ1O43426 1573 aa17.42■□□□□ 0.38
KDM4C-207ENST00000466673 BIVM-ERCC5R4GMW8 1640 aa17.41■□□□□ 0.38
KDM4C-207ENST00000466673 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
KDM4C-207ENST00000466673 ABCA10Q8WWZ4 1543 aa17.41■□□□□ 0.38
KDM4C-207ENST00000466673 SYNJ2O15056 1496 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms